data_1IYL
#
_model_server_result.job_id            0e-WnqBs3DEZl2q1W5_syQ 
_model_server_result.datetime_utc      '2024-11-22 21:31:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1iyl 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":452}' 
#
_entry.id    1IYL 
#
_exptl.entry_id    1IYL 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              404.462 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1IYL 
_cell.length_a            93.277 
_cell.length_b            96.885 
_cell.length_c            269.277 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1IYL 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
PISA,PQS dimeric 2 software_defined_assembly 5 
PISA,PQS dimeric 2 software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E 1 1 
B,F 2 1 
C,G 3 1 
D 4 1 
A,B,E,F 5 1 
C,D,G 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
#
_chem_comp.formula           'C23 H24 N4 O3' 
_chem_comp.formula_weight    404.462 
_chem_comp.id                R64 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 C2 R64 sing 275 n y 
O1 C9 R64 sing 276 n y 
C2 C3 R64 doub 277 n y 
C2 C10 R64 sing 278 n n 
C3 C4 R64 sing 279 n y 
C3 C11 R64 sing 280 n n 
C4 C5 R64 sing 281 n y 
C4 C9 R64 doub 282 n y 
C5 C6 R64 doub 283 n y 
C5 O12 R64 sing 284 n n 
C6 C7 R64 sing 285 n y 
C6 HC6 R64 sing 286 n n 
C7 C8 R64 doub 287 n y 
C7 HC7 R64 sing 288 n n 
C8 C9 R64 sing 289 n y 
C8 HC8 R64 sing 290 n n 
C10 O30 R64 doub 291 n n 
C10 C31 R64 sing 292 n n 
C31 N32 R64 sing 293 n y 
C31 N35 R64 doub 294 n y 
N32 C30 R64 sing 295 n n 
N32 C33 R64 sing 296 n y 
C30 H301 R64 sing 297 n n 
C30 H302 R64 sing 298 n n 
C30 H303 R64 sing 299 n n 
C33 C34 R64 doub 300 n y 
C33 HC33 R64 sing 301 n n 
C34 N35 R64 sing 302 n y 
C34 HC34 R64 sing 303 n n 
C11 H111 R64 sing 304 n n 
C11 H112 R64 sing 305 n n 
C11 H113 R64 sing 306 n n 
O12 C13 R64 sing 307 n n 
C13 C14 R64 sing 308 n n 
C13 H131 R64 sing 309 n n 
C13 H132 R64 sing 310 n n 
C14 C15 R64 sing 311 n n 
C14 H141 R64 sing 312 n n 
C14 H142 R64 sing 313 n n 
C15 N16 R64 sing 314 n n 
C15 H151 R64 sing 315 n n 
C15 H152 R64 sing 316 n n 
N16 C17 R64 sing 317 n n 
N16 HN16 R64 sing 318 n n 
C17 C18 R64 sing 319 n n 
C17 H171 R64 sing 320 n n 
C17 H172 R64 sing 321 n n 
C18 C19 R64 sing 322 n y 
C18 C23 R64 doub 323 n y 
C19 C20 R64 doub 324 n y 
C19 HC19 R64 sing 325 n n 
C20 C21 R64 sing 326 n y 
C20 HC20 R64 sing 327 n n 
C21 N22 R64 doub 328 n y 
C21 HC21 R64 sing 329 n n 
N22 C23 R64 sing 330 n y 
C23 HC23 R64 sing 331 n n 
#
_atom_sites.entry_id                     1IYL 
_atom_sites.fract_transf_matrix[1][1]    0.010721 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010322 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003714 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 R64 A 1 452 101 R64 R64 . 
F 2 R64 B 1 452 102 R64 R64 . 
G 2 R64 C 1 452 103 R64 R64 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 R64 . . . E 2 11.968 49.155 -4.241 1 35.68 ? O1 R64 452 A 1 
HETATM 2 C C2 R64 . . . E 2 11.936 49.381 -2.888 1 36.41 ? C2 R64 452 A 1 
HETATM 3 C C3 R64 . . . E 2 13.103 48.967 -2.316 1 35.49 ? C3 R64 452 A 1 
HETATM 4 C C4 R64 . . . E 2 13.903 48.431 -3.334 1 34.65 ? C4 R64 452 A 1 
HETATM 5 C C5 R64 . . . E 2 15.169 47.78 -3.31 1 35.64 ? C5 R64 452 A 1 
HETATM 6 C C6 R64 . . . E 2 15.733 47.458 -4.519 1 34.75 ? C6 R64 452 A 1 
HETATM 7 C C7 R64 . . . E 2 15.045 47.735 -5.73 1 35.18 ? C7 R64 452 A 1 
HETATM 8 C C8 R64 . . . E 2 13.802 48.329 -5.73 1 35.13 ? C8 R64 452 A 1 
HETATM 9 C C9 R64 . . . E 2 13.218 48.633 -4.5 1 35.25 ? C9 R64 452 A 1 
HETATM 10 C C10 R64 . . . E 2 10.757 49.955 -2.3 1 37.08 ? C10 R64 452 A 1 
HETATM 11 O O30 R64 . . . E 2 10.782 50.551 -1.229 1 35.96 ? O30 R64 452 A 1 
HETATM 12 C C31 R64 . . . E 2 9.526 49.797 -2.998 1 38.7 ? C31 R64 452 A 1 
HETATM 13 N N32 R64 . . . E 2 8.418 50.575 -2.699 1 39.3 ? N32 R64 452 A 1 
HETATM 14 C C30 R64 . . . E 2 8.265 51.699 -1.745 1 39.87 ? C30 R64 452 A 1 
HETATM 15 C C33 R64 . . . E 2 7.415 50.1 -3.531 1 40.16 ? C33 R64 452 A 1 
HETATM 16 C C34 R64 . . . E 2 7.96 49.095 -4.267 1 39.83 ? C34 R64 452 A 1 
HETATM 17 N N35 R64 . . . E 2 9.241 48.921 -3.937 1 39.25 ? N35 R64 452 A 1 
HETATM 18 C C11 R64 . . . E 2 13.557 48.999 -0.887 1 34.66 ? C11 R64 452 A 1 
HETATM 19 O O12 R64 . . . E 2 15.805 47.487 -2.109 1 37.61 ? O12 R64 452 A 1 
HETATM 20 C C13 R64 . . . E 2 16.916 46.588 -2.02 1 38.56 ? C13 R64 452 A 1 
HETATM 21 C C14 R64 . . . E 2 17.379 46.499 -0.592 1 38.77 ? C14 R64 452 A 1 
HETATM 22 C C15 R64 . . . E 2 16.283 45.86 0.162 1 42.25 ? C15 R64 452 A 1 
HETATM 23 N N16 R64 . . . E 2 16.488 45.884 1.628 1 45.49 ? N16 R64 452 A 1 
HETATM 24 C C17 R64 . . . E 2 15.337 45.158 2.191 1 46.69 ? C17 R64 452 A 1 
HETATM 25 C C18 R64 . . . E 2 15.551 44.973 3.604 1 48.49 ? C18 R64 452 A 1 
HETATM 26 C C19 R64 . . . E 2 15.874 43.755 4.134 1 48.07 ? C19 R64 452 A 1 
HETATM 27 C C20 R64 . . . E 2 16.065 43.668 5.5 1 49.42 ? C20 R64 452 A 1 
HETATM 28 C C21 R64 . . . E 2 15.917 44.81 6.275 1 49.82 ? C21 R64 452 A 1 
HETATM 29 N N22 R64 . . . E 2 15.604 45.974 5.732 1 49.94 ? N22 R64 452 A 1 
HETATM 30 C C23 R64 . . . E 2 15.422 46.057 4.415 1 48.02 ? C23 R64 452 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    32 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           30 
#