data_1IZE
#
_model_server_result.job_id            gKyd8dQaDWHb78ktyhq8ow 
_model_server_result.datetime_utc      '2025-04-14 15:52:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1ize 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1001}' 
#
_entry.id    1IZE 
#
_exptl.entry_id    1IZE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              180.156 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            alpha-D-mannopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          120.31 
_cell.angle_gamma         90 
_cell.entry_id            1IZE 
_cell.length_a            106.767 
_cell.length_b            38.627 
_cell.length_c            78.732 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1IZE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A OG1 THR 3 A THR 3 1_555 C C1 MAN . A MAN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.39 ? 
covale ? covale2 B C IVA 1 B IVA 2001 1_555 B N VAL 2 B VAL 2002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 B C VAL 3 B VAL 2003 1_555 B N STA 4 B STA 2004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale4 B C STA 4 B STA 2004 1_555 B N ALA 5 B ALA 2005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
covale ? covale5 B C ALA 5 B ALA 2005 1_555 B N STA 6 B STA 2006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C6 H12 O6' 
_chem_comp.formula_weight    180.156 
_chem_comp.id                MAN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              alpha-D-mannopyranose 
_chem_comp.type              'd-saccharide, alpha linking' 
_chem_comp.pdbx_synonyms     alpha-D-mannose;D-mannose;mannose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MAN sing 221 n n 
C1 O1 MAN sing 222 n n 
C1 O5 MAN sing 223 n n 
C1 H1 MAN sing 224 n n 
C2 C3 MAN sing 225 n n 
C2 O2 MAN sing 226 n n 
C2 H2 MAN sing 227 n n 
C3 C4 MAN sing 228 n n 
C3 O3 MAN sing 229 n n 
C3 H3 MAN sing 230 n n 
C4 C5 MAN sing 231 n n 
C4 O4 MAN sing 232 n n 
C4 H4 MAN sing 233 n n 
C5 C6 MAN sing 234 n n 
C5 O5 MAN sing 235 n n 
C5 H5 MAN sing 236 n n 
C6 O6 MAN sing 237 n n 
C6 H61 MAN sing 238 n n 
C6 H62 MAN sing 239 n n 
O1 HO1 MAN sing 240 n n 
O2 HO2 MAN sing 241 n n 
O3 HO3 MAN sing 242 n n 
O4 HO4 MAN sing 243 n n 
O6 HO6 MAN sing 244 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
MAN DManpa 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
MAN a-D-mannopyranose 'COMMON NAME' GMML 1 
MAN a-D-Manp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
MAN Man 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     1IZE 
_atom_sites.fract_transf_matrix[1][1]    0.009366 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005475 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.025889 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014712 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MAN A 1 1001 1001 MAN MAN . 
D 4 HOH A 1 2003 2003 HOH HOH . 
D 4 HOH A 2 2004 2004 HOH HOH . 
D 4 HOH A 3 2005 2005 HOH HOH . 
D 4 HOH A 4 2006 2006 HOH HOH . 
D 4 HOH A 5 2007 2007 HOH HOH . 
D 4 HOH A 6 2008 2008 HOH HOH . 
D 4 HOH A 7 2009 2009 HOH HOH . 
D 4 HOH A 8 2010 2010 HOH HOH . 
D 4 HOH A 9 2011 2011 HOH HOH . 
D 4 HOH A 10 2012 2012 HOH HOH . 
D 4 HOH A 11 2013 2013 HOH HOH . 
D 4 HOH A 12 2014 2014 HOH HOH . 
D 4 HOH A 13 2015 2015 HOH HOH . 
D 4 HOH A 14 2016 2016 HOH HOH . 
D 4 HOH A 15 2017 2017 HOH HOH . 
D 4 HOH A 16 2018 2018 HOH HOH . 
D 4 HOH A 17 2019 2019 HOH HOH . 
D 4 HOH A 18 2020 2020 HOH HOH . 
D 4 HOH A 19 2021 2021 HOH HOH . 
D 4 HOH A 20 2022 2022 HOH HOH . 
D 4 HOH A 21 2023 2023 HOH HOH . 
D 4 HOH A 22 2024 2024 HOH HOH . 
D 4 HOH A 23 2025 2025 HOH HOH . 
D 4 HOH A 24 2026 2026 HOH HOH . 
D 4 HOH A 25 2027 2027 HOH HOH . 
D 4 HOH A 26 2028 2028 HOH HOH . 
D 4 HOH A 27 2029 2029 HOH HOH . 
D 4 HOH A 28 2030 2030 HOH HOH . 
D 4 HOH A 29 2031 2031 HOH HOH . 
D 4 HOH A 30 2032 2032 HOH HOH . 
D 4 HOH A 31 2033 2033 HOH HOH . 
D 4 HOH A 32 2034 2034 HOH HOH . 
D 4 HOH A 33 2035 2035 HOH HOH . 
D 4 HOH A 34 2036 2036 HOH HOH . 
D 4 HOH A 35 2037 2037 HOH HOH . 
D 4 HOH A 36 2038 2038 HOH HOH . 
D 4 HOH A 37 2039 2039 HOH HOH . 
D 4 HOH A 38 2040 2040 HOH HOH . 
D 4 HOH A 39 2041 2041 HOH HOH . 
D 4 HOH A 40 2042 2042 HOH HOH . 
D 4 HOH A 41 2043 2043 HOH HOH . 
D 4 HOH A 42 2044 2044 HOH HOH . 
D 4 HOH A 43 2045 2045 HOH HOH . 
D 4 HOH A 44 2046 2046 HOH HOH . 
D 4 HOH A 45 2047 2047 HOH HOH . 
D 4 HOH A 46 2048 2048 HOH HOH . 
D 4 HOH A 47 2049 2049 HOH HOH . 
D 4 HOH A 48 2050 2050 HOH HOH . 
D 4 HOH A 49 2051 2051 HOH HOH . 
D 4 HOH A 50 2052 2052 HOH HOH . 
D 4 HOH A 51 2053 2053 HOH HOH . 
D 4 HOH A 52 2054 2054 HOH HOH . 
D 4 HOH A 53 2055 2055 HOH HOH . 
D 4 HOH A 54 2056 2056 HOH HOH . 
D 4 HOH A 55 2057 2057 HOH HOH . 
D 4 HOH A 56 2058 2058 HOH HOH . 
D 4 HOH A 57 2059 2059 HOH HOH . 
D 4 HOH A 58 2060 2060 HOH HOH . 
D 4 HOH A 59 2061 2061 HOH HOH . 
D 4 HOH A 60 2063 2063 HOH HOH . 
D 4 HOH A 61 2064 2064 HOH HOH . 
D 4 HOH A 62 2065 2065 HOH HOH . 
D 4 HOH A 63 2066 2066 HOH HOH . 
D 4 HOH A 64 2067 2067 HOH HOH . 
D 4 HOH A 65 2069 2069 HOH HOH . 
D 4 HOH A 66 2070 2070 HOH HOH . 
D 4 HOH A 67 2071 2071 HOH HOH . 
D 4 HOH A 68 2072 2072 HOH HOH . 
D 4 HOH A 69 2073 2073 HOH HOH . 
D 4 HOH A 70 2074 2074 HOH HOH . 
D 4 HOH A 71 2075 2075 HOH HOH . 
D 4 HOH A 72 2076 2076 HOH HOH . 
D 4 HOH A 73 2077 2077 HOH HOH . 
D 4 HOH A 74 2078 2078 HOH HOH . 
D 4 HOH A 75 2079 2079 HOH HOH . 
D 4 HOH A 76 2080 2080 HOH HOH . 
D 4 HOH A 77 2081 2081 HOH HOH . 
D 4 HOH A 78 2082 2082 HOH HOH . 
D 4 HOH A 79 2083 2083 HOH HOH . 
D 4 HOH A 80 2084 2084 HOH HOH . 
D 4 HOH A 81 2085 2085 HOH HOH . 
D 4 HOH A 82 2086 2086 HOH HOH . 
D 4 HOH A 83 2087 2087 HOH HOH . 
D 4 HOH A 84 2088 2088 HOH HOH . 
D 4 HOH A 85 2089 2089 HOH HOH . 
D 4 HOH A 86 2090 2090 HOH HOH . 
D 4 HOH A 87 2091 2091 HOH HOH . 
D 4 HOH A 88 2092 2092 HOH HOH . 
D 4 HOH A 89 2093 2093 HOH HOH . 
D 4 HOH A 90 2094 2094 HOH HOH . 
D 4 HOH A 91 2095 2095 HOH HOH . 
D 4 HOH A 92 2096 2096 HOH HOH . 
D 4 HOH A 93 2097 2097 HOH HOH . 
D 4 HOH A 94 2098 2098 HOH HOH . 
D 4 HOH A 95 2099 2099 HOH HOH . 
D 4 HOH A 96 2100 2100 HOH HOH . 
D 4 HOH A 97 2101 2101 HOH HOH . 
D 4 HOH A 98 2102 2102 HOH HOH . 
D 4 HOH A 99 2103 2103 HOH HOH . 
D 4 HOH A 100 2104 2104 HOH HOH . 
D 4 HOH A 101 2105 2105 HOH HOH . 
D 4 HOH A 102 2106 2106 HOH HOH . 
D 4 HOH A 103 2107 2107 HOH HOH . 
D 4 HOH A 104 2108 2108 HOH HOH . 
E 4 HOH B 1 2007 2002 HOH HOH . 
E 4 HOH B 2 2062 2062 HOH HOH . 
E 4 HOH B 3 2068 2068 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MAN . . . C 3 38.256 46.133 26.184 1 30.66 ? C1 MAN 1001 A 1 
HETATM 2 C C2 MAN . . . C 3 38.592 47.597 25.876 1 32.45 ? C2 MAN 1001 A 1 
HETATM 3 C C3 MAN . . . C 3 37.739 48.525 26.741 1 33.67 ? C3 MAN 1001 A 1 
HETATM 4 C C4 MAN . . . C 3 36.255 48.185 26.581 1 34.74 ? C4 MAN 1001 A 1 
HETATM 5 C C5 MAN . . . C 3 36.02 46.69 26.832 1 34.21 ? C5 MAN 1001 A 1 
HETATM 6 C C6 MAN . . . C 3 34.586 46.276 26.57 1 35.17 ? C6 MAN 1001 A 1 
HETATM 7 O O2 MAN . . . C 3 38.34 47.867 24.504 1 33.47 ? O2 MAN 1001 A 1 
HETATM 8 O O3 MAN . . . C 3 37.962 49.872 26.35 1 35.02 ? O3 MAN 1001 A 1 
HETATM 9 O O4 MAN . . . C 3 35.489 48.949 27.501 1 36.89 ? O4 MAN 1001 A 1 
HETATM 10 O O5 MAN . . . C 3 36.858 45.901 25.958 1 32.2 ? O5 MAN 1001 A 1 
HETATM 11 O O6 MAN . . . C 3 34.286 46.318 25.182 1 37.08 ? O6 MAN 1001 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           11 
#