data_1J3M # _model_server_result.job_id JwVLBXnfUH07-RTUInJvGQ _model_server_result.datetime_utc '2024-11-24 06:34:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j3m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":3016}' # _entry.id 1J3M # _exptl.entry_id 1J3M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 80.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFITE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.64 _cell.angle_gamma 90 _cell.entry_id 1J3M _cell.length_a 41.603 _cell.length_b 78.811 _cell.length_c 44.688 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J3M _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O3 S -2' _chem_comp.formula_weight 80.063 _chem_comp.id SO3 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFITE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO3 doub 269 n n S O2 SO3 sing 270 n n S O3 SO3 sing 271 n n # _atom_sites.entry_id 1J3M _atom_sites.fract_transf_matrix[1][1] 0.024037 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.012058 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025035 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO3 A 1 3016 3016 SO3 SO3 . D 3 HOH A 1 3017 1 HOH HOH . D 3 HOH A 2 3018 2 HOH HOH . D 3 HOH A 3 3019 5 HOH HOH . D 3 HOH A 4 3020 7 HOH HOH . D 3 HOH A 5 3021 8 HOH HOH . D 3 HOH A 6 3022 9 HOH HOH . D 3 HOH A 7 3023 10 HOH HOH . D 3 HOH A 8 3024 13 HOH HOH . D 3 HOH A 9 3025 14 HOH HOH . D 3 HOH A 10 3026 17 HOH HOH . D 3 HOH A 11 3027 18 HOH HOH . D 3 HOH A 12 3028 20 HOH HOH . D 3 HOH A 13 3029 21 HOH HOH . D 3 HOH A 14 3030 22 HOH HOH . D 3 HOH A 15 3031 24 HOH HOH . D 3 HOH A 16 3032 25 HOH HOH . D 3 HOH A 17 3033 28 HOH HOH . D 3 HOH A 18 3034 29 HOH HOH . D 3 HOH A 19 3035 30 HOH HOH . D 3 HOH A 20 3036 33 HOH HOH . D 3 HOH A 21 3037 34 HOH HOH . D 3 HOH A 22 3038 36 HOH HOH . D 3 HOH A 23 3039 37 HOH HOH . D 3 HOH A 24 3040 38 HOH HOH . D 3 HOH A 25 3041 39 HOH HOH . D 3 HOH A 26 3042 44 HOH HOH . D 3 HOH A 27 3043 45 HOH HOH . D 3 HOH A 28 3044 46 HOH HOH . D 3 HOH A 29 3045 47 HOH HOH . D 3 HOH A 30 3046 48 HOH HOH . D 3 HOH A 31 3047 50 HOH HOH . D 3 HOH A 32 3048 51 HOH HOH . D 3 HOH A 33 3049 52 HOH HOH . D 3 HOH A 34 3050 54 HOH HOH . D 3 HOH A 35 3051 56 HOH HOH . D 3 HOH A 36 3052 57 HOH HOH . D 3 HOH A 37 3053 58 HOH HOH . D 3 HOH A 38 3054 60 HOH HOH . D 3 HOH A 39 3055 61 HOH HOH . D 3 HOH A 40 3056 62 HOH HOH . D 3 HOH A 41 3057 64 HOH HOH . D 3 HOH A 42 3058 69 HOH HOH . D 3 HOH A 43 3059 72 HOH HOH . D 3 HOH A 44 3060 76 HOH HOH . D 3 HOH A 45 3061 78 HOH HOH . D 3 HOH A 46 3062 81 HOH HOH . D 3 HOH A 47 3063 82 HOH HOH . D 3 HOH A 48 3064 84 HOH HOH . D 3 HOH A 49 3065 86 HOH HOH . D 3 HOH A 50 3066 87 HOH HOH . D 3 HOH A 51 3067 88 HOH HOH . D 3 HOH A 52 3068 90 HOH HOH . D 3 HOH A 53 3069 94 HOH HOH . D 3 HOH A 54 3070 97 HOH HOH . D 3 HOH A 55 3071 98 HOH HOH . D 3 HOH A 56 3072 101 HOH HOH . D 3 HOH A 57 3073 102 HOH HOH . D 3 HOH A 58 3074 103 HOH HOH . D 3 HOH A 59 3075 104 HOH HOH . D 3 HOH A 60 3076 106 HOH HOH . D 3 HOH A 61 3077 108 HOH HOH . D 3 HOH A 62 3078 110 HOH HOH . E 3 HOH B 1 3 3 HOH HOH . E 3 HOH B 2 4 4 HOH HOH . E 3 HOH B 3 6 6 HOH HOH . E 3 HOH B 4 11 11 HOH HOH . E 3 HOH B 5 12 12 HOH HOH . E 3 HOH B 6 15 15 HOH HOH . E 3 HOH B 7 16 16 HOH HOH . E 3 HOH B 8 19 19 HOH HOH . E 3 HOH B 9 23 23 HOH HOH . E 3 HOH B 10 26 26 HOH HOH . E 3 HOH B 11 27 27 HOH HOH . E 3 HOH B 12 31 31 HOH HOH . E 3 HOH B 13 32 32 HOH HOH . E 3 HOH B 14 35 35 HOH HOH . E 3 HOH B 15 40 40 HOH HOH . E 3 HOH B 16 41 41 HOH HOH . E 3 HOH B 17 42 42 HOH HOH . E 3 HOH B 18 43 43 HOH HOH . E 3 HOH B 19 49 49 HOH HOH . E 3 HOH B 20 53 53 HOH HOH . E 3 HOH B 21 55 55 HOH HOH . E 3 HOH B 22 59 59 HOH HOH . E 3 HOH B 23 63 63 HOH HOH . E 3 HOH B 24 65 65 HOH HOH . E 3 HOH B 25 66 66 HOH HOH . E 3 HOH B 26 67 67 HOH HOH . E 3 HOH B 27 68 68 HOH HOH . E 3 HOH B 28 70 70 HOH HOH . E 3 HOH B 29 71 71 HOH HOH . E 3 HOH B 30 73 73 HOH HOH . E 3 HOH B 31 74 74 HOH HOH . E 3 HOH B 32 75 75 HOH HOH . E 3 HOH B 33 77 77 HOH HOH . E 3 HOH B 34 79 79 HOH HOH . E 3 HOH B 35 80 80 HOH HOH . E 3 HOH B 36 83 83 HOH HOH . E 3 HOH B 37 85 85 HOH HOH . E 3 HOH B 38 89 89 HOH HOH . E 3 HOH B 39 91 91 HOH HOH . E 3 HOH B 40 92 92 HOH HOH . E 3 HOH B 41 93 93 HOH HOH . E 3 HOH B 42 95 95 HOH HOH . E 3 HOH B 43 96 96 HOH HOH . E 3 HOH B 44 99 99 HOH HOH . E 3 HOH B 45 100 100 HOH HOH . E 3 HOH B 46 105 105 HOH HOH . E 3 HOH B 47 107 107 HOH HOH . E 3 HOH B 48 109 109 HOH HOH . E 3 HOH B 49 111 111 HOH HOH . E 3 HOH B 50 112 112 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO3 . . . C 2 13.789 -0.589 -3.345 1 31.86 ? S SO3 3016 A 1 HETATM 2 O O1 SO3 . . . C 2 12.814 -1.741 -3.306 1 32.28 ? O1 SO3 3016 A 1 HETATM 3 O O2 SO3 . . . C 2 13.038 0.645 -3.211 1 30.27 ? O2 SO3 3016 A 1 HETATM 4 O O3 SO3 . . . C 2 14.558 -0.679 -2.085 1 34.32 ? O3 SO3 3016 A 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 4 #