data_1J17 # _model_server_result.job_id ApckcmRVxNt3IwZvRGLYNQ _model_server_result.datetime_utc '2024-11-07 11:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j17 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":480}' # _entry.id 1J17 # _exptl.entry_id 1J17 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1J17 _cell.length_a 124.78 _cell.length_b 124.78 _cell.length_c 124.78 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J17 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 7 T CYS 22 1_555 A SG CYS 137 T CYS 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf2 A SG CYS 25 T CYS 42 1_555 A SG CYS 41 T CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf3 A SG CYS 109 T CYS 128 1_555 A SG CYS 210 T CYS 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 A SG CYS 116 T CYS 136 1_555 A SG CYS 183 T CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf5 A SG CYS 148 T CYS 168 1_555 A SG CYS 162 T CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf6 A SG CYS 173 T CYS 191 1_555 A SG CYS 197 T CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc1 A OE1 GLU 52 T GLU 70 1_555 B CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc2 A O ASN 54 T ASN 72 1_555 B CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc3 A O VAL 57 T VAL 75 1_555 B CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc4 A OE1 GLU 59 T GLU 77 1_555 B CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc5 A OE2 GLU 62 T GLU 80 1_555 B CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc6 E O HOH . T HOH 261 1_555 B CA CA . T CA 480 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1J17 _atom_sites.fract_transf_matrix[1][1] 0.008014 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008014 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008014 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA T 1 480 480 CA CAL . C 3 SO4 T 1 600 600 SO4 SO4 . D 4 ZEN T 1 1 1 ZEN ZEN . E 5 HOH T 1 249 249 HOH H2O . E 5 HOH T 2 250 250 HOH H2O . E 5 HOH T 3 251 251 HOH H2O . E 5 HOH T 4 252 252 HOH H2O . E 5 HOH T 5 253 253 HOH H2O . E 5 HOH T 6 255 255 HOH H2O . E 5 HOH T 7 256 256 HOH H2O . E 5 HOH T 8 257 257 HOH H2O . E 5 HOH T 9 259 259 HOH H2O . E 5 HOH T 10 260 260 HOH H2O . E 5 HOH T 11 261 261 HOH H2O . E 5 HOH T 12 262 262 HOH H2O . E 5 HOH T 13 264 264 HOH H2O . E 5 HOH T 14 266 266 HOH H2O . E 5 HOH T 15 267 267 HOH H2O . E 5 HOH T 16 269 269 HOH H2O . E 5 HOH T 17 272 272 HOH H2O . E 5 HOH T 18 273 273 HOH H2O . E 5 HOH T 19 275 275 HOH H2O . E 5 HOH T 20 276 276 HOH H2O . E 5 HOH T 21 280 280 HOH H2O . E 5 HOH T 22 281 281 HOH H2O . E 5 HOH T 23 282 282 HOH H2O . E 5 HOH T 24 283 283 HOH H2O . E 5 HOH T 25 284 284 HOH H2O . E 5 HOH T 26 286 286 HOH H2O . E 5 HOH T 27 287 287 HOH H2O . E 5 HOH T 28 288 288 HOH H2O . E 5 HOH T 29 292 292 HOH H2O . E 5 HOH T 30 294 294 HOH H2O . E 5 HOH T 31 298 298 HOH H2O . E 5 HOH T 32 303 303 HOH H2O . E 5 HOH T 33 305 305 HOH H2O . E 5 HOH T 34 306 306 HOH H2O . E 5 HOH T 35 307 307 HOH H2O . E 5 HOH T 36 309 309 HOH H2O . E 5 HOH T 37 311 311 HOH H2O . E 5 HOH T 38 313 313 HOH H2O . E 5 HOH T 39 314 314 HOH H2O . E 5 HOH T 40 318 318 HOH H2O . E 5 HOH T 41 319 319 HOH H2O . E 5 HOH T 42 320 320 HOH H2O . E 5 HOH T 43 324 324 HOH H2O . E 5 HOH T 44 327 327 HOH H2O . E 5 HOH T 45 329 329 HOH H2O . E 5 HOH T 46 332 332 HOH H2O . E 5 HOH T 47 335 335 HOH H2O . E 5 HOH T 48 341 341 HOH H2O . E 5 HOH T 49 342 342 HOH H2O . E 5 HOH T 50 343 343 HOH H2O . E 5 HOH T 51 347 347 HOH H2O . E 5 HOH T 52 350 350 HOH H2O . E 5 HOH T 53 358 358 HOH H2O . E 5 HOH T 54 370 370 HOH H2O . E 5 HOH T 55 371 371 HOH H2O . E 5 HOH T 56 377 377 HOH H2O . E 5 HOH T 57 385 385 HOH H2O . E 5 HOH T 58 416 416 HOH H2O . E 5 HOH T 59 502 502 HOH H2O . E 5 HOH T 60 562 562 HOH H2O . E 5 HOH T 61 705 705 HOH H2O . E 5 HOH T 62 723 723 HOH H2O . E 5 HOH T 63 724 724 HOH H2O . E 5 HOH T 64 725 725 HOH H2O . E 5 HOH T 65 726 726 HOH H2O . E 5 HOH T 66 727 727 HOH H2O . E 5 HOH T 67 728 728 HOH H2O . E 5 HOH T 68 729 729 HOH H2O . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.256 _atom_site.Cartn_y 34.02 _atom_site.Cartn_z 45.89 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 24.4 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 480 _atom_site.auth_asym_id T _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #