data_1IRX # _model_server_result.job_id 3UJTDe43tcXZEjtyeqQ_2w _model_server_result.datetime_utc '2024-11-02 09:32:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1irx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":601}' # _entry.id 1IRX # _exptl.entry_id 1IRX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.26 _cell.angle_gamma 90 _cell.entry_id 1IRX _cell.length_a 58.945 _cell.length_b 74.767 _cell.length_c 156.945 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IRX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 95 A ASP 95 1_555 C ZN ZN . A ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? metalc ? metalc2 A SG CYS 99 A CYS 99 1_555 C ZN ZN . A ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.414 ? metalc ? metalc3 A ND1 HIS 100 A HIS 100 1_555 C ZN ZN . A ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc4 A ND1 HIS 106 A HIS 106 1_555 C ZN ZN . A ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc5 A SG CYS 177 A CYS 177 1_555 D ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.744 ? metalc ? metalc6 A SG CYS 199 A CYS 199 1_555 D ZN ZN . A ZN 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc7 B OD1 ASP 95 B ASP 95 1_555 E ZN ZN . B ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.648 ? metalc ? metalc8 B SG CYS 99 B CYS 99 1_555 E ZN ZN . B ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? metalc ? metalc9 B N HIS 100 B HIS 100 1_555 E ZN ZN . B ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.583 ? metalc ? metalc10 B ND1 HIS 100 B HIS 100 1_555 E ZN ZN . B ZN 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1IRX _atom_sites.fract_transf_matrix[1][1] 0.016965 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000077 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013375 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006372 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 600 600 ZN ZN . D 2 ZN A 1 601 601 ZN ZN . E 2 ZN B 1 600 600 ZN ZN . F 2 ZN B 1 602 601 ZN ZN . G 3 HOH A 1 602 1 HOH TIP . G 3 HOH A 2 603 3 HOH TIP . G 3 HOH A 3 604 4 HOH TIP . G 3 HOH A 4 605 5 HOH TIP . G 3 HOH A 5 606 6 HOH TIP . G 3 HOH A 6 607 7 HOH TIP . G 3 HOH A 7 608 8 HOH TIP . G 3 HOH A 8 609 9 HOH TIP . G 3 HOH A 9 610 11 HOH TIP . G 3 HOH A 10 611 14 HOH TIP . G 3 HOH A 11 612 19 HOH TIP . G 3 HOH A 12 613 25 HOH TIP . G 3 HOH A 13 614 27 HOH TIP . G 3 HOH A 14 615 29 HOH TIP . G 3 HOH A 15 616 30 HOH TIP . G 3 HOH A 16 617 31 HOH TIP . G 3 HOH A 17 618 32 HOH TIP . G 3 HOH A 18 619 33 HOH TIP . G 3 HOH A 19 620 34 HOH TIP . G 3 HOH A 20 621 35 HOH TIP . G 3 HOH A 21 622 37 HOH TIP . G 3 HOH A 22 623 38 HOH TIP . G 3 HOH A 23 624 39 HOH TIP . G 3 HOH A 24 625 40 HOH TIP . G 3 HOH A 25 626 42 HOH TIP . G 3 HOH A 26 627 43 HOH TIP . G 3 HOH A 27 628 47 HOH TIP . G 3 HOH A 28 629 49 HOH TIP . G 3 HOH A 29 630 53 HOH TIP . G 3 HOH A 30 631 54 HOH TIP . G 3 HOH A 31 632 55 HOH TIP . G 3 HOH A 32 633 57 HOH TIP . G 3 HOH A 33 634 58 HOH TIP . G 3 HOH A 34 635 65 HOH TIP . G 3 HOH A 35 636 67 HOH TIP . G 3 HOH A 36 637 68 HOH TIP . G 3 HOH A 37 638 69 HOH TIP . G 3 HOH A 38 639 70 HOH TIP . G 3 HOH A 39 640 71 HOH TIP . G 3 HOH A 40 641 72 HOH TIP . G 3 HOH A 41 642 73 HOH TIP . G 3 HOH A 42 643 74 HOH TIP . G 3 HOH A 43 644 76 HOH TIP . G 3 HOH A 44 645 79 HOH TIP . G 3 HOH A 45 646 81 HOH TIP . G 3 HOH A 46 647 83 HOH TIP . G 3 HOH A 47 648 84 HOH TIP . G 3 HOH A 48 649 85 HOH TIP . G 3 HOH A 49 650 86 HOH TIP . G 3 HOH A 50 651 87 HOH TIP . G 3 HOH A 51 652 88 HOH TIP . G 3 HOH A 52 653 89 HOH TIP . G 3 HOH A 53 654 90 HOH TIP . G 3 HOH A 54 655 91 HOH TIP . G 3 HOH A 55 656 94 HOH TIP . G 3 HOH A 56 657 97 HOH TIP . G 3 HOH A 57 658 98 HOH TIP . G 3 HOH A 58 659 100 HOH TIP . G 3 HOH A 59 660 103 HOH TIP . G 3 HOH A 60 661 105 HOH TIP . G 3 HOH A 61 662 107 HOH TIP . G 3 HOH A 62 663 108 HOH TIP . G 3 HOH A 63 664 109 HOH TIP . G 3 HOH A 64 665 110 HOH TIP . G 3 HOH A 65 666 111 HOH TIP . G 3 HOH A 66 667 112 HOH TIP . G 3 HOH A 67 668 113 HOH TIP . G 3 HOH A 68 669 114 HOH TIP . G 3 HOH A 69 670 117 HOH TIP . G 3 HOH A 70 671 119 HOH TIP . G 3 HOH A 71 672 121 HOH TIP . G 3 HOH A 72 673 122 HOH TIP . G 3 HOH A 73 674 123 HOH TIP . G 3 HOH A 74 675 124 HOH TIP . G 3 HOH A 75 676 125 HOH TIP . G 3 HOH A 76 677 126 HOH TIP . G 3 HOH A 77 678 127 HOH TIP . G 3 HOH A 78 679 129 HOH TIP . G 3 HOH A 79 680 130 HOH TIP . G 3 HOH A 80 681 132 HOH TIP . G 3 HOH A 81 682 134 HOH TIP . G 3 HOH A 82 683 135 HOH TIP . G 3 HOH A 83 684 142 HOH TIP . G 3 HOH A 84 685 143 HOH TIP . G 3 HOH A 85 686 146 HOH TIP . G 3 HOH A 86 687 149 HOH TIP . G 3 HOH A 87 688 151 HOH TIP . G 3 HOH A 88 689 153 HOH TIP . G 3 HOH A 89 690 154 HOH TIP . G 3 HOH A 90 691 156 HOH TIP . G 3 HOH A 91 692 158 HOH TIP . G 3 HOH A 92 693 160 HOH TIP . G 3 HOH A 93 694 162 HOH TIP . G 3 HOH A 94 695 164 HOH TIP . G 3 HOH A 95 696 165 HOH TIP . G 3 HOH A 96 697 166 HOH TIP . G 3 HOH A 97 698 168 HOH TIP . G 3 HOH A 98 699 171 HOH TIP . G 3 HOH A 99 700 172 HOH TIP . G 3 HOH A 100 701 173 HOH TIP . G 3 HOH A 101 702 174 HOH TIP . G 3 HOH A 102 703 175 HOH TIP . G 3 HOH A 103 704 178 HOH TIP . G 3 HOH A 104 705 179 HOH TIP . G 3 HOH A 105 706 180 HOH TIP . G 3 HOH A 106 707 182 HOH TIP . G 3 HOH A 107 708 183 HOH TIP . G 3 HOH A 108 709 185 HOH TIP . G 3 HOH A 109 710 187 HOH TIP . G 3 HOH A 110 711 188 HOH TIP . G 3 HOH A 111 712 189 HOH TIP . G 3 HOH A 112 713 190 HOH TIP . G 3 HOH A 113 714 191 HOH TIP . G 3 HOH A 114 715 192 HOH TIP . G 3 HOH A 115 716 193 HOH TIP . G 3 HOH A 116 717 194 HOH TIP . G 3 HOH A 117 718 196 HOH TIP . G 3 HOH A 118 719 198 HOH TIP . G 3 HOH A 119 720 200 HOH TIP . G 3 HOH A 120 721 204 HOH TIP . G 3 HOH A 121 722 205 HOH TIP . G 3 HOH A 122 723 206 HOH TIP . G 3 HOH A 123 724 207 HOH TIP . G 3 HOH A 124 725 208 HOH TIP . G 3 HOH A 125 726 210 HOH TIP . G 3 HOH A 126 727 211 HOH TIP . G 3 HOH A 127 728 212 HOH TIP . G 3 HOH A 128 729 214 HOH TIP . G 3 HOH A 129 730 215 HOH TIP . G 3 HOH A 130 731 216 HOH TIP . G 3 HOH A 131 732 217 HOH TIP . G 3 HOH A 132 733 218 HOH TIP . G 3 HOH A 133 734 219 HOH TIP . G 3 HOH A 134 735 220 HOH TIP . G 3 HOH A 135 736 221 HOH TIP . G 3 HOH A 136 737 222 HOH TIP . G 3 HOH A 137 738 223 HOH TIP . G 3 HOH A 138 739 224 HOH TIP . G 3 HOH A 139 740 225 HOH TIP . G 3 HOH A 140 741 229 HOH TIP . G 3 HOH A 141 742 231 HOH TIP . G 3 HOH A 142 743 233 HOH TIP . G 3 HOH A 143 744 237 HOH TIP . G 3 HOH A 144 745 239 HOH TIP . G 3 HOH A 145 746 245 HOH TIP . G 3 HOH A 146 747 246 HOH TIP . H 3 HOH B 1 603 2 HOH TIP . H 3 HOH B 2 604 10 HOH TIP . H 3 HOH B 3 605 12 HOH TIP . H 3 HOH B 4 606 13 HOH TIP . H 3 HOH B 5 607 15 HOH TIP . H 3 HOH B 6 608 16 HOH TIP . H 3 HOH B 7 609 17 HOH TIP . H 3 HOH B 8 610 18 HOH TIP . H 3 HOH B 9 611 20 HOH TIP . H 3 HOH B 10 612 21 HOH TIP . H 3 HOH B 11 613 22 HOH TIP . H 3 HOH B 12 614 23 HOH TIP . H 3 HOH B 13 615 24 HOH TIP . H 3 HOH B 14 616 26 HOH TIP . H 3 HOH B 15 617 28 HOH TIP . H 3 HOH B 16 618 36 HOH TIP . H 3 HOH B 17 619 41 HOH TIP . H 3 HOH B 18 620 44 HOH TIP . H 3 HOH B 19 621 45 HOH TIP . H 3 HOH B 20 622 46 HOH TIP . H 3 HOH B 21 623 48 HOH TIP . H 3 HOH B 22 624 50 HOH TIP . H 3 HOH B 23 625 51 HOH TIP . H 3 HOH B 24 626 52 HOH TIP . H 3 HOH B 25 627 56 HOH TIP . H 3 HOH B 26 628 59 HOH TIP . H 3 HOH B 27 629 60 HOH TIP . H 3 HOH B 28 630 61 HOH TIP . H 3 HOH B 29 631 62 HOH TIP . H 3 HOH B 30 632 63 HOH TIP . H 3 HOH B 31 633 64 HOH TIP . H 3 HOH B 32 634 66 HOH TIP . H 3 HOH B 33 635 75 HOH TIP . H 3 HOH B 34 636 77 HOH TIP . H 3 HOH B 35 637 78 HOH TIP . H 3 HOH B 36 638 80 HOH TIP . H 3 HOH B 37 639 82 HOH TIP . H 3 HOH B 38 640 92 HOH TIP . H 3 HOH B 39 641 93 HOH TIP . H 3 HOH B 40 642 95 HOH TIP . H 3 HOH B 41 643 96 HOH TIP . H 3 HOH B 42 644 99 HOH TIP . H 3 HOH B 43 645 101 HOH TIP . H 3 HOH B 44 646 102 HOH TIP . H 3 HOH B 45 647 104 HOH TIP . H 3 HOH B 46 648 106 HOH TIP . H 3 HOH B 47 649 115 HOH TIP . H 3 HOH B 48 650 116 HOH TIP . H 3 HOH B 49 651 118 HOH TIP . H 3 HOH B 50 652 120 HOH TIP . H 3 HOH B 51 653 128 HOH TIP . H 3 HOH B 52 654 131 HOH TIP . H 3 HOH B 53 655 133 HOH TIP . H 3 HOH B 54 656 136 HOH TIP . H 3 HOH B 55 657 137 HOH TIP . H 3 HOH B 56 658 138 HOH TIP . H 3 HOH B 57 659 139 HOH TIP . H 3 HOH B 58 660 140 HOH TIP . H 3 HOH B 59 661 141 HOH TIP . H 3 HOH B 60 662 144 HOH TIP . H 3 HOH B 61 663 145 HOH TIP . H 3 HOH B 62 664 147 HOH TIP . H 3 HOH B 63 665 148 HOH TIP . H 3 HOH B 64 666 150 HOH TIP . H 3 HOH B 65 667 152 HOH TIP . H 3 HOH B 66 668 155 HOH TIP . H 3 HOH B 67 669 157 HOH TIP . H 3 HOH B 68 670 159 HOH TIP . H 3 HOH B 69 671 161 HOH TIP . H 3 HOH B 70 672 163 HOH TIP . H 3 HOH B 71 673 167 HOH TIP . H 3 HOH B 72 674 169 HOH TIP . H 3 HOH B 73 675 170 HOH TIP . H 3 HOH B 74 676 176 HOH TIP . H 3 HOH B 75 677 177 HOH TIP . H 3 HOH B 76 678 181 HOH TIP . H 3 HOH B 77 679 184 HOH TIP . H 3 HOH B 78 680 186 HOH TIP . H 3 HOH B 79 681 195 HOH TIP . H 3 HOH B 80 682 197 HOH TIP . H 3 HOH B 81 683 199 HOH TIP . H 3 HOH B 82 684 201 HOH TIP . H 3 HOH B 83 685 202 HOH TIP . H 3 HOH B 84 686 203 HOH TIP . H 3 HOH B 85 687 209 HOH TIP . H 3 HOH B 86 688 213 HOH TIP . H 3 HOH B 87 689 226 HOH TIP . H 3 HOH B 88 690 227 HOH TIP . H 3 HOH B 89 691 228 HOH TIP . H 3 HOH B 90 692 230 HOH TIP . H 3 HOH B 91 693 232 HOH TIP . H 3 HOH B 92 694 234 HOH TIP . H 3 HOH B 93 695 235 HOH TIP . H 3 HOH B 94 696 236 HOH TIP . H 3 HOH B 95 697 238 HOH TIP . H 3 HOH B 96 698 240 HOH TIP . H 3 HOH B 97 699 241 HOH TIP . H 3 HOH B 98 700 242 HOH TIP . H 3 HOH B 99 701 243 HOH TIP . H 3 HOH B 100 702 244 HOH TIP . H 3 HOH B 101 703 247 HOH TIP . H 3 HOH B 102 704 248 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 70.098 _atom_site.Cartn_y 44.047 _atom_site.Cartn_z 98.895 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 102.66 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 601 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #