data_1IYL # _model_server_result.job_id ylCe8yq3EC8ICPaxvG14CA _model_server_result.datetime_utc '2024-11-22 21:15:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1iyl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":452}' # _entry.id 1IYL # _exptl.entry_id 1IYL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.462 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1IYL _cell.length_a 93.277 _cell.length_b 96.885 _cell.length_c 269.277 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1IYL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 PISA,PQS dimeric 2 software_defined_assembly 5 PISA,PQS dimeric 2 software_defined_assembly 6 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E 1 1 B,F 2 1 C,G 3 1 D 4 1 A,B,E,F 5 1 C,D,G 6 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C23 H24 N4 O3' _chem_comp.formula_weight 404.462 _chem_comp.id R64 _chem_comp.mon_nstd_flag . _chem_comp.name (1-METHYL-1H-IMIDAZOL-2-YL)-(3-METHYL-4-{3-[(PYRIDIN-3-YLMETHYL)-AMINO]-PROPOXY}-BENZOFURAN-2-YL)-METHANONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 R64 sing 275 n y O1 C9 R64 sing 276 n y C2 C3 R64 doub 277 n y C2 C10 R64 sing 278 n n C3 C4 R64 sing 279 n y C3 C11 R64 sing 280 n n C4 C5 R64 sing 281 n y C4 C9 R64 doub 282 n y C5 C6 R64 doub 283 n y C5 O12 R64 sing 284 n n C6 C7 R64 sing 285 n y C6 HC6 R64 sing 286 n n C7 C8 R64 doub 287 n y C7 HC7 R64 sing 288 n n C8 C9 R64 sing 289 n y C8 HC8 R64 sing 290 n n C10 O30 R64 doub 291 n n C10 C31 R64 sing 292 n n C31 N32 R64 sing 293 n y C31 N35 R64 doub 294 n y N32 C30 R64 sing 295 n n N32 C33 R64 sing 296 n y C30 H301 R64 sing 297 n n C30 H302 R64 sing 298 n n C30 H303 R64 sing 299 n n C33 C34 R64 doub 300 n y C33 HC33 R64 sing 301 n n C34 N35 R64 sing 302 n y C34 HC34 R64 sing 303 n n C11 H111 R64 sing 304 n n C11 H112 R64 sing 305 n n C11 H113 R64 sing 306 n n O12 C13 R64 sing 307 n n C13 C14 R64 sing 308 n n C13 H131 R64 sing 309 n n C13 H132 R64 sing 310 n n C14 C15 R64 sing 311 n n C14 H141 R64 sing 312 n n C14 H142 R64 sing 313 n n C15 N16 R64 sing 314 n n C15 H151 R64 sing 315 n n C15 H152 R64 sing 316 n n N16 C17 R64 sing 317 n n N16 HN16 R64 sing 318 n n C17 C18 R64 sing 319 n n C17 H171 R64 sing 320 n n C17 H172 R64 sing 321 n n C18 C19 R64 sing 322 n y C18 C23 R64 doub 323 n y C19 C20 R64 doub 324 n y C19 HC19 R64 sing 325 n n C20 C21 R64 sing 326 n y C20 HC20 R64 sing 327 n n C21 N22 R64 doub 328 n y C21 HC21 R64 sing 329 n n N22 C23 R64 sing 330 n y C23 HC23 R64 sing 331 n n # _atom_sites.entry_id 1IYL _atom_sites.fract_transf_matrix[1][1] 0.010721 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010322 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003714 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 R64 A 1 452 101 R64 R64 . F 2 R64 B 1 452 102 R64 R64 . G 2 R64 C 1 452 103 R64 R64 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 R64 . . . F 2 29.89 74.289 60.925 1 55.08 ? O1 R64 452 B 1 HETATM 2 C C2 R64 . . . F 2 29.242 74.07 59.702 1 56 ? C2 R64 452 B 1 HETATM 3 C C3 R64 . . . F 2 30.147 73.68 58.761 1 55.28 ? C3 R64 452 B 1 HETATM 4 C C4 R64 . . . F 2 31.381 73.544 59.414 1 54.76 ? C4 R64 452 B 1 HETATM 5 C C5 R64 . . . F 2 32.714 73.203 59.041 1 54.18 ? C5 R64 452 B 1 HETATM 6 C C6 R64 . . . F 2 33.759 73.168 59.987 1 54.45 ? C6 R64 452 B 1 HETATM 7 C C7 R64 . . . F 2 33.438 73.524 61.336 1 54.11 ? C7 R64 452 B 1 HETATM 8 C C8 R64 . . . F 2 32.132 73.889 61.67 1 54.23 ? C8 R64 452 B 1 HETATM 9 C C9 R64 . . . F 2 31.149 73.907 60.707 1 54.78 ? C9 R64 452 B 1 HETATM 10 C C10 R64 . . . F 2 27.816 74.294 59.558 1 56.7 ? C10 R64 452 B 1 HETATM 11 O O30 R64 . . . F 2 27.094 73.707 58.78 1 56.4 ? O30 R64 452 B 1 HETATM 12 C C31 R64 . . . F 2 27.351 75.304 60.455 1 57.86 ? C31 R64 452 B 1 HETATM 13 N N32 R64 . . . F 2 26.084 75.345 60.983 1 57.41 ? N32 R64 452 B 1 HETATM 14 C C30 R64 . . . F 2 24.943 74.418 60.802 1 58.26 ? C30 R64 452 B 1 HETATM 15 C C33 R64 . . . F 2 26.078 76.482 61.754 1 57.94 ? C33 R64 452 B 1 HETATM 16 C C34 R64 . . . F 2 27.33 77.08 61.665 1 58.58 ? C34 R64 452 B 1 HETATM 17 N N35 R64 . . . F 2 28.12 76.34 60.854 1 57.75 ? N35 R64 452 B 1 HETATM 18 C C11 R64 . . . F 2 29.859 73.498 57.329 1 56.64 ? C11 R64 452 B 1 HETATM 19 O O12 R64 . . . F 2 33.014 72.944 57.736 1 54.33 ? O12 R64 452 B 1 HETATM 20 C C13 R64 . . . F 2 34.4 73.164 57.431 1 53.14 ? C13 R64 452 B 1 HETATM 21 C C14 R64 . . . F 2 34.652 73.345 55.931 1 54.55 ? C14 R64 452 B 1 HETATM 22 C C15 R64 . . . F 2 33.84 74.495 55.363 1 55.7 ? C15 R64 452 B 1 HETATM 23 N N16 R64 . . . F 2 33.984 74.517 53.927 1 55.89 ? N16 R64 452 B 1 HETATM 24 C C17 R64 . . . F 2 32.923 75.278 53.306 1 57.62 ? C17 R64 452 B 1 HETATM 25 C C18 R64 . . . F 2 33.061 75.293 51.855 1 58.6 ? C18 R64 452 B 1 HETATM 26 C C19 R64 . . . F 2 34.109 74.623 51.254 1 58.9 ? C19 R64 452 B 1 HETATM 27 C C20 R64 . . . F 2 34.269 74.625 49.882 1 58.97 ? C20 R64 452 B 1 HETATM 28 C C21 R64 . . . F 2 33.359 75.326 49.116 1 58.25 ? C21 R64 452 B 1 HETATM 29 N N22 R64 . . . F 2 32.322 75.989 49.651 1 58.29 ? N22 R64 452 B 1 HETATM 30 C C23 R64 . . . F 2 32.167 75.997 51.007 1 58.64 ? C23 R64 452 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 262 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #