data_1ITH
#
_model_server_result.job_id            IJU-gYP9HeYjJ3CYbsYiWw 
_model_server_result.datetime_utc      '2025-03-05 20:56:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ith 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":142}' 
#
_entry.id    1ITH 
#
_exptl.entry_id    1ITH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              26.017 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CYANIDE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1ITH 
_cell.length_a            104.8 
_cell.length_b            54.9 
_cell.length_c            110.6 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1ITH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 54.9 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 D FE HEM . A HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
metalc ? metalc2 C C CYN . A CYN 142 1_555 D FE HEM . A HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.818 ? 
metalc ? metalc3 C N CYN . A CYN 142 1_555 D FE HEM . A HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.755 ? 
metalc ? metalc4 B NE2 HIS 94 B HIS 94 1_555 F FE HEM . B HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
metalc ? metalc5 E C CYN . B CYN 142 1_555 F FE HEM . B HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.83 ? 
metalc ? metalc6 E N CYN . B CYN 142 1_555 F FE HEM . B HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.826 ? 
#
_chem_comp.formula           'C N -1' 
_chem_comp.formula_weight    26.017 
_chem_comp.id                CYN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CYANIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_chem_comp_bond.atom_id_1             C 
_chem_comp_bond.atom_id_2             N 
_chem_comp_bond.comp_id               CYN 
_chem_comp_bond.value_order           trip 
_chem_comp_bond.pdbx_ordinal          70 
_chem_comp_bond.pdbx_stereo_config    n 
_chem_comp_bond.pdbx_aromatic_flag    n 
#
_atom_sites.entry_id                     1ITH 
_atom_sites.fract_transf_matrix[1][1]    0.009542 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018215 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009042 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CYN A 1 142 1 CYN HEM . 
D 3 HEM A 1 143 1 HEM HEM . 
E 2 CYN B 1 142 1 CYN HEM . 
F 3 HEM B 1 143 1 HEM HEM . 
G 4 HOH A 1 385 385 HOH HOH . 
G 4 HOH A 2 386 386 HOH HOH . 
G 4 HOH A 3 395 395 HOH HOH . 
G 4 HOH A 4 396 396 HOH HOH . 
G 4 HOH A 5 397 397 HOH HOH . 
G 4 HOH A 6 399 399 HOH HOH . 
G 4 HOH A 7 401 401 HOH HOH . 
G 4 HOH A 8 405 405 HOH HOH . 
G 4 HOH A 9 407 407 HOH HOH . 
G 4 HOH A 10 409 409 HOH HOH . 
G 4 HOH A 11 410 410 HOH HOH . 
G 4 HOH A 12 413 413 HOH HOH . 
G 4 HOH A 13 415 415 HOH HOH . 
G 4 HOH A 14 419 419 HOH HOH . 
G 4 HOH A 15 422 422 HOH HOH . 
G 4 HOH A 16 423 423 HOH HOH . 
G 4 HOH A 17 426 426 HOH HOH . 
G 4 HOH A 18 428 428 HOH HOH . 
G 4 HOH A 19 430 430 HOH HOH . 
G 4 HOH A 20 432 432 HOH HOH . 
G 4 HOH A 21 436 436 HOH HOH . 
G 4 HOH A 22 437 437 HOH HOH . 
G 4 HOH A 23 438 438 HOH HOH . 
G 4 HOH A 24 440 440 HOH HOH . 
G 4 HOH A 25 442 442 HOH HOH . 
G 4 HOH A 26 443 443 HOH HOH . 
G 4 HOH A 27 444 444 HOH HOH . 
G 4 HOH A 28 446 446 HOH HOH . 
G 4 HOH A 29 450 450 HOH HOH . 
G 4 HOH A 30 452 452 HOH HOH . 
G 4 HOH A 31 454 454 HOH HOH . 
G 4 HOH A 32 455 455 HOH HOH . 
G 4 HOH A 33 459 459 HOH HOH . 
G 4 HOH A 34 461 461 HOH HOH . 
G 4 HOH A 35 462 462 HOH HOH . 
G 4 HOH A 36 463 463 HOH HOH . 
G 4 HOH A 37 466 466 HOH HOH . 
G 4 HOH A 38 467 467 HOH HOH . 
G 4 HOH A 39 469 469 HOH HOH . 
G 4 HOH A 40 472 472 HOH HOH . 
G 4 HOH A 41 474 474 HOH HOH . 
G 4 HOH A 42 475 475 HOH HOH . 
G 4 HOH A 43 476 476 HOH HOH . 
G 4 HOH A 44 477 477 HOH HOH . 
G 4 HOH A 45 481 481 HOH HOH . 
G 4 HOH A 46 483 483 HOH HOH . 
G 4 HOH A 47 485 485 HOH HOH . 
G 4 HOH A 48 487 487 HOH HOH . 
G 4 HOH A 49 489 489 HOH HOH . 
G 4 HOH A 50 491 491 HOH HOH . 
G 4 HOH A 51 492 492 HOH HOH . 
G 4 HOH A 52 493 493 HOH HOH . 
G 4 HOH A 53 494 494 HOH HOH . 
G 4 HOH A 54 495 495 HOH HOH . 
G 4 HOH A 55 497 497 HOH HOH . 
G 4 HOH A 56 499 499 HOH HOH . 
G 4 HOH A 57 500 500 HOH HOH . 
G 4 HOH A 58 503 503 HOH HOH . 
G 4 HOH A 59 508 508 HOH HOH . 
G 4 HOH A 60 509 509 HOH HOH . 
G 4 HOH A 61 510 510 HOH HOH . 
G 4 HOH A 62 512 512 HOH HOH . 
G 4 HOH A 63 600 600 HOH HOH . 
G 4 HOH A 64 606 606 HOH HOH . 
G 4 HOH A 65 610 610 HOH HOH . 
G 4 HOH A 66 611 611 HOH HOH . 
G 4 HOH A 67 612 612 HOH HOH . 
G 4 HOH A 68 613 613 HOH HOH . 
G 4 HOH A 69 614 614 HOH HOH . 
G 4 HOH A 70 617 617 HOH HOH . 
G 4 HOH A 71 618 618 HOH HOH . 
G 4 HOH A 72 619 619 HOH HOH . 
G 4 HOH A 73 621 621 HOH HOH . 
G 4 HOH A 74 622 622 HOH HOH . 
G 4 HOH A 75 624 624 HOH HOH . 
G 4 HOH A 76 628 628 HOH HOH . 
G 4 HOH A 77 631 631 HOH HOH . 
G 4 HOH A 78 632 632 HOH HOH . 
G 4 HOH A 79 633 633 HOH HOH . 
G 4 HOH A 80 635 635 HOH HOH . 
G 4 HOH A 81 637 637 HOH HOH . 
G 4 HOH A 82 638 638 HOH HOH . 
G 4 HOH A 83 700 700 HOH HOH . 
G 4 HOH A 84 701 701 HOH HOH . 
G 4 HOH A 85 707 707 HOH HOH . 
G 4 HOH A 86 708 708 HOH HOH . 
H 4 HOH B 1 384 384 HOH HOH . 
H 4 HOH B 2 388 388 HOH HOH . 
H 4 HOH B 3 391 391 HOH HOH . 
H 4 HOH B 4 393 393 HOH HOH . 
H 4 HOH B 5 394 394 HOH HOH . 
H 4 HOH B 6 398 398 HOH HOH . 
H 4 HOH B 7 400 400 HOH HOH . 
H 4 HOH B 8 403 403 HOH HOH . 
H 4 HOH B 9 408 408 HOH HOH . 
H 4 HOH B 10 411 411 HOH HOH . 
H 4 HOH B 11 412 412 HOH HOH . 
H 4 HOH B 12 417 417 HOH HOH . 
H 4 HOH B 13 420 420 HOH HOH . 
H 4 HOH B 14 421 421 HOH HOH . 
H 4 HOH B 15 424 424 HOH HOH . 
H 4 HOH B 16 425 425 HOH HOH . 
H 4 HOH B 17 427 427 HOH HOH . 
H 4 HOH B 18 429 429 HOH HOH . 
H 4 HOH B 19 431 431 HOH HOH . 
H 4 HOH B 20 435 435 HOH HOH . 
H 4 HOH B 21 441 441 HOH HOH . 
H 4 HOH B 22 445 445 HOH HOH . 
H 4 HOH B 23 447 447 HOH HOH . 
H 4 HOH B 24 448 448 HOH HOH . 
H 4 HOH B 25 449 449 HOH HOH . 
H 4 HOH B 26 456 456 HOH HOH . 
H 4 HOH B 27 458 458 HOH HOH . 
H 4 HOH B 28 460 460 HOH HOH . 
H 4 HOH B 29 465 465 HOH HOH . 
H 4 HOH B 30 468 468 HOH HOH . 
H 4 HOH B 31 470 470 HOH HOH . 
H 4 HOH B 32 471 471 HOH HOH . 
H 4 HOH B 33 478 478 HOH HOH . 
H 4 HOH B 34 479 479 HOH HOH . 
H 4 HOH B 35 488 488 HOH HOH . 
H 4 HOH B 36 490 490 HOH HOH . 
H 4 HOH B 37 498 498 HOH HOH . 
H 4 HOH B 38 504 504 HOH HOH . 
H 4 HOH B 39 505 505 HOH HOH . 
H 4 HOH B 40 603 603 HOH HOH . 
H 4 HOH B 41 604 604 HOH HOH . 
H 4 HOH B 42 605 605 HOH HOH . 
H 4 HOH B 43 608 608 HOH HOH . 
H 4 HOH B 44 615 615 HOH HOH . 
H 4 HOH B 45 616 616 HOH HOH . 
H 4 HOH B 46 620 620 HOH HOH . 
H 4 HOH B 47 623 623 HOH HOH . 
H 4 HOH B 48 625 625 HOH HOH . 
H 4 HOH B 49 626 626 HOH HOH . 
H 4 HOH B 50 627 627 HOH HOH . 
H 4 HOH B 51 629 629 HOH HOH . 
H 4 HOH B 52 630 630 HOH HOH . 
H 4 HOH B 53 634 634 HOH HOH . 
H 4 HOH B 54 639 639 HOH HOH . 
H 4 HOH B 55 640 640 HOH HOH . 
H 4 HOH B 56 641 641 HOH HOH . 
H 4 HOH B 57 702 702 HOH HOH . 
H 4 HOH B 58 703 703 HOH HOH . 
H 4 HOH B 59 704 704 HOH HOH . 
H 4 HOH B 60 706 706 HOH HOH . 
H 4 HOH B 61 710 710 HOH HOH . 
H 4 HOH B 62 711 711 HOH HOH . 
H 4 HOH B 63 712 712 HOH HOH . 
H 4 HOH B 64 713 713 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C CYN . . . C 2 12.732 46.346 6.771 1 18.9 ? C CYN 142 A 1 
HETATM 2 N N CYN . . . C 2 13.209 46.319 5.738 1 22.48 ? N CYN 142 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           5 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           2 
#