data_1J2C
#
_model_server_result.job_id            jT6i9yoProf6VMKhPIfk3Q 
_model_server_result.datetime_utc      '2025-09-10 18:35:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1j2c 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":300}' 
#
_entry.id    1J2C 
#
_exptl.entry_id    1J2C 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              582.646 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'BILIVERDINE IX ALPHA' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1J2C 
_cell.length_a            65.4 
_cell.length_b            65.4 
_cell.length_c            121.3 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1J2C 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 25 A HIS 25 1_555 B FE FE . A FE 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? 
metalc ? metalc2 C NC BLA . A BLA 300 1_555 B FE FE . A FE 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc3 C ND BLA . A BLA 300 1_555 B FE FE . A FE 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? 
metalc ? metalc4 C NB BLA . A BLA 300 1_555 B FE FE . A FE 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? 
metalc ? metalc5 C NA BLA . A BLA 300 1_555 B FE FE . A FE 1300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
#
_chem_comp.formula           'C33 H34 N4 O6' 
_chem_comp.formula_weight    582.646 
_chem_comp.id                BLA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'BILIVERDINE IX ALPHA' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A BLA sing 70 n n 
CHA C4D BLA doub 71 z n 
CHA HHA BLA sing 72 n n 
NA C1A BLA sing 73 n y 
NA C4A BLA sing 74 n y 
NA HA BLA sing 75 n n 
C1A C2A BLA doub 76 n y 
C2A C3A BLA sing 77 n y 
C2A CAA BLA sing 78 n n 
C3A C4A BLA doub 79 n y 
C3A CMA BLA sing 80 n n 
C4A CHB BLA sing 81 n n 
CMA HMA1 BLA sing 82 n n 
CMA HMA2 BLA sing 83 n n 
CMA HMA3 BLA sing 84 n n 
CAA CBA BLA sing 85 n n 
CAA HAA1 BLA sing 86 n n 
CAA HAA2 BLA sing 87 n n 
CBA CGA BLA sing 88 n n 
CBA HBA1 BLA sing 89 n n 
CBA HBA2 BLA sing 90 n n 
CGA O1A BLA doub 91 n n 
CGA O2A BLA sing 92 n n 
O2A H2A BLA sing 93 n n 
CHB C1B BLA doub 94 z n 
CHB HHB BLA sing 95 n n 
NB C1B BLA sing 96 n n 
NB C4B BLA sing 97 n n 
NB HB BLA sing 98 n n 
C1B C2B BLA sing 99 n n 
C2B C3B BLA doub 100 n n 
C2B CMB BLA sing 101 n n 
C3B C4B BLA sing 102 n n 
C3B CAB BLA sing 103 n n 
C4B OB BLA doub 104 n n 
CMB HMB1 BLA sing 105 n n 
CMB HMB2 BLA sing 106 n n 
CMB HMB3 BLA sing 107 n n 
CAB CBB BLA doub 108 n n 
CAB HAB BLA sing 109 n n 
CBB HBB1 BLA sing 110 n n 
CBB HBB2 BLA sing 111 n n 
NC C1C BLA sing 112 n n 
NC C4C BLA sing 113 n n 
NC HC BLA sing 114 n n 
C1C C2C BLA sing 115 n n 
C1C OC BLA doub 116 n n 
C2C C3C BLA doub 117 n n 
C2C CMC BLA sing 118 n n 
C3C C4C BLA sing 119 n n 
C3C CAC BLA sing 120 n n 
C4C CHD BLA doub 121 z n 
CMC HMC1 BLA sing 122 n n 
CMC HMC2 BLA sing 123 n n 
CMC HMC3 BLA sing 124 n n 
CAC CBC BLA doub 125 n n 
CAC HAC BLA sing 126 n n 
CBC HBC1 BLA sing 127 n n 
CBC HBC2 BLA sing 128 n n 
CHD C1D BLA sing 129 n n 
CHD HHD BLA sing 130 n n 
ND C1D BLA doub 131 n n 
ND C4D BLA sing 132 n n 
C1D C2D BLA sing 133 n n 
C2D C3D BLA doub 134 n n 
C2D CMD BLA sing 135 n n 
C3D C4D BLA sing 136 n n 
C3D CAD BLA sing 137 n n 
CMD HMD1 BLA sing 138 n n 
CMD HMD2 BLA sing 139 n n 
CMD HMD3 BLA sing 140 n n 
CAD CBD BLA sing 141 n n 
CAD HAD1 BLA sing 142 n n 
CAD HAD2 BLA sing 143 n n 
CBD CGD BLA sing 144 n n 
CBD HBD1 BLA sing 145 n n 
CBD HBD2 BLA sing 146 n n 
CGD O1D BLA doub 147 n n 
CGD O2D BLA sing 148 n n 
O2D H2D BLA sing 149 n n 
#
_atom_sites.entry_id                     1J2C 
_atom_sites.fract_transf_matrix[1][1]    0.015291 
_atom_sites.fract_transf_matrix[1][2]    0.008828 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017656 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008244 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FE A 1 1300 300 FE BLA . 
C 3 BLA A 1 300 300 BLA BLA . 
D 4 HOH A 1 1301 2 HOH TIP . 
D 4 HOH A 2 1302 3 HOH TIP . 
D 4 HOH A 3 1303 4 HOH TIP . 
D 4 HOH A 4 1304 5 HOH TIP . 
D 4 HOH A 5 1305 6 HOH TIP . 
D 4 HOH A 6 1306 7 HOH TIP . 
D 4 HOH A 7 1307 8 HOH TIP . 
D 4 HOH A 8 1308 9 HOH TIP . 
D 4 HOH A 9 1309 10 HOH TIP . 
D 4 HOH A 10 1310 11 HOH TIP . 
D 4 HOH A 11 1311 12 HOH TIP . 
D 4 HOH A 12 1312 13 HOH TIP . 
D 4 HOH A 13 1313 14 HOH TIP . 
D 4 HOH A 14 1314 15 HOH TIP . 
D 4 HOH A 15 1315 16 HOH TIP . 
D 4 HOH A 16 1316 17 HOH TIP . 
D 4 HOH A 17 1317 18 HOH TIP . 
D 4 HOH A 18 1318 19 HOH TIP . 
D 4 HOH A 19 1319 20 HOH TIP . 
D 4 HOH A 20 1320 21 HOH TIP . 
D 4 HOH A 21 1321 22 HOH TIP . 
D 4 HOH A 22 1322 23 HOH TIP . 
D 4 HOH A 23 1323 24 HOH TIP . 
D 4 HOH A 24 1324 25 HOH TIP . 
D 4 HOH A 25 1325 26 HOH TIP . 
D 4 HOH A 26 1326 27 HOH TIP . 
D 4 HOH A 27 1327 28 HOH TIP . 
D 4 HOH A 28 1328 29 HOH TIP . 
D 4 HOH A 29 1329 30 HOH TIP . 
D 4 HOH A 30 1330 31 HOH TIP . 
D 4 HOH A 31 1331 32 HOH TIP . 
D 4 HOH A 32 1332 33 HOH TIP . 
D 4 HOH A 33 1333 34 HOH TIP . 
D 4 HOH A 34 1334 35 HOH TIP . 
D 4 HOH A 35 1335 36 HOH TIP . 
D 4 HOH A 36 1336 37 HOH TIP . 
D 4 HOH A 37 1337 38 HOH TIP . 
D 4 HOH A 38 1338 39 HOH TIP . 
D 4 HOH A 39 1339 40 HOH TIP . 
D 4 HOH A 40 1340 41 HOH TIP . 
D 4 HOH A 41 1341 42 HOH TIP . 
D 4 HOH A 42 1342 43 HOH TIP . 
D 4 HOH A 43 1343 44 HOH TIP . 
D 4 HOH A 44 1344 46 HOH TIP . 
D 4 HOH A 45 1345 47 HOH TIP . 
D 4 HOH A 46 1346 48 HOH TIP . 
D 4 HOH A 47 1347 49 HOH TIP . 
D 4 HOH A 48 1348 50 HOH TIP . 
D 4 HOH A 49 1349 51 HOH TIP . 
D 4 HOH A 50 1350 52 HOH TIP . 
D 4 HOH A 51 1351 53 HOH TIP . 
D 4 HOH A 52 1352 54 HOH TIP . 
D 4 HOH A 53 1353 55 HOH TIP . 
D 4 HOH A 54 1354 56 HOH TIP . 
D 4 HOH A 55 1355 57 HOH TIP . 
D 4 HOH A 56 1356 58 HOH TIP . 
D 4 HOH A 57 1357 59 HOH TIP . 
D 4 HOH A 58 1358 60 HOH TIP . 
D 4 HOH A 59 1359 61 HOH TIP . 
D 4 HOH A 60 1360 62 HOH TIP . 
D 4 HOH A 61 1361 63 HOH TIP . 
D 4 HOH A 62 1362 65 HOH TIP . 
D 4 HOH A 63 1363 67 HOH TIP . 
D 4 HOH A 64 1364 68 HOH TIP . 
D 4 HOH A 65 1365 70 HOH TIP . 
D 4 HOH A 66 1366 71 HOH TIP . 
D 4 HOH A 67 1367 72 HOH TIP . 
D 4 HOH A 68 1368 73 HOH TIP . 
D 4 HOH A 69 1369 74 HOH TIP . 
D 4 HOH A 70 1370 76 HOH TIP . 
D 4 HOH A 71 1371 78 HOH TIP . 
D 4 HOH A 72 1372 82 HOH TIP . 
D 4 HOH A 73 1373 83 HOH TIP . 
D 4 HOH A 74 1374 84 HOH TIP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA BLA . . . C 3 -88.976 -8.578 -87.868 1 37.23 ? CHA BLA 300 A 1 
HETATM 2 N NA BLA . . . C 3 -88.934 -10.328 -89.57 1 41.52 ? NA BLA 300 A 1 
HETATM 3 C C1A BLA . . . C 3 -88.476 -9.132 -89.074 1 40.56 ? C1A BLA 300 A 1 
HETATM 4 C C2A BLA . . . C 3 -87.637 -8.449 -90.091 1 41.76 ? C2A BLA 300 A 1 
HETATM 5 C C3A BLA . . . C 3 -87.962 -9.095 -91.268 1 43.39 ? C3A BLA 300 A 1 
HETATM 6 C C4A BLA . . . C 3 -88.689 -10.331 -90.905 1 42.44 ? C4A BLA 300 A 1 
HETATM 7 C CMA BLA . . . C 3 -87.819 -8.556 -92.699 1 42.22 ? CMA BLA 300 A 1 
HETATM 8 C CAA BLA . . . C 3 -86.439 -7.506 -89.827 1 41.03 ? CAA BLA 300 A 1 
HETATM 9 C CHB BLA . . . C 3 -89.186 -11.347 -91.764 1 43.34 ? CHB BLA 300 A 1 
HETATM 10 N NB BLA . . . C 3 -91.251 -11.83 -90.581 1 43.74 ? NB BLA 300 A 1 
HETATM 11 C C1B BLA . . . C 3 -90.349 -12.137 -91.582 1 45.05 ? C1B BLA 300 A 1 
HETATM 12 C C2B BLA . . . C 3 -90.854 -13.283 -92.429 1 45.12 ? C2B BLA 300 A 1 
HETATM 13 C C3B BLA . . . C 3 -92.017 -13.722 -91.769 1 45.89 ? C3B BLA 300 A 1 
HETATM 14 C C4B BLA . . . C 3 -92.339 -12.634 -90.83 1 45.57 ? C4B BLA 300 A 1 
HETATM 15 C CMB BLA . . . C 3 -90.456 -13.578 -93.875 1 44.57 ? CMB BLA 300 A 1 
HETATM 16 O OB BLA . . . C 3 -93.321 -12.616 -90.068 1 42.64 ? OB BLA 300 A 1 
HETATM 17 N NC BLA . . . C 3 -91.762 -12.949 -87.518 1 39.8 ? NC BLA 300 A 1 
HETATM 18 C C1C BLA . . . C 3 -91.824 -14.334 -87.657 1 39.61 ? C1C BLA 300 A 1 
HETATM 19 C C2C BLA . . . C 3 -92.953 -14.866 -86.92 1 39.88 ? C2C BLA 300 A 1 
HETATM 20 C C3C BLA . . . C 3 -93.321 -13.862 -86.051 1 39.06 ? C3C BLA 300 A 1 
HETATM 21 C C4C BLA . . . C 3 -92.482 -12.655 -86.405 1 37.35 ? C4C BLA 300 A 1 
HETATM 22 C CMC BLA . . . C 3 -93.411 -16.369 -87.013 1 37.4 ? CMC BLA 300 A 1 
HETATM 23 O OC BLA . . . C 3 -91.288 -14.946 -88.606 1 39.67 ? OC BLA 300 A 1 
HETATM 24 C CAC BLA . . . C 3 -94.397 -14.017 -85.157 1 40.31 ? CAC BLA 300 A 1 
HETATM 25 C CBC BLA . . . C 3 -94.395 -14.543 -83.834 1 42.88 ? CBC BLA 300 A 1 
HETATM 26 C CHD BLA . . . C 3 -92.219 -11.521 -85.635 1 34.99 ? CHD BLA 300 A 1 
HETATM 27 N ND BLA . . . C 3 -90.726 -10.193 -87.09 1 37.88 ? ND BLA 300 A 1 
HETATM 28 C C1D BLA . . . C 3 -91.3 -10.492 -85.872 1 35.59 ? C1D BLA 300 A 1 
HETATM 29 C C2D BLA . . . C 3 -91.044 -9.393 -84.958 1 34.27 ? C2D BLA 300 A 1 
HETATM 30 C C3D BLA . . . C 3 -90.161 -8.555 -85.597 1 35.38 ? C3D BLA 300 A 1 
HETATM 31 C C4D BLA . . . C 3 -89.822 -9.178 -86.857 1 35.71 ? C4D BLA 300 A 1 
HETATM 32 C CMD BLA . . . C 3 -91.75 -9.119 -83.615 1 30.8 ? CMD BLA 300 A 1 
HETATM 33 C CAD BLA . . . C 3 -89.383 -7.434 -84.955 1 34.06 ? CAD BLA 300 A 1 
HETATM 34 C CBD BLA . . . C 3 -88.029 -7.587 -84.24 1 33.35 ? CBD BLA 300 A 1 
HETATM 35 C CGD BLA . . . C 3 -87.549 -6.227 -83.848 1 34.89 ? CGD BLA 300 A 1 
HETATM 36 O O1D BLA . . . C 3 -87.292 -5.375 -84.721 1 36.61 ? O1D BLA 300 A 1 
HETATM 37 O O2D BLA . . . C 3 -87.81 -5.731 -82.615 1 32.75 ? O2D BLA 300 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           365 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           37 
#