data_1IQI # _model_server_result.job_id An-vDCoJ3FA1m-h4jmZOPw _model_server_result.datetime_utc '2024-12-22 06:23:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iqi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 1IQI # _exptl.entry_id 1IQI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 529.051 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL] METHYL]-2-PIPERAZINECARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IQI _cell.length_a 72.36 _cell.length_b 78.23 _cell.length_c 56.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IQI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 89 L CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf6 B SG CYS 46 L CYS 89 1_555 B SG CYS 57 L CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf7 B SG CYS 53 L CYS 96 1_555 B SG CYS 66 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf8 B SG CYS 68 L CYS 111 1_555 B SG CYS 81 L CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc1 A O ASN 58 A ASN 72 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.905 ? metalc ? metalc2 A OE2 GLU 66 A GLU 80 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.971 ? # _chem_comp.formula 'C26 H29 Cl N4 O4 S' _chem_comp.formula_weight 529.051 _chem_comp.id XMG _chem_comp.mon_nstd_flag . _chem_comp.name '4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL] METHYL]-2-PIPERAZINECARBOXYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N9 XMG sing 374 n n C1 C32 XMG sing 375 n n C1 H11A XMG sing 376 n n C1 H12 XMG sing 377 n n S2 O3 XMG doub 378 n n S2 N6 XMG sing 379 n n S2 O10 XMG doub 380 n n S2 C12 XMG sing 381 n n C4 C5 XMG sing 382 n n C4 N9 XMG sing 383 n n C4 H41 XMG sing 384 n n C4 H42 XMG sing 385 n n C5 N6 XMG sing 386 n n C5 H51 XMG sing 387 n n C5 H52 XMG sing 388 n n N6 C8 XMG sing 389 n n C7 C8 XMG sing 390 n n C7 N9 XMG sing 391 n n C7 C22 XMG sing 392 n n C7 H7 XMG sing 393 n n C8 H81 XMG sing 394 n n C8 H82 XMG sing 395 n n C11 C12 XMG sing 396 n y C11 C16 XMG doub 397 n y C11 H11 XMG sing 398 n n C12 C15 XMG doub 399 n y C13 C14 XMG doub 400 n y C13 C16 XMG sing 401 n y C13 C19 XMG sing 402 n y C14 C15 XMG sing 403 n y C14 H14 XMG sing 404 n n C15 H15 XMG sing 405 n n C16 C18 XMG sing 406 n y CL17 C21 XMG sing 407 n n C18 C20 XMG doub 408 n y C18 H18 XMG sing 409 n n C19 C21 XMG doub 410 n y C19 H19 XMG sing 411 n n C20 C21 XMG sing 412 n y C20 H20 XMG sing 413 n n C22 O23 XMG doub 414 n n C22 O24 XMG sing 415 n n O24 H24 XMG sing 416 n n C25 C28 XMG doub 417 n y C25 N34 XMG sing 418 n y C25 H25 XMG sing 419 n n N26 C27 XMG sing 420 n n N26 C29 XMG sing 421 n n N26 C31 XMG sing 422 n n C27 C28 XMG sing 423 n y C27 C30 XMG doub 424 n y C28 H28 XMG sing 425 n n C29 C33 XMG sing 426 n n C29 H291 XMG sing 427 n n C29 H292 XMG sing 428 n n C30 C35 XMG sing 429 n y C30 H30 XMG sing 430 n n C31 C36 XMG sing 431 n n C31 H311 XMG sing 432 n n C31 H312 XMG sing 433 n n C32 C33 XMG sing 434 n n C32 C36 XMG sing 435 n n C32 H32 XMG sing 436 n n C33 H331 XMG sing 437 n n C33 H332 XMG sing 438 n n N34 C35 XMG doub 439 n y C35 H35 XMG sing 440 n n C36 H361 XMG sing 441 n n C36 H362 XMG sing 442 n n # _atom_sites.entry_id 1IQI _atom_sites.fract_transf_matrix[1][1] 0.01382 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012783 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017756 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 301 301 CA CA . D 4 XMG A 1 401 401 XMG XMG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XMG . . . D 4 4.555 20.755 5.182 1 28.73 ? C1 XMG 401 A 1 HETATM 2 S S2 XMG . . . D 4 9.486 23.943 5.742 1 25.99 ? S2 XMG 401 A 1 HETATM 3 O O3 XMG . . . D 4 9.776 25.254 4.987 1 31.83 ? O3 XMG 401 A 1 HETATM 4 C C4 XMG . . . D 4 5.71 22.915 4.729 1 25.46 ? C4 XMG 401 A 1 HETATM 5 C C5 XMG . . . D 4 6.908 23.804 5.113 1 23.01 ? C5 XMG 401 A 1 HETATM 6 N N6 XMG . . . D 4 8.174 23.076 5.128 1 22.51 ? N6 XMG 401 A 1 HETATM 7 C C7 XMG . . . D 4 7.007 20.927 5.669 1 26.31 ? C7 XMG 401 A 1 HETATM 8 C C8 XMG . . . D 4 8.094 21.897 5.952 1 25.88 ? C8 XMG 401 A 1 HETATM 9 N N9 XMG . . . D 4 5.702 21.633 5.501 1 23.71 ? N9 XMG 401 A 1 HETATM 10 O O10 XMG . . . D 4 10.579 22.905 5.636 1 23.26 ? O10 XMG 401 A 1 HETATM 11 C C11 XMG . . . D 4 8.337 25.406 7.727 1 21.49 ? C11 XMG 401 A 1 HETATM 12 C C12 XMG . . . D 4 9.093 24.256 7.374 1 23.73 ? C12 XMG 401 A 1 HETATM 13 C C13 XMG . . . D 4 8.513 24.658 10.139 1 15.93 ? C13 XMG 401 A 1 HETATM 14 C C14 XMG . . . D 4 9.272 23.507 9.753 1 20.7 ? C14 XMG 401 A 1 HETATM 15 C C15 XMG . . . D 4 9.551 23.319 8.407 1 20.04 ? C15 XMG 401 A 1 HETATM 16 C C16 XMG . . . D 4 8.022 25.653 9.079 1 15.48 ? C16 XMG 401 A 1 HETATM 17 CL CL17 XMG . . . D 4 7.174 26.199 13.555 1 38.36 ? CL17 XMG 401 A 1 HETATM 18 C C18 XMG . . . D 4 7.253 26.814 9.509 1 16.71 ? C18 XMG 401 A 1 HETATM 19 C C19 XMG . . . D 4 8.21 24.893 11.485 1 21.12 ? C19 XMG 401 A 1 HETATM 20 C C20 XMG . . . D 4 6.989 26.987 10.896 1 21.03 ? C20 XMG 401 A 1 HETATM 21 C C21 XMG . . . D 4 7.472 26.019 11.875 1 22.01 ? C21 XMG 401 A 1 HETATM 22 C C22 XMG . . . D 4 7.151 20.3 7.111 1 39.25 ? C22 XMG 401 A 1 HETATM 23 O O23 XMG . . . D 4 6.674 21.078 7.991 1 44.71 ? O23 XMG 401 A 1 HETATM 24 O O24 XMG . . . D 4 8.176 19.582 7.264 1 44.66 ? O24 XMG 401 A 1 HETATM 25 C C25 XMG . . . D 4 -0.195 17.153 10.07 1 37.83 ? C25 XMG 401 A 1 HETATM 26 N N26 XMG . . . D 4 2.753 17.669 7.65 1 37.74 ? N26 XMG 401 A 1 HETATM 27 C C27 XMG . . . D 4 1.508 17.163 8.246 1 37.1 ? C27 XMG 401 A 1 HETATM 28 C C28 XMG . . . D 4 1.019 17.68 9.529 1 35.34 ? C28 XMG 401 A 1 HETATM 29 C C29 XMG . . . D 4 3.289 17.148 6.318 1 37.13 ? C29 XMG 401 A 1 HETATM 30 C C30 XMG . . . D 4 0.71 16.118 7.581 1 40.02 ? C30 XMG 401 A 1 HETATM 31 C C31 XMG . . . D 4 3.577 18.736 8.338 1 37.56 ? C31 XMG 401 A 1 HETATM 32 C C32 XMG . . . D 4 3.851 19.648 5.928 1 32.14 ? C32 XMG 401 A 1 HETATM 33 C C33 XMG . . . D 4 4.097 18.171 5.462 1 37.82 ? C33 XMG 401 A 1 HETATM 34 N N34 XMG . . . D 4 -0.935 16.171 9.435 1 38.16 ? N34 XMG 401 A 1 HETATM 35 C C35 XMG . . . D 4 -0.489 15.666 8.216 1 37.2 ? C35 XMG 401 A 1 HETATM 36 C C36 XMG . . . D 4 4.205 19.821 7.435 1 36.85 ? C36 XMG 401 A 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 36 #