data_1J2X # _model_server_result.job_id 4QjgbB0pCaCIaP5ykEDAYg _model_server_result.datetime_utc '2025-09-07 17:54:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j2x # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1000}' # _entry.id 1J2X # _exptl.entry_id 1J2X _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.38 _cell.angle_gamma 90 _cell.entry_id 1J2X _cell.length_a 59.605 _cell.length_b 30.446 _cell.length_c 47.379 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J2X _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 59 A GLU 503 1_555 E ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc2 A OE2 GLU 59 A GLU 503 1_555 E ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.253 ? metalc ? metalc3 A NE2 HIS 68 A HIS 512 4_555 E ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc4 A O GLU 73 A GLU 517 1_555 E ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? metalc ? metalc5 E ZN ZN . A ZN 1000 1_555 F O HOH . A HOH 1051 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1J2X _atom_sites.fract_transf_matrix[1][1] 0.016777 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00493 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.032845 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021999 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 998 998 SO4 SO4 . D 3 SO4 A 1 999 999 SO4 SO4 . E 4 ZN A 1 1000 1000 ZN ZN . F 5 HOH A 1 1001 1001 HOH HOH . F 5 HOH A 2 1002 1002 HOH HOH . F 5 HOH A 3 1003 1003 HOH HOH . F 5 HOH A 4 1004 1004 HOH HOH . F 5 HOH A 5 1005 1005 HOH HOH . F 5 HOH A 6 1006 1006 HOH HOH . F 5 HOH A 7 1007 1007 HOH HOH . F 5 HOH A 8 1008 1008 HOH HOH . F 5 HOH A 9 1009 1009 HOH HOH . F 5 HOH A 10 1010 1010 HOH HOH . F 5 HOH A 11 1011 1011 HOH HOH . F 5 HOH A 12 1012 1012 HOH HOH . F 5 HOH A 13 1013 1013 HOH HOH . F 5 HOH A 14 1014 1014 HOH HOH . F 5 HOH A 15 1015 1015 HOH HOH . F 5 HOH A 16 1016 1016 HOH HOH . F 5 HOH A 17 1017 1017 HOH HOH . F 5 HOH A 18 1018 1018 HOH HOH . F 5 HOH A 19 1019 1019 HOH HOH . F 5 HOH A 20 1020 1020 HOH HOH . F 5 HOH A 21 1021 1021 HOH HOH . F 5 HOH A 22 1022 1022 HOH HOH . F 5 HOH A 23 1023 1023 HOH HOH . F 5 HOH A 24 1024 1024 HOH HOH . F 5 HOH A 25 1025 1025 HOH HOH . F 5 HOH A 26 1026 1026 HOH HOH . F 5 HOH A 27 1027 1027 HOH HOH . F 5 HOH A 28 1028 1028 HOH HOH . F 5 HOH A 29 1029 1029 HOH HOH . F 5 HOH A 30 1030 1030 HOH HOH . F 5 HOH A 31 1031 1031 HOH HOH . F 5 HOH A 32 1032 1032 HOH HOH . F 5 HOH A 33 1033 1033 HOH HOH . F 5 HOH A 34 1035 1035 HOH HOH . F 5 HOH A 35 1036 1036 HOH HOH . F 5 HOH A 36 1037 1037 HOH HOH . F 5 HOH A 37 1039 1039 HOH HOH . F 5 HOH A 38 1040 1040 HOH HOH . F 5 HOH A 39 1041 1041 HOH HOH . F 5 HOH A 40 1043 1043 HOH HOH . F 5 HOH A 41 1044 1044 HOH HOH . F 5 HOH A 42 1045 1045 HOH HOH . F 5 HOH A 43 1046 1046 HOH HOH . F 5 HOH A 44 1047 1047 HOH HOH . F 5 HOH A 45 1048 1048 HOH HOH . F 5 HOH A 46 1049 1049 HOH HOH . F 5 HOH A 47 1050 1050 HOH HOH . F 5 HOH A 48 1051 1051 HOH HOH . F 5 HOH A 49 1052 1052 HOH HOH . F 5 HOH A 50 1053 1053 HOH HOH . F 5 HOH A 51 1054 1054 HOH HOH . F 5 HOH A 52 1055 1055 HOH HOH . G 5 HOH B 1 1034 1034 HOH HOH . G 5 HOH B 2 1038 1038 HOH HOH . G 5 HOH B 3 1042 1042 HOH HOH . G 5 HOH B 4 1056 1056 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 17.488 _atom_site.Cartn_y 10.946 _atom_site.Cartn_z 0.661 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 16.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1000 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #