data_1J4R
#
_model_server_result.job_id            GNZpPan9QlEDQkGpv2TO3Q 
_model_server_result.datetime_utc      '2024-11-21 22:52:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1j4r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":109}' 
#
_entry.id    1J4R 
#
_exptl.entry_id    1J4R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1J4R 
_cell.length_a            56 
_cell.length_b            56 
_cell.length_c            78.4 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1J4R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,J 1 1 
B,F,G,K 2 1 
C,H,I,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 219 n n 
C1 C2 GOL sing 220 n n 
C1 H11 GOL sing 221 n n 
C1 H12 GOL sing 222 n n 
O1 HO1 GOL sing 223 n n 
C2 O2 GOL sing 224 n n 
C2 C3 GOL sing 225 n n 
C2 H2 GOL sing 226 n n 
O2 HO2 GOL sing 227 n n 
C3 O3 GOL sing 228 n n 
C3 H31 GOL sing 229 n n 
C3 H32 GOL sing 230 n n 
O3 HO3 GOL sing 231 n n 
#
_atom_sites.entry_id                     1J4R 
_atom_sites.fract_transf_matrix[1][1]    0.017857 
_atom_sites.fract_transf_matrix[1][2]    0.01031 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02062 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012755 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 001 A 1 108 1 001 001 . 
E 3 GOL A 1 109 3 GOL GOL . 
F 4 SO4 B 1 108 1 SO4 SO4 . 
G 2 001 B 1 109 2 001 001 . 
H 4 SO4 D 1 108 2 SO4 SO4 . 
I 2 001 D 1 109 3 001 001 . 
J 5 HOH A 1 110 6 HOH HOH . 
J 5 HOH A 2 111 8 HOH HOH . 
J 5 HOH A 3 112 12 HOH HOH . 
J 5 HOH A 4 113 14 HOH HOH . 
J 5 HOH A 5 114 16 HOH HOH . 
J 5 HOH A 6 115 20 HOH HOH . 
J 5 HOH A 7 116 22 HOH HOH . 
J 5 HOH A 8 117 24 HOH HOH . 
J 5 HOH A 9 118 26 HOH HOH . 
J 5 HOH A 10 119 30 HOH HOH . 
J 5 HOH A 11 120 31 HOH HOH . 
J 5 HOH A 12 121 32 HOH HOH . 
J 5 HOH A 13 122 35 HOH HOH . 
J 5 HOH A 14 123 46 HOH HOH . 
J 5 HOH A 15 124 48 HOH HOH . 
J 5 HOH A 16 125 51 HOH HOH . 
J 5 HOH A 17 126 52 HOH HOH . 
J 5 HOH A 18 127 57 HOH HOH . 
J 5 HOH A 19 128 59 HOH HOH . 
J 5 HOH A 20 129 63 HOH HOH . 
J 5 HOH A 21 130 64 HOH HOH . 
J 5 HOH A 22 131 65 HOH HOH . 
J 5 HOH A 23 132 69 HOH HOH . 
J 5 HOH A 24 133 70 HOH HOH . 
J 5 HOH A 25 134 73 HOH HOH . 
J 5 HOH A 26 135 82 HOH HOH . 
J 5 HOH A 27 136 84 HOH HOH . 
J 5 HOH A 28 137 85 HOH HOH . 
J 5 HOH A 29 138 86 HOH HOH . 
J 5 HOH A 30 139 87 HOH HOH . 
J 5 HOH A 31 140 90 HOH HOH . 
J 5 HOH A 32 141 95 HOH HOH . 
J 5 HOH A 33 142 99 HOH HOH . 
J 5 HOH A 34 143 102 HOH HOH . 
J 5 HOH A 35 144 106 HOH HOH . 
J 5 HOH A 36 145 110 HOH HOH . 
J 5 HOH A 37 146 120 HOH HOH . 
J 5 HOH A 38 147 121 HOH HOH . 
J 5 HOH A 39 148 122 HOH HOH . 
J 5 HOH A 40 149 125 HOH HOH . 
J 5 HOH A 41 150 132 HOH HOH . 
J 5 HOH A 42 151 133 HOH HOH . 
J 5 HOH A 43 152 135 HOH HOH . 
J 5 HOH A 44 153 138 HOH HOH . 
J 5 HOH A 45 154 139 HOH HOH . 
J 5 HOH A 46 155 141 HOH HOH . 
J 5 HOH A 47 156 143 HOH HOH . 
J 5 HOH A 48 157 146 HOH HOH . 
J 5 HOH A 49 158 148 HOH HOH . 
J 5 HOH A 50 159 149 HOH HOH . 
K 5 HOH B 1 110 5 HOH HOH . 
K 5 HOH B 2 111 9 HOH HOH . 
K 5 HOH B 3 112 10 HOH HOH . 
K 5 HOH B 4 113 11 HOH HOH . 
K 5 HOH B 5 114 13 HOH HOH . 
K 5 HOH B 6 115 15 HOH HOH . 
K 5 HOH B 7 116 18 HOH HOH . 
K 5 HOH B 8 117 19 HOH HOH . 
K 5 HOH B 9 118 21 HOH HOH . 
K 5 HOH B 10 119 23 HOH HOH . 
K 5 HOH B 11 120 25 HOH HOH . 
K 5 HOH B 12 121 28 HOH HOH . 
K 5 HOH B 13 122 29 HOH HOH . 
K 5 HOH B 14 123 33 HOH HOH . 
K 5 HOH B 15 124 38 HOH HOH . 
K 5 HOH B 16 125 41 HOH HOH . 
K 5 HOH B 17 126 42 HOH HOH . 
K 5 HOH B 18 127 43 HOH HOH . 
K 5 HOH B 19 128 47 HOH HOH . 
K 5 HOH B 20 129 54 HOH HOH . 
K 5 HOH B 21 130 56 HOH HOH . 
K 5 HOH B 22 131 58 HOH HOH . 
K 5 HOH B 23 132 62 HOH HOH . 
K 5 HOH B 24 133 66 HOH HOH . 
K 5 HOH B 25 134 67 HOH HOH . 
K 5 HOH B 26 135 68 HOH HOH . 
K 5 HOH B 27 136 72 HOH HOH . 
K 5 HOH B 28 137 74 HOH HOH . 
K 5 HOH B 29 138 75 HOH HOH . 
K 5 HOH B 30 139 78 HOH HOH . 
K 5 HOH B 31 140 79 HOH HOH . 
K 5 HOH B 32 141 80 HOH HOH . 
K 5 HOH B 33 142 89 HOH HOH . 
K 5 HOH B 34 143 92 HOH HOH . 
K 5 HOH B 35 144 93 HOH HOH . 
K 5 HOH B 36 145 98 HOH HOH . 
K 5 HOH B 37 146 103 HOH HOH . 
K 5 HOH B 38 147 104 HOH HOH . 
K 5 HOH B 39 148 108 HOH HOH . 
K 5 HOH B 40 149 112 HOH HOH . 
K 5 HOH B 41 150 115 HOH HOH . 
K 5 HOH B 42 151 117 HOH HOH . 
K 5 HOH B 43 152 119 HOH HOH . 
K 5 HOH B 44 153 123 HOH HOH . 
K 5 HOH B 45 154 124 HOH HOH . 
K 5 HOH B 46 155 126 HOH HOH . 
K 5 HOH B 47 156 129 HOH HOH . 
K 5 HOH B 48 157 130 HOH HOH . 
K 5 HOH B 49 158 136 HOH HOH . 
K 5 HOH B 50 159 137 HOH HOH . 
K 5 HOH B 51 160 140 HOH HOH . 
K 5 HOH B 52 161 144 HOH HOH . 
K 5 HOH B 53 162 145 HOH HOH . 
K 5 HOH B 54 163 147 HOH HOH . 
K 5 HOH B 55 164 150 HOH HOH . 
K 5 HOH B 56 165 151 HOH HOH . 
L 5 HOH D 1 110 4 HOH HOH . 
L 5 HOH D 2 111 7 HOH HOH . 
L 5 HOH D 3 112 17 HOH HOH . 
L 5 HOH D 4 113 27 HOH HOH . 
L 5 HOH D 5 114 34 HOH HOH . 
L 5 HOH D 6 115 36 HOH HOH . 
L 5 HOH D 7 116 37 HOH HOH . 
L 5 HOH D 8 117 39 HOH HOH . 
L 5 HOH D 9 118 40 HOH HOH . 
L 5 HOH D 10 119 44 HOH HOH . 
L 5 HOH D 11 120 45 HOH HOH . 
L 5 HOH D 12 121 49 HOH HOH . 
L 5 HOH D 13 122 50 HOH HOH . 
L 5 HOH D 14 123 53 HOH HOH . 
L 5 HOH D 15 124 55 HOH HOH . 
L 5 HOH D 16 125 60 HOH HOH . 
L 5 HOH D 17 126 61 HOH HOH . 
L 5 HOH D 18 127 71 HOH HOH . 
L 5 HOH D 19 128 76 HOH HOH . 
L 5 HOH D 20 129 77 HOH HOH . 
L 5 HOH D 21 130 81 HOH HOH . 
L 5 HOH D 22 131 83 HOH HOH . 
L 5 HOH D 23 132 88 HOH HOH . 
L 5 HOH D 24 133 91 HOH HOH . 
L 5 HOH D 25 134 94 HOH HOH . 
L 5 HOH D 26 135 96 HOH HOH . 
L 5 HOH D 27 136 97 HOH HOH . 
L 5 HOH D 28 137 100 HOH HOH . 
L 5 HOH D 29 138 101 HOH HOH . 
L 5 HOH D 30 139 105 HOH HOH . 
L 5 HOH D 31 140 107 HOH HOH . 
L 5 HOH D 32 141 109 HOH HOH . 
L 5 HOH D 33 142 111 HOH HOH . 
L 5 HOH D 34 143 113 HOH HOH . 
L 5 HOH D 35 144 114 HOH HOH . 
L 5 HOH D 36 145 116 HOH HOH . 
L 5 HOH D 37 146 118 HOH HOH . 
L 5 HOH D 38 147 127 HOH HOH . 
L 5 HOH D 39 148 128 HOH HOH . 
L 5 HOH D 40 149 131 HOH HOH . 
L 5 HOH D 41 150 134 HOH HOH . 
L 5 HOH D 42 151 142 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . E 3 31.92 -2.385 18.906 1 18.01 ? C1 GOL 109 A 1 
HETATM 2 O O1 GOL . . . E 3 30.97 -3.107 19.679 1 19.02 ? O1 GOL 109 A 1 
HETATM 3 C C2 GOL . . . E 3 33.225 -3.161 18.776 1 16.69 ? C2 GOL 109 A 1 
HETATM 4 O O2 GOL . . . E 3 33.562 -3.737 20.044 1 17.69 ? O2 GOL 109 A 1 
HETATM 5 C C3 GOL . A . E 3 34.363 -2.264 18.293 0.5 16.87 ? C3 GOL 109 A 1 
HETATM 6 C C3 GOL . B . E 3 34.339 -2.21 18.335 0.5 17.66 ? C3 GOL 109 A 1 
HETATM 7 O O3 GOL . A . E 3 34.557 -2.398 16.898 0.5 12.76 ? O3 GOL 109 A 1 
HETATM 8 O O3 GOL . B . E 3 34.423 -1.075 19.193 0.5 15.03 ? O3 GOL 109 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           229 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           8 
#