data_1J1Y # _model_server_result.job_id VVJ2ms7PJM3IJwlyeWMF7g _model_server_result.datetime_utc '2024-11-13 11:50:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j1y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1002}' # _entry.id 1J1Y # _exptl.entry_id 1J1Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1J1Y _cell.length_a 57.877 _cell.length_b 57.877 _cell.length_c 139.607 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 95 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 5_655 -x+1,y,-z -1 0 0 0 1 0 0 0 -1 57.877 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc2 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1003 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc3 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc4 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1004 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc5 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1005 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.076 ? metalc ? metalc6 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1005 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.077 ? metalc ? metalc7 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1006 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc8 D MG MG . A MG 1002 1_555 E O HOH . A HOH 1006 5_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1J1Y _atom_sites.fract_transf_matrix[1][1] 0.017278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017278 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007163 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 1001 1001 CL CL . D 3 MG A 1 1002 1002 MG MG . E 4 HOH A 1 1003 1 HOH HOH . E 4 HOH A 2 1004 2 HOH HOH . E 4 HOH A 3 1005 3 HOH HOH . E 4 HOH A 4 1006 4 HOH HOH . E 4 HOH A 5 1007 5 HOH HOH . E 4 HOH A 6 1008 6 HOH HOH . E 4 HOH A 7 1009 7 HOH HOH . E 4 HOH A 8 1010 8 HOH HOH . E 4 HOH A 9 1011 9 HOH HOH . E 4 HOH A 10 1012 10 HOH HOH . E 4 HOH A 11 1013 11 HOH HOH . E 4 HOH A 12 1014 12 HOH HOH . E 4 HOH A 13 1015 13 HOH HOH . E 4 HOH A 14 1016 14 HOH HOH . E 4 HOH A 15 1017 15 HOH HOH . E 4 HOH A 16 1018 16 HOH HOH . E 4 HOH A 17 1019 17 HOH HOH . E 4 HOH A 18 1020 18 HOH HOH . E 4 HOH A 19 1021 19 HOH HOH . E 4 HOH A 20 1022 20 HOH HOH . E 4 HOH A 21 1023 21 HOH HOH . E 4 HOH A 22 1024 22 HOH HOH . E 4 HOH A 23 1025 23 HOH HOH . E 4 HOH A 24 1026 24 HOH HOH . E 4 HOH A 25 1027 25 HOH HOH . E 4 HOH A 26 1028 26 HOH HOH . E 4 HOH A 27 1029 27 HOH HOH . E 4 HOH A 28 1030 28 HOH HOH . E 4 HOH A 29 1031 29 HOH HOH . E 4 HOH A 30 1032 30 HOH HOH . E 4 HOH A 31 1033 31 HOH HOH . E 4 HOH A 32 1034 32 HOH HOH . E 4 HOH A 33 1035 33 HOH HOH . E 4 HOH A 34 1036 34 HOH HOH . E 4 HOH A 35 1037 35 HOH HOH . E 4 HOH A 36 1038 36 HOH HOH . E 4 HOH A 37 1039 37 HOH HOH . E 4 HOH A 38 1040 38 HOH HOH . E 4 HOH A 39 1041 39 HOH HOH . E 4 HOH A 40 1042 40 HOH HOH . E 4 HOH A 41 1043 41 HOH HOH . E 4 HOH A 42 1044 42 HOH HOH . E 4 HOH A 43 1045 43 HOH HOH . E 4 HOH A 44 1046 44 HOH HOH . E 4 HOH A 45 1047 45 HOH HOH . E 4 HOH A 46 1048 46 HOH HOH . E 4 HOH A 47 1049 47 HOH HOH . E 4 HOH A 48 1050 48 HOH HOH . E 4 HOH A 49 1051 49 HOH HOH . E 4 HOH A 50 1052 50 HOH HOH . E 4 HOH A 51 1053 51 HOH HOH . E 4 HOH A 52 1054 52 HOH HOH . E 4 HOH A 53 1055 53 HOH HOH . E 4 HOH A 54 1056 54 HOH HOH . E 4 HOH A 55 1057 55 HOH HOH . E 4 HOH A 56 1058 56 HOH HOH . E 4 HOH A 57 1059 57 HOH HOH . E 4 HOH A 58 1060 58 HOH HOH . E 4 HOH A 59 1061 59 HOH HOH . E 4 HOH A 60 1062 60 HOH HOH . E 4 HOH A 61 1063 61 HOH HOH . E 4 HOH A 62 1064 62 HOH HOH . E 4 HOH A 63 1065 63 HOH HOH . E 4 HOH A 64 1066 64 HOH HOH . E 4 HOH A 65 1067 65 HOH HOH . E 4 HOH A 66 1068 66 HOH HOH . E 4 HOH A 67 1069 67 HOH HOH . E 4 HOH A 68 1070 68 HOH HOH . E 4 HOH A 69 1071 69 HOH HOH . E 4 HOH A 70 1072 70 HOH HOH . E 4 HOH A 71 1073 71 HOH HOH . E 4 HOH A 72 1074 72 HOH HOH . E 4 HOH A 73 1075 73 HOH HOH . E 4 HOH A 74 1076 74 HOH HOH . E 4 HOH A 75 1077 75 HOH HOH . E 4 HOH A 76 1078 76 HOH HOH . E 4 HOH A 77 1079 77 HOH HOH . E 4 HOH A 78 1080 78 HOH HOH . E 4 HOH A 79 1081 80 HOH HOH . E 4 HOH A 80 1082 81 HOH HOH . E 4 HOH A 81 1083 82 HOH HOH . E 4 HOH A 82 1084 83 HOH HOH . E 4 HOH A 83 1085 84 HOH HOH . E 4 HOH A 84 1086 85 HOH HOH . E 4 HOH A 85 1087 86 HOH HOH . E 4 HOH A 86 1088 87 HOH HOH . E 4 HOH A 87 1089 88 HOH HOH . E 4 HOH A 88 1090 89 HOH HOH . E 4 HOH A 89 1091 90 HOH HOH . E 4 HOH A 90 1092 91 HOH HOH . E 4 HOH A 91 1093 92 HOH HOH . E 4 HOH A 92 1094 93 HOH HOH . E 4 HOH A 93 1095 95 HOH HOH . E 4 HOH A 94 1096 96 HOH HOH . E 4 HOH A 95 1097 97 HOH HOH . E 4 HOH A 96 1098 98 HOH HOH . E 4 HOH A 97 1099 99 HOH HOH . E 4 HOH A 98 1100 100 HOH HOH . E 4 HOH A 99 1101 104 HOH HOH . E 4 HOH A 100 1102 121 HOH HOH . E 4 HOH A 101 1103 145 HOH HOH . E 4 HOH A 102 1104 146 HOH HOH . E 4 HOH A 103 1105 149 HOH HOH . E 4 HOH A 104 1106 161 HOH HOH . E 4 HOH A 105 1107 168 HOH HOH . E 4 HOH A 106 1108 185 HOH HOH . E 4 HOH A 107 1109 195 HOH HOH . E 4 HOH A 108 1110 196 HOH HOH . F 4 HOH B 1 137 79 HOH HOH . F 4 HOH B 2 138 94 HOH HOH . F 4 HOH B 3 139 101 HOH HOH . F 4 HOH B 4 140 102 HOH HOH . F 4 HOH B 5 141 103 HOH HOH . F 4 HOH B 6 142 105 HOH HOH . F 4 HOH B 7 143 106 HOH HOH . F 4 HOH B 8 144 107 HOH HOH . F 4 HOH B 9 145 108 HOH HOH . F 4 HOH B 10 146 109 HOH HOH . F 4 HOH B 11 147 110 HOH HOH . F 4 HOH B 12 148 111 HOH HOH . F 4 HOH B 13 149 112 HOH HOH . F 4 HOH B 14 150 113 HOH HOH . F 4 HOH B 15 151 114 HOH HOH . F 4 HOH B 16 152 115 HOH HOH . F 4 HOH B 17 153 116 HOH HOH . F 4 HOH B 18 154 117 HOH HOH . F 4 HOH B 19 155 118 HOH HOH . F 4 HOH B 20 156 119 HOH HOH . F 4 HOH B 21 157 120 HOH HOH . F 4 HOH B 22 158 122 HOH HOH . F 4 HOH B 23 159 123 HOH HOH . F 4 HOH B 24 160 124 HOH HOH . F 4 HOH B 25 161 125 HOH HOH . F 4 HOH B 26 162 126 HOH HOH . F 4 HOH B 27 163 127 HOH HOH . F 4 HOH B 28 164 128 HOH HOH . F 4 HOH B 29 165 129 HOH HOH . F 4 HOH B 30 166 130 HOH HOH . F 4 HOH B 31 167 131 HOH HOH . F 4 HOH B 32 168 132 HOH HOH . F 4 HOH B 33 169 133 HOH HOH . F 4 HOH B 34 170 134 HOH HOH . F 4 HOH B 35 171 135 HOH HOH . F 4 HOH B 36 172 136 HOH HOH . F 4 HOH B 37 173 137 HOH HOH . F 4 HOH B 38 174 138 HOH HOH . F 4 HOH B 39 175 139 HOH HOH . F 4 HOH B 40 176 140 HOH HOH . F 4 HOH B 41 177 141 HOH HOH . F 4 HOH B 42 178 142 HOH HOH . F 4 HOH B 43 179 143 HOH HOH . F 4 HOH B 44 180 144 HOH HOH . F 4 HOH B 45 181 147 HOH HOH . F 4 HOH B 46 182 148 HOH HOH . F 4 HOH B 47 183 150 HOH HOH . F 4 HOH B 48 184 151 HOH HOH . F 4 HOH B 49 185 152 HOH HOH . F 4 HOH B 50 186 153 HOH HOH . F 4 HOH B 51 187 154 HOH HOH . F 4 HOH B 52 188 155 HOH HOH . F 4 HOH B 53 189 156 HOH HOH . F 4 HOH B 54 190 157 HOH HOH . F 4 HOH B 55 191 158 HOH HOH . F 4 HOH B 56 192 159 HOH HOH . F 4 HOH B 57 193 160 HOH HOH . F 4 HOH B 58 194 162 HOH HOH . F 4 HOH B 59 195 163 HOH HOH . F 4 HOH B 60 196 164 HOH HOH . F 4 HOH B 61 197 165 HOH HOH . F 4 HOH B 62 198 166 HOH HOH . F 4 HOH B 63 199 167 HOH HOH . F 4 HOH B 64 200 169 HOH HOH . F 4 HOH B 65 201 170 HOH HOH . F 4 HOH B 66 202 171 HOH HOH . F 4 HOH B 67 203 172 HOH HOH . F 4 HOH B 68 204 173 HOH HOH . F 4 HOH B 69 205 174 HOH HOH . F 4 HOH B 70 206 175 HOH HOH . F 4 HOH B 71 207 176 HOH HOH . F 4 HOH B 72 208 177 HOH HOH . F 4 HOH B 73 209 178 HOH HOH . F 4 HOH B 74 210 179 HOH HOH . F 4 HOH B 75 211 180 HOH HOH . F 4 HOH B 76 212 181 HOH HOH . F 4 HOH B 77 213 182 HOH HOH . F 4 HOH B 78 214 183 HOH HOH . F 4 HOH B 79 215 184 HOH HOH . F 4 HOH B 80 216 186 HOH HOH . F 4 HOH B 81 217 187 HOH HOH . F 4 HOH B 82 218 188 HOH HOH . F 4 HOH B 83 219 189 HOH HOH . F 4 HOH B 84 220 190 HOH HOH . F 4 HOH B 85 221 191 HOH HOH . F 4 HOH B 86 222 192 HOH HOH . F 4 HOH B 87 223 193 HOH HOH . F 4 HOH B 88 224 194 HOH HOH . F 4 HOH B 89 225 197 HOH HOH . F 4 HOH B 90 226 198 HOH HOH . F 4 HOH B 91 227 199 HOH HOH . F 4 HOH B 92 228 200 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 28.939 _atom_site.Cartn_y 27.927 _atom_site.Cartn_z 0 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 8.48 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 1002 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #