data_1IZI
#
_model_server_result.job_id            52YVZMUj9JzUh5bHiPqHgQ 
_model_server_result.datetime_utc      '2025-02-16 12:19:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1izi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":1001}' 
#
_entry.id    1IZI 
#
_exptl.entry_id    1IZI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              685.809 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '{(1S)-1-BENZYL-4-[3-CARBAMOYL-1-(1-CARBAMOYL-2-PHENYL-ETHYLCARBAMOYL)-(S)-PROPYLCARBAMOYL]-2-OXO-5-PHENYL-PENTYL}-CARBAMIC ACID TERT-BUTYL ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1IZI 
_cell.length_a            61.788 
_cell.length_b            61.788 
_cell.length_c            82.821 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1IZI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C38 H47 N5 O7' 
_chem_comp.formula_weight    685.809 
_chem_comp.id                Q50 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '{(1S)-1-BENZYL-4-[3-CARBAMOYL-1-(1-CARBAMOYL-2-PHENYL-ETHYLCARBAMOYL)-(S)-PROPYLCARBAMOYL]-2-OXO-5-PHENYL-PENTYL}-CARBAMIC ACID TERT-BUTYL ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O49 C48 Q50 doub 277 n n 
C48 N50 Q50 sing 278 n n 
C48 C40 Q50 sing 279 n n 
N50 H501 Q50 sing 280 n n 
N50 H502 Q50 sing 281 n n 
C40 C41 Q50 sing 282 n n 
C40 N39 Q50 sing 283 n n 
C40 H40 Q50 sing 284 n n 
C41 C42 Q50 sing 285 n n 
C41 H411 Q50 sing 286 n n 
C41 H412 Q50 sing 287 n n 
C42 C43 Q50 doub 288 n y 
C42 C47 Q50 sing 289 n y 
C43 C44 Q50 sing 290 n y 
C43 H43 Q50 sing 291 n n 
C44 C45 Q50 doub 292 n y 
C44 H44 Q50 sing 293 n n 
C45 C46 Q50 sing 294 n y 
C45 H45 Q50 sing 295 n n 
C46 C47 Q50 doub 296 n y 
C46 H46 Q50 sing 297 n n 
C47 H47 Q50 sing 298 n n 
N39 C37 Q50 sing 299 n n 
N39 H39 Q50 sing 300 n n 
C37 O38 Q50 doub 301 n n 
C37 C31 Q50 sing 302 n n 
C31 C32 Q50 sing 303 n n 
C31 N30 Q50 sing 304 n n 
C31 H31 Q50 sing 305 n n 
C32 C33 Q50 sing 306 n n 
C32 H321 Q50 sing 307 n n 
C32 H322 Q50 sing 308 n n 
C33 C34 Q50 sing 309 n n 
C33 H331 Q50 sing 310 n n 
C33 H332 Q50 sing 311 n n 
C34 O35 Q50 doub 312 n n 
C34 N36 Q50 sing 313 n n 
N36 H361 Q50 sing 314 n n 
N36 H362 Q50 sing 315 n n 
N30 C28 Q50 sing 316 n n 
N30 H30 Q50 sing 317 n n 
C28 O29 Q50 doub 318 n n 
C28 C20 Q50 sing 319 n n 
C20 C21 Q50 sing 320 n n 
C20 C19 Q50 sing 321 n n 
C20 H20 Q50 sing 322 n n 
C21 C22 Q50 sing 323 n n 
C21 H211 Q50 sing 324 n n 
C21 H212 Q50 sing 325 n n 
C22 C23 Q50 doub 326 n y 
C22 C27 Q50 sing 327 n y 
C23 C24 Q50 sing 328 n y 
C23 H23 Q50 sing 329 n n 
C24 C25 Q50 doub 330 n y 
C24 H24 Q50 sing 331 n n 
C25 C26 Q50 sing 332 n y 
C25 H25 Q50 sing 333 n n 
C26 C27 Q50 doub 334 n y 
C26 H26 Q50 sing 335 n n 
C27 H27 Q50 sing 336 n n 
C19 C17 Q50 sing 337 n n 
C19 H191 Q50 sing 338 n n 
C19 H192 Q50 sing 339 n n 
C17 O18 Q50 doub 340 n n 
C17 C9 Q50 sing 341 n n 
C9 N8 Q50 sing 342 n n 
C9 C10 Q50 sing 343 n n 
C9 H9 Q50 sing 344 n n 
N8 C6 Q50 sing 345 n n 
N8 HN8 Q50 sing 346 n n 
C6 O7 Q50 doub 347 n n 
C6 O5 Q50 sing 348 n n 
O5 C1 Q50 sing 349 n n 
C1 C4 Q50 sing 350 n n 
C1 C3 Q50 sing 351 n n 
C1 C2 Q50 sing 352 n n 
C4 H41 Q50 sing 353 n n 
C4 H42 Q50 sing 354 n n 
C4 H43A Q50 sing 355 n n 
C3 H31A Q50 sing 356 n n 
C3 H32 Q50 sing 357 n n 
C3 H33 Q50 sing 358 n n 
C2 H21 Q50 sing 359 n n 
C2 H22 Q50 sing 360 n n 
C2 H23A Q50 sing 361 n n 
C10 C11 Q50 sing 362 n n 
C10 H101 Q50 sing 363 n n 
C10 H102 Q50 sing 364 n n 
C11 C12 Q50 doub 365 n y 
C11 C16 Q50 sing 366 n y 
C12 C13 Q50 sing 367 n y 
C12 H12 Q50 sing 368 n n 
C13 C14 Q50 doub 369 n y 
C13 H13 Q50 sing 370 n n 
C14 C15 Q50 sing 371 n y 
C14 H14 Q50 sing 372 n n 
C15 C16 Q50 doub 373 n y 
C15 H15 Q50 sing 374 n n 
C16 H16 Q50 sing 375 n n 
#
_atom_sites.entry_id                     1IZI 
_atom_sites.fract_transf_matrix[1][1]    0.016184 
_atom_sites.fract_transf_matrix[1][2]    0.009344 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018688 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012074 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CL A 1 100 1 CL CL . 
D 2 CL B 1 100 2 CL CL . 
E 3 Q50 B 1 1001 1 Q50 Q50 . 
F 4 HOH A 1 101 4 HOH HOH . 
F 4 HOH A 2 102 7 HOH HOH . 
F 4 HOH A 3 103 10 HOH HOH . 
F 4 HOH A 4 104 13 HOH HOH . 
F 4 HOH A 5 105 14 HOH HOH . 
F 4 HOH A 6 106 15 HOH HOH . 
F 4 HOH A 7 107 18 HOH HOH . 
F 4 HOH A 8 108 21 HOH HOH . 
F 4 HOH A 9 109 23 HOH HOH . 
F 4 HOH A 10 110 24 HOH HOH . 
F 4 HOH A 11 111 25 HOH HOH . 
F 4 HOH A 12 112 27 HOH HOH . 
F 4 HOH A 13 113 30 HOH HOH . 
F 4 HOH A 14 114 32 HOH HOH . 
F 4 HOH A 15 115 35 HOH HOH . 
F 4 HOH A 16 116 37 HOH HOH . 
F 4 HOH A 17 117 39 HOH HOH . 
F 4 HOH A 18 118 41 HOH HOH . 
F 4 HOH A 19 119 43 HOH HOH . 
F 4 HOH A 20 120 44 HOH HOH . 
F 4 HOH A 21 121 48 HOH HOH . 
G 4 HOH B 1 1002 3 HOH HOH . 
G 4 HOH B 2 1003 5 HOH HOH . 
G 4 HOH B 3 1004 6 HOH HOH . 
G 4 HOH B 4 1005 8 HOH HOH . 
G 4 HOH B 5 1006 9 HOH HOH . 
G 4 HOH B 6 1007 11 HOH HOH . 
G 4 HOH B 7 1008 12 HOH HOH . 
G 4 HOH B 8 1009 16 HOH HOH . 
G 4 HOH B 9 1010 17 HOH HOH . 
G 4 HOH B 10 1011 19 HOH HOH . 
G 4 HOH B 11 1012 20 HOH HOH . 
G 4 HOH B 12 1013 22 HOH HOH . 
G 4 HOH B 13 1014 26 HOH HOH . 
G 4 HOH B 14 1015 28 HOH HOH . 
G 4 HOH B 15 1016 31 HOH HOH . 
G 4 HOH B 16 1017 33 HOH HOH . 
G 4 HOH B 17 1018 36 HOH HOH . 
G 4 HOH B 18 1019 38 HOH HOH . 
G 4 HOH B 19 1020 42 HOH HOH . 
G 4 HOH B 20 1021 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O49 Q50 . . . E 3 -3.953 14.66 -7.644 1 56.35 ? O49 Q50 1001 B 1 
HETATM 2 C C48 Q50 . . . E 3 -4.293 15.84 -7.791 1 56.48 ? C48 Q50 1001 B 1 
HETATM 3 N N50 Q50 . . . E 3 -4.56 16.331 -9.011 1 58.69 ? N50 Q50 1001 B 1 
HETATM 4 C C40 Q50 . . . E 3 -4.485 16.857 -6.645 1 54.61 ? C40 Q50 1001 B 1 
HETATM 5 C C41 Q50 . . . E 3 -3.178 17.316 -5.945 1 54.58 ? C41 Q50 1001 B 1 
HETATM 6 C C42 Q50 . . . E 3 -2.293 16.227 -5.33 1 56.13 ? C42 Q50 1001 B 1 
HETATM 7 C C43 Q50 . . . E 3 -2.621 15.597 -4.133 1 55.92 ? C43 Q50 1001 B 1 
HETATM 8 C C44 Q50 . . . E 3 -1.759 14.647 -3.564 1 56.15 ? C44 Q50 1001 B 1 
HETATM 9 C C45 Q50 . . . E 3 -0.551 14.301 -4.145 1 55.39 ? C45 Q50 1001 B 1 
HETATM 10 C C46 Q50 . . . E 3 -0.212 14.93 -5.327 1 56.41 ? C46 Q50 1001 B 1 
HETATM 11 C C47 Q50 . . . E 3 -1.055 15.885 -5.904 1 56.48 ? C47 Q50 1001 B 1 
HETATM 12 N N39 Q50 . . . E 3 -5.432 16.34 -5.642 1 50.6 ? N39 Q50 1001 B 1 
HETATM 13 C C37 Q50 . . . E 3 -6.434 17.055 -5.088 1 47.01 ? C37 Q50 1001 B 1 
HETATM 14 O O38 Q50 . . . E 3 -6.561 18.27 -5.393 1 44.72 ? O38 Q50 1001 B 1 
HETATM 15 C C31 Q50 . . . E 3 -7.309 16.197 -4.095 1 45.05 ? C31 Q50 1001 B 1 
HETATM 16 C C32 Q50 . . . E 3 -8.61 15.64 -4.607 1 44.9 ? C32 Q50 1001 B 1 
HETATM 17 C C33 Q50 . . . E 3 -8.316 14.761 -5.795 1 46.18 ? C33 Q50 1001 B 1 
HETATM 18 C C34 Q50 . . . E 3 -8.342 15.669 -6.972 1 48.06 ? C34 Q50 1001 B 1 
HETATM 19 O O35 Q50 . . . E 3 -9.038 16.653 -6.941 1 48.56 ? O35 Q50 1001 B 1 
HETATM 20 N N36 Q50 . . . E 3 -7.568 15.371 -8.018 1 51.57 ? N36 Q50 1001 B 1 
HETATM 21 N N30 Q50 . . . E 3 -7.655 16.904 -2.889 1 43.43 ? N30 Q50 1001 B 1 
HETATM 22 C C28 Q50 . . . E 3 -7.557 16.332 -1.726 1 42.03 ? C28 Q50 1001 B 1 
HETATM 23 O O29 Q50 . . . E 3 -7.282 15.135 -1.6 1 44.11 ? O29 Q50 1001 B 1 
HETATM 24 C C20 Q50 . . . E 3 -7.861 17.293 -0.624 1 40.59 ? C20 Q50 1001 B 1 
HETATM 25 C C21 Q50 . . . E 3 -6.618 17.782 0.127 1 40.93 ? C21 Q50 1001 B 1 
HETATM 26 C C22 Q50 . . . E 3 -5.311 17.805 -0.642 1 42.96 ? C22 Q50 1001 B 1 
HETATM 27 C C23 Q50 . . . E 3 -4.313 16.87 -0.333 1 43.79 ? C23 Q50 1001 B 1 
HETATM 28 C C24 Q50 . . . E 3 -3.101 16.915 -1.032 1 44.53 ? C24 Q50 1001 B 1 
HETATM 29 C C25 Q50 . . . E 3 -2.824 17.896 -2.009 1 44.35 ? C25 Q50 1001 B 1 
HETATM 30 C C26 Q50 . . . E 3 -3.805 18.832 -2.311 1 45.05 ? C26 Q50 1001 B 1 
HETATM 31 C C27 Q50 . . . E 3 -5.034 18.791 -1.615 1 44.14 ? C27 Q50 1001 B 1 
HETATM 32 C C19 Q50 . . . E 3 -8.703 16.588 0.392 1 39.07 ? C19 Q50 1001 B 1 
HETATM 33 C C17 Q50 . . . E 3 -10.12 16.503 -0.071 1 39.14 ? C17 Q50 1001 B 1 
HETATM 34 O O18 Q50 . . . E 3 -10.544 17.864 0.222 1 35.58 ? O18 Q50 1001 B 1 
HETATM 35 C C9 Q50 . . . E 3 -10.722 15.236 0.586 1 40.06 ? C9 Q50 1001 B 1 
HETATM 36 N N8 Q50 . . . E 3 -10.788 15.439 2.055 1 41.59 ? N8 Q50 1001 B 1 
HETATM 37 C C6 Q50 . . . E 3 -9.993 14.72 2.897 1 42.64 ? C6 Q50 1001 B 1 
HETATM 38 O O7 Q50 . . . E 3 -9.279 13.892 2.321 1 45.26 ? O7 Q50 1001 B 1 
HETATM 39 O O5 Q50 . . . E 3 -10.004 14.898 4.398 1 39.88 ? O5 Q50 1001 B 1 
HETATM 40 C C1 Q50 . . . E 3 -9.038 14.994 5.525 1 38.24 ? C1 Q50 1001 B 1 
HETATM 41 C C4 Q50 . . . E 3 -7.829 15.847 5.234 1 41.09 ? C4 Q50 1001 B 1 
HETATM 42 C C3 Q50 . . . E 3 -8.577 13.661 6.052 1 39.51 ? C3 Q50 1001 B 1 
HETATM 43 C C2 Q50 . . . E 3 -9.678 15.555 6.78 1 36.92 ? C2 Q50 1001 B 1 
HETATM 44 C C10 Q50 . . . E 3 -12.086 14.792 0.002 1 39.64 ? C10 Q50 1001 B 1 
HETATM 45 C C11 Q50 . . . E 3 -12.678 13.578 0.701 1 40.96 ? C11 Q50 1001 B 1 
HETATM 46 C C12 Q50 . . . E 3 -13.716 13.735 1.659 1 41.68 ? C12 Q50 1001 B 1 
HETATM 47 C C13 Q50 . . . E 3 -14.283 12.648 2.346 1 42.72 ? C13 Q50 1001 B 1 
HETATM 48 C C14 Q50 . . . E 3 -13.84 11.351 2.092 1 42.65 ? C14 Q50 1001 B 1 
HETATM 49 C C15 Q50 . . . E 3 -12.823 11.177 1.124 1 42.9 ? C15 Q50 1001 B 1 
HETATM 50 C C16 Q50 . . . E 3 -12.246 12.263 0.418 1 42.95 ? C16 Q50 1001 B 1 
#
_model_server_stats.io_time_ms              65 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           50 
#