data_1IQN # _model_server_result.job_id Zu7DNHm3IgTaHxr7jb-TSQ _model_server_result.datetime_utc '2025-05-23 14:02:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iqn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":401}' # _entry.id 1IQN # _exptl.entry_id 1IQN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 612.139 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[[4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-6-OXO-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]-2-PIPERAZINYL]CARBONYL]MORPHOLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IQN _cell.length_a 72.17 _cell.length_b 78.27 _cell.length_c 56.62 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IQN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 A CYS 22 1_555 A SG CYS 12 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf2 A SG CYS 27 A CYS 42 1_555 A SG CYS 43 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 108 A CYS 122 1_555 B SG CYS 89 L CYS 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf4 A SG CYS 156 A CYS 168 1_555 A SG CYS 170 A CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf5 A SG CYS 181 A CYS 191 1_555 A SG CYS 209 A CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf6 B SG CYS 46 L CYS 89 1_555 B SG CYS 57 L CYS 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf7 B SG CYS 53 L CYS 96 1_555 B SG CYS 66 L CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf8 B SG CYS 68 L CYS 111 1_555 B SG CYS 81 L CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc1 A OD1 ASP 56 A ASP 70 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? metalc ? metalc2 A O ASN 58 A ASN 72 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc3 A O GLN 61 A GLN 75 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.803 ? metalc ? metalc4 A OE1 GLU 66 A GLU 80 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.743 ? metalc ? metalc5 C CA CA . A CA 301 1_555 E O HOH . A HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.973 ? # _chem_comp.formula 'C30 H34 Cl N5 O5 S' _chem_comp.formula_weight 612.139 _chem_comp.id XMC _chem_comp.mon_nstd_flag . _chem_comp.name 4-[[4-[(6-CHLORO-2-NAPHTHALENYL)SULFONYL]-6-OXO-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]-2-PIPERAZINYL]CARBONYL]MORPHOLINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 XMC sing 376 n y C1 C6 XMC doub 377 n y C1 H1 XMC sing 378 n n C2 C5 XMC doub 379 n y C2 S12 XMC sing 380 n n C3 C4 XMC doub 381 n y C3 C6 XMC sing 382 n y C3 C9 XMC sing 383 n y C4 C5 XMC sing 384 n y C4 H4 XMC sing 385 n n C5 H5 XMC sing 386 n n C6 C8 XMC sing 387 n y CL7 C11 XMC sing 388 n n C8 C10 XMC doub 389 n y C8 H8 XMC sing 390 n n C9 C11 XMC doub 391 n y C9 H9 XMC sing 392 n n C10 C11 XMC sing 393 n y C10 H10 XMC sing 394 n n S12 O13 XMC doub 395 n n S12 N17 XMC sing 396 n n S12 O29 XMC doub 397 n n C14 O15 XMC doub 398 n n C14 C16 XMC sing 399 n n C14 N28 XMC sing 400 n n C16 N17 XMC sing 401 n n C16 H161 XMC sing 402 n n C16 H162 XMC sing 403 n n N17 C27 XMC sing 404 n n C18 C19 XMC sing 405 n n C18 C27 XMC sing 406 n n C18 N28 XMC sing 407 n n C18 H18 XMC sing 408 n n C19 O20 XMC doub 409 n n C19 N21 XMC sing 410 n n N21 C22 XMC sing 411 n n N21 C25 XMC sing 412 n n C22 C23 XMC sing 413 n n C22 H221 XMC sing 414 n n C22 H222 XMC sing 415 n n C23 O24 XMC sing 416 n n C23 H231 XMC sing 417 n n C23 H232 XMC sing 418 n n O24 C26 XMC sing 419 n n C25 C26 XMC sing 420 n n C25 H251 XMC sing 421 n n C25 H252 XMC sing 422 n n C26 H261 XMC sing 423 n n C26 H262 XMC sing 424 n n C27 H271 XMC sing 425 n n C27 H272 XMC sing 426 n n N28 C30 XMC sing 427 n n C30 C38 XMC sing 428 n n C30 H301 XMC sing 429 n n C30 H302 XMC sing 430 n n C31 C34 XMC doub 431 n y C31 N40 XMC sing 432 n y C31 H31 XMC sing 433 n n N32 C33 XMC sing 434 n n N32 C35 XMC sing 435 n n N32 C37 XMC sing 436 n n C33 C34 XMC sing 437 n y C33 C36 XMC doub 438 n y C34 H34 XMC sing 439 n n C35 C39 XMC sing 440 n n C35 H351 XMC sing 441 n n C35 H352 XMC sing 442 n n C36 C41 XMC sing 443 n y C36 H36 XMC sing 444 n n C37 C42 XMC sing 445 n n C37 H371 XMC sing 446 n n C37 H372 XMC sing 447 n n C38 C39 XMC sing 448 n n C38 C42 XMC sing 449 n n C38 H38 XMC sing 450 n n C39 H391 XMC sing 451 n n C39 H392 XMC sing 452 n n N40 C41 XMC doub 453 n y C41 H41 XMC sing 454 n n C42 H421 XMC sing 455 n n C42 H422 XMC sing 456 n n # _atom_sites.entry_id 1IQN _atom_sites.fract_transf_matrix[1][1] 0.013856 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012776 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017662 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 301 301 CA CA . D 4 XMC A 1 401 401 XMC XMC . E 5 HOH A 1 501 501 HOH HOH . E 5 HOH A 2 502 502 HOH HOH . E 5 HOH A 3 503 503 HOH HOH . E 5 HOH A 4 505 505 HOH HOH . E 5 HOH A 5 506 506 HOH HOH . E 5 HOH A 6 507 507 HOH HOH . E 5 HOH A 7 508 508 HOH HOH . E 5 HOH A 8 509 509 HOH HOH . E 5 HOH A 9 510 510 HOH HOH . E 5 HOH A 10 511 511 HOH HOH . E 5 HOH A 11 513 513 HOH HOH . E 5 HOH A 12 514 514 HOH HOH . E 5 HOH A 13 515 515 HOH HOH . E 5 HOH A 14 516 516 HOH HOH . E 5 HOH A 15 517 517 HOH HOH . E 5 HOH A 16 519 519 HOH HOH . E 5 HOH A 17 520 520 HOH HOH . E 5 HOH A 18 522 522 HOH HOH . E 5 HOH A 19 523 523 HOH HOH . E 5 HOH A 20 524 524 HOH HOH . E 5 HOH A 21 525 525 HOH HOH . E 5 HOH A 22 526 526 HOH HOH . E 5 HOH A 23 527 527 HOH HOH . E 5 HOH A 24 528 528 HOH HOH . E 5 HOH A 25 530 530 HOH HOH . E 5 HOH A 26 532 532 HOH HOH . E 5 HOH A 27 533 533 HOH HOH . E 5 HOH A 28 536 536 HOH HOH . E 5 HOH A 29 537 537 HOH HOH . E 5 HOH A 30 538 538 HOH HOH . E 5 HOH A 31 539 539 HOH HOH . E 5 HOH A 32 540 540 HOH HOH . E 5 HOH A 33 541 541 HOH HOH . E 5 HOH A 34 542 542 HOH HOH . E 5 HOH A 35 544 544 HOH HOH . E 5 HOH A 36 546 546 HOH HOH . E 5 HOH A 37 547 547 HOH HOH . E 5 HOH A 38 549 549 HOH HOH . E 5 HOH A 39 550 550 HOH HOH . E 5 HOH A 40 551 551 HOH HOH . E 5 HOH A 41 552 552 HOH HOH . E 5 HOH A 42 553 553 HOH HOH . E 5 HOH A 43 554 554 HOH HOH . E 5 HOH A 44 555 555 HOH HOH . E 5 HOH A 45 556 556 HOH HOH . E 5 HOH A 46 558 558 HOH HOH . E 5 HOH A 47 559 559 HOH HOH . E 5 HOH A 48 561 561 HOH HOH . E 5 HOH A 49 562 562 HOH HOH . E 5 HOH A 50 563 563 HOH HOH . E 5 HOH A 51 564 564 HOH HOH . E 5 HOH A 52 565 565 HOH HOH . E 5 HOH A 53 569 569 HOH HOH . F 5 HOH L 1 504 504 HOH HOH . F 5 HOH L 2 512 512 HOH HOH . F 5 HOH L 3 518 518 HOH HOH . F 5 HOH L 4 521 521 HOH HOH . F 5 HOH L 5 529 529 HOH HOH . F 5 HOH L 6 531 531 HOH HOH . F 5 HOH L 7 534 534 HOH HOH . F 5 HOH L 8 535 535 HOH HOH . F 5 HOH L 9 543 543 HOH HOH . F 5 HOH L 10 545 545 HOH HOH . F 5 HOH L 11 548 548 HOH HOH . F 5 HOH L 12 557 557 HOH HOH . F 5 HOH L 13 560 560 HOH HOH . F 5 HOH L 14 566 566 HOH HOH . F 5 HOH L 15 567 567 HOH HOH . F 5 HOH L 16 568 568 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 XMC . . . D 4 8.18 25.564 8.213 1 22.51 ? C1 XMC 401 A 1 HETATM 2 C C2 XMC . . . D 4 8.825 24.343 7.77 1 24.58 ? C2 XMC 401 A 1 HETATM 3 C C3 XMC . . . D 4 8.411 24.792 10.665 1 21.21 ? C3 XMC 401 A 1 HETATM 4 C C4 XMC . . . D 4 9.063 23.563 10.184 1 21.47 ? C4 XMC 401 A 1 HETATM 5 C C5 XMC . . . D 4 9.258 23.355 8.787 1 22.81 ? C5 XMC 401 A 1 HETATM 6 C C6 XMC . . . D 4 7.952 25.835 9.63 1 21.91 ? C6 XMC 401 A 1 HETATM 7 CL CL7 XMC . . . D 4 7.381 26.551 14.008 1 26.74 ? CL7 XMC 401 A 1 HETATM 8 C C8 XMC . . . D 4 7.302 27.065 10.115 1 21.28 ? C8 XMC 401 A 1 HETATM 9 C C9 XMC . . . D 4 8.184 25.061 12.076 1 20.67 ? C9 XMC 401 A 1 HETATM 10 C C10 XMC . . . D 4 7.11 27.271 11.518 1 22.63 ? C10 XMC 401 A 1 HETATM 11 C C11 XMC . . . D 4 7.547 26.274 12.514 1 21.18 ? C11 XMC 401 A 1 HETATM 12 S S12 XMC . . . D 4 9.082 24.038 6.073 1 25.53 ? S12 XMC 401 A 1 HETATM 13 O O13 XMC . . . D 4 9.194 25.369 5.282 1 26.02 ? O13 XMC 401 A 1 HETATM 14 C C14 XMC . . . D 4 5.274 22.903 4.651 1 34.34 ? C14 XMC 401 A 1 HETATM 15 O O15 XMC . . . D 4 4.203 23.461 4.419 1 35.26 ? O15 XMC 401 A 1 HETATM 16 C C16 XMC . . . D 4 6.484 23.794 5.126 1 33.37 ? C16 XMC 401 A 1 HETATM 17 N N17 XMC . . . D 4 7.783 23.11 5.422 1 29.9 ? N17 XMC 401 A 1 HETATM 18 C C18 XMC . . . D 4 6.86 20.839 4.827 1 37.31 ? C18 XMC 401 A 1 HETATM 19 C C19 XMC . . . D 4 7.731 20.785 3.472 1 40.3 ? C19 XMC 401 A 1 HETATM 20 O O20 XMC . . . D 4 7.34 21.461 2.51 1 40.44 ? O20 XMC 401 A 1 HETATM 21 N N21 XMC . . . D 4 8.928 19.987 3.397 1 44.19 ? N21 XMC 401 A 1 HETATM 22 C C22 XMC . . . D 4 9.563 19.104 4.468 1 45.31 ? C22 XMC 401 A 1 HETATM 23 C C23 XMC . . . D 4 11.08 19.458 4.664 1 46.47 ? C23 XMC 401 A 1 HETATM 24 O O24 XMC . . . D 4 11.847 19.464 3.409 1 48.93 ? O24 XMC 401 A 1 HETATM 25 C C25 XMC . . . D 4 9.737 19.971 2.108 1 46.05 ? C25 XMC 401 A 1 HETATM 26 C C26 XMC . . . D 4 11.243 20.325 2.384 1 47.32 ? C26 XMC 401 A 1 HETATM 27 C C27 XMC . . . D 4 7.665 21.685 5.859 1 33.23 ? C27 XMC 401 A 1 HETATM 28 N N28 XMC . . . D 4 5.498 21.469 4.529 1 38.04 ? N28 XMC 401 A 1 HETATM 29 O O29 XMC . . . D 4 10.364 23.213 5.859 1 28.67 ? O29 XMC 401 A 1 HETATM 30 C C30 XMC . . . D 4 4.357 20.576 4.101 1 40.66 ? C30 XMC 401 A 1 HETATM 31 C C31 XMC . . . D 4 -0.039 17.704 10.634 1 46 ? C31 XMC 401 A 1 HETATM 32 N N32 XMC . . . D 4 2.172 18.318 7.448 1 46.72 ? N32 XMC 401 A 1 HETATM 33 C C33 XMC . . . D 4 1.207 17.697 8.435 1 45.08 ? C33 XMC 401 A 1 HETATM 34 C C34 XMC . . . D 4 0.885 18.341 9.734 1 44.39 ? C34 XMC 401 A 1 HETATM 35 C C35 XMC . . . D 4 2.491 17.622 6.095 1 45.97 ? C35 XMC 401 A 1 HETATM 36 C C36 XMC . . . D 4 0.526 16.408 8.166 1 45.23 ? C36 XMC 401 A 1 HETATM 37 C C37 XMC . . . D 4 2.867 19.667 7.761 1 44.9 ? C37 XMC 401 A 1 HETATM 38 C C38 XMC . . . D 4 3.433 19.92 5.193 1 43.53 ? C38 XMC 401 A 1 HETATM 39 C C39 XMC . . . D 4 3.398 18.359 5.046 1 43.18 ? C39 XMC 401 A 1 HETATM 40 N N40 XMC . . . D 4 -0.654 16.5 10.344 1 47.03 ? N40 XMC 401 A 1 HETATM 41 C C41 XMC . . . D 4 -0.38 15.868 9.143 1 47.56 ? C41 XMC 401 A 1 HETATM 42 C C42 XMC . . . D 4 3.792 20.313 6.681 1 42.41 ? C42 XMC 401 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 523 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 42 #