data_1IWQ # _model_server_result.job_id bsBLkRlfm31mkEslvW-U5w _model_server_result.datetime_utc '2024-11-21 23:55:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iwq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 1IWQ # _exptl.entry_id 1IWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1IWQ _cell.length_a 40.229 _cell.length_b 40.229 _cell.length_c 343.468 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H 1 1 A,B,C,D,E,F,G,H 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 11_555 -x+y,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 0 0 171.734 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 20 A ASP 20 1_555 C CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc2 A OD1 ASP 22 A ASP 22 1_555 C CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc3 A OD1 ASP 24 A ASP 24 1_555 C CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? metalc ? metalc4 A O THR 26 A THR 26 1_555 C CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc5 A OE1 GLU 31 A GLU 31 1_555 C CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc6 A OE2 GLU 31 A GLU 31 1_555 C CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc7 A OD1 ASP 56 A ASP 56 1_555 D CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc8 A OD1 ASP 58 A ASP 58 1_555 D CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc9 A OD1 ASN 60 A ASN 60 1_555 D CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc10 A O THR 62 A THR 62 1_555 D CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc11 A OE1 GLU 67 A GLU 67 1_555 D CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.39 ? metalc ? metalc12 A OE2 GLU 67 A GLU 67 1_555 D CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.585 ? metalc ? metalc13 A OD1 ASP 93 A ASP 93 1_555 E CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc14 A OD1 ASP 95 A ASP 95 1_555 E CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc15 A OD1 ASN 97 A ASN 97 1_555 E CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc16 A O TYR 99 A TYR 99 1_555 E CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc17 A OE1 GLU 104 A GLU 104 1_555 E CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc18 A OE2 GLU 104 A GLU 104 1_555 E CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc19 A OD1 ASP 129 A ASP 129 1_555 F CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc20 A OD2 ASP 131 A ASP 131 1_555 F CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc21 A OD2 ASP 133 A ASP 133 1_555 F CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.365 ? metalc ? metalc22 A O GLN 135 A GLN 135 1_555 F CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc23 A OE2 GLU 140 A GLU 140 1_555 F CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc24 A OE1 GLU 140 A GLU 140 1_555 F CA CA . A CA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.396 ? metalc ? metalc25 C CA CA . A CA 1001 1_555 G O HOH . A HOH 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc26 D CA CA . A CA 1002 1_555 G O HOH . A HOH 1077 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc27 E CA CA . A CA 1003 1_555 G O HOH . A HOH 1029 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc28 F CA CA . A CA 1004 1_555 G O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.405 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1IWQ _atom_sites.fract_transf_matrix[1][1] 0.024858 _atom_sites.fract_transf_matrix[1][2] 0.014352 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.028703 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002911 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 1001 1 CA CA . D 3 CA A 1 1002 2 CA CA . E 3 CA A 1 1003 3 CA CA . F 3 CA A 1 1004 4 CA CA . G 4 HOH A 1 1005 1 HOH HOH . G 4 HOH A 2 1006 2 HOH HOH . G 4 HOH A 3 1007 3 HOH HOH . G 4 HOH A 4 1008 4 HOH HOH . G 4 HOH A 5 1009 5 HOH HOH . G 4 HOH A 6 1010 6 HOH HOH . G 4 HOH A 7 1011 7 HOH HOH . G 4 HOH A 8 1012 8 HOH HOH . G 4 HOH A 9 1013 9 HOH HOH . G 4 HOH A 10 1014 10 HOH HOH . G 4 HOH A 11 1015 11 HOH HOH . G 4 HOH A 12 1016 12 HOH HOH . G 4 HOH A 13 1017 13 HOH HOH . G 4 HOH A 14 1018 14 HOH HOH . G 4 HOH A 15 1019 15 HOH HOH . G 4 HOH A 16 1020 16 HOH HOH . G 4 HOH A 17 1021 17 HOH HOH . G 4 HOH A 18 1022 18 HOH HOH . G 4 HOH A 19 1023 19 HOH HOH . G 4 HOH A 20 1024 20 HOH HOH . G 4 HOH A 21 1025 21 HOH HOH . G 4 HOH A 22 1026 22 HOH HOH . G 4 HOH A 23 1027 23 HOH HOH . G 4 HOH A 24 1028 24 HOH HOH . G 4 HOH A 25 1029 25 HOH HOH . G 4 HOH A 26 1030 26 HOH HOH . G 4 HOH A 27 1031 27 HOH HOH . G 4 HOH A 28 1032 28 HOH HOH . G 4 HOH A 29 1033 30 HOH HOH . G 4 HOH A 30 1034 31 HOH HOH . G 4 HOH A 31 1035 32 HOH HOH . G 4 HOH A 32 1036 33 HOH HOH . G 4 HOH A 33 1037 34 HOH HOH . G 4 HOH A 34 1038 35 HOH HOH . G 4 HOH A 35 1039 36 HOH HOH . G 4 HOH A 36 1040 37 HOH HOH . G 4 HOH A 37 1041 38 HOH HOH . G 4 HOH A 38 1042 39 HOH HOH . G 4 HOH A 39 1043 40 HOH HOH . G 4 HOH A 40 1044 41 HOH HOH . G 4 HOH A 41 1045 42 HOH HOH . G 4 HOH A 42 1046 44 HOH HOH . G 4 HOH A 43 1047 45 HOH HOH . G 4 HOH A 44 1048 46 HOH HOH . G 4 HOH A 45 1049 47 HOH HOH . G 4 HOH A 46 1050 48 HOH HOH . G 4 HOH A 47 1051 49 HOH HOH . G 4 HOH A 48 1052 50 HOH HOH . G 4 HOH A 49 1053 51 HOH HOH . G 4 HOH A 50 1054 52 HOH HOH . G 4 HOH A 51 1055 53 HOH HOH . G 4 HOH A 52 1056 54 HOH HOH . G 4 HOH A 53 1057 55 HOH HOH . G 4 HOH A 54 1058 56 HOH HOH . G 4 HOH A 55 1059 57 HOH HOH . G 4 HOH A 56 1060 58 HOH HOH . G 4 HOH A 57 1061 59 HOH HOH . G 4 HOH A 58 1062 60 HOH HOH . G 4 HOH A 59 1063 61 HOH HOH . G 4 HOH A 60 1064 62 HOH HOH . G 4 HOH A 61 1065 63 HOH HOH . G 4 HOH A 62 1066 64 HOH HOH . G 4 HOH A 63 1067 65 HOH HOH . G 4 HOH A 64 1068 66 HOH HOH . G 4 HOH A 65 1069 68 HOH HOH . G 4 HOH A 66 1070 69 HOH HOH . G 4 HOH A 67 1071 70 HOH HOH . G 4 HOH A 68 1072 71 HOH HOH . G 4 HOH A 69 1073 72 HOH HOH . G 4 HOH A 70 1074 73 HOH HOH . G 4 HOH A 71 1075 74 HOH HOH . G 4 HOH A 72 1076 75 HOH HOH . G 4 HOH A 73 1077 76 HOH HOH . G 4 HOH A 74 1078 77 HOH HOH . G 4 HOH A 75 1079 78 HOH HOH . G 4 HOH A 76 1080 79 HOH HOH . G 4 HOH A 77 1081 80 HOH HOH . G 4 HOH A 78 1082 81 HOH HOH . G 4 HOH A 79 1083 82 HOH HOH . G 4 HOH A 80 1084 83 HOH HOH . G 4 HOH A 81 1085 84 HOH HOH . G 4 HOH A 82 1086 86 HOH HOH . H 4 HOH B 1 29 29 HOH HOH . H 4 HOH B 2 43 43 HOH HOH . H 4 HOH B 3 67 67 HOH HOH . H 4 HOH B 4 85 85 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x -9.645 _atom_site.Cartn_y 22.186 _atom_site.Cartn_z 89.373 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.8 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #