data_1J4R # _model_server_result.job_id 8PhEzr9Qt3eqWk6XF2eAmA _model_server_result.datetime_utc '2024-11-21 23:18:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j4r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":109}' # _entry.id 1J4R # _exptl.entry_id 1J4R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 624.715 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-[2,2-DIFLUORO-2-(3,4,5-TRIMETHOXY-PHENYL)-ACETYL]-PIPERIDINE-2-CARBOXYLIC ACID 4-PHENYL-1-(3-PYRIDIN-3-YL-PROPYL)-BUTYL ESTER' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1J4R _cell.length_a 56 _cell.length_b 56 _cell.length_c 78.4 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J4R _symmetry.cell_setting ? _symmetry.Int_Tables_number 145 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 32' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E,J 1 1 B,F,G,K 2 1 C,H,I,L 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 G N N ? 2 I N N # _chem_comp.formula 'C35 H42 F2 N2 O6' _chem_comp.formula_weight 624.715 _chem_comp.id 001 _chem_comp.mon_nstd_flag . _chem_comp.name '1-[2,2-DIFLUORO-2-(3,4,5-TRIMETHOXY-PHENYL)-ACETYL]-PIPERIDINE-2-CARBOXYLIC ACID 4-PHENYL-1-(3-PYRIDIN-3-YL-PROPYL)-BUTYL ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms FKB-001 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C02 001 doub 1 n y C01 C06 001 sing 2 n y C01 C10 001 sing 3 n n C02 C03 001 sing 4 n y C02 H021 001 sing 5 n n C03 C04 001 doub 6 n y C03 O03 001 sing 7 n n C04 C05 001 sing 8 n y C04 O04 001 sing 9 n n C05 C06 001 doub 10 n y C05 O05 001 sing 11 n n C06 H061 001 sing 12 n n O03 C07 001 sing 13 n n C07 H071 001 sing 14 n n C07 H072 001 sing 15 n n C07 H073 001 sing 16 n n O04 C08 001 sing 17 n n C08 H081 001 sing 18 n n C08 H082 001 sing 19 n n C08 H083 001 sing 20 n n O05 C09 001 sing 21 n n C09 H091 001 sing 22 n n C09 H092 001 sing 23 n n C09 H093 001 sing 24 n n C10 F10 001 sing 25 n n C10 F11 001 sing 26 n n C10 C11 001 sing 27 n n C11 O11 001 doub 28 n n C11 N12 001 sing 29 n n N12 C12 001 sing 30 n n N12 C16 001 sing 31 n n C12 C13 001 sing 32 n n C12 H121 001 sing 33 n n C12 H122 001 sing 34 n n C13 C14 001 sing 35 n n C13 H131 001 sing 36 n n C13 H132 001 sing 37 n n C14 C15 001 sing 38 n n C14 H141 001 sing 39 n n C14 H142 001 sing 40 n n C15 C16 001 sing 41 n n C15 H151 001 sing 42 n n C15 H152 001 sing 43 n n C16 C17 001 sing 44 n n C16 H161 001 sing 45 n n C17 O17 001 doub 46 n n C17 O18 001 sing 47 n n O18 C18 001 sing 48 n n C18 C19 001 sing 49 n n C18 C27 001 sing 50 n n C18 H181 001 sing 51 n n C19 C20 001 sing 52 n n C19 H191 001 sing 53 n n C19 H192 001 sing 54 n n C20 C21 001 sing 55 n n C20 H201 001 sing 56 n n C20 H202 001 sing 57 n n C21 C22 001 sing 58 n n C21 H211 001 sing 59 n n C21 H212 001 sing 60 n n C22 C23 001 doub 61 n y C22 C26 001 sing 62 n y C23 N23 001 sing 63 n y C23 H231 001 sing 64 n n N23 C24 001 doub 65 n y C24 C25 001 sing 66 n y C24 H241 001 sing 67 n n C25 C26 001 doub 68 n y C25 H251 001 sing 69 n n C26 H261 001 sing 70 n n C27 C28 001 sing 71 n n C27 H271 001 sing 72 n n C27 H272 001 sing 73 n n C28 C29 001 sing 74 n n C28 H281 001 sing 75 n n C28 H282 001 sing 76 n n C29 C30 001 sing 77 n n C29 H291 001 sing 78 n n C29 H292 001 sing 79 n n C30 C31 001 doub 80 n y C30 C35 001 sing 81 n y C31 C32 001 sing 82 n y C31 H311 001 sing 83 n n C32 C33 001 doub 84 n y C32 H321 001 sing 85 n n C33 C34 001 sing 86 n y C33 H331 001 sing 87 n n C34 C35 001 doub 88 n y C34 H341 001 sing 89 n n C35 H351 001 sing 90 n n # _atom_sites.entry_id 1J4R _atom_sites.fract_transf_matrix[1][1] 0.017857 _atom_sites.fract_transf_matrix[1][2] 0.01031 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02062 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012755 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 001 A 1 108 1 001 001 . E 3 GOL A 1 109 3 GOL GOL . F 4 SO4 B 1 108 1 SO4 SO4 . G 2 001 B 1 109 2 001 001 . H 4 SO4 D 1 108 2 SO4 SO4 . I 2 001 D 1 109 3 001 001 . J 5 HOH A 1 110 6 HOH HOH . J 5 HOH A 2 111 8 HOH HOH . J 5 HOH A 3 112 12 HOH HOH . J 5 HOH A 4 113 14 HOH HOH . J 5 HOH A 5 114 16 HOH HOH . J 5 HOH A 6 115 20 HOH HOH . J 5 HOH A 7 116 22 HOH HOH . J 5 HOH A 8 117 24 HOH HOH . J 5 HOH A 9 118 26 HOH HOH . J 5 HOH A 10 119 30 HOH HOH . J 5 HOH A 11 120 31 HOH HOH . J 5 HOH A 12 121 32 HOH HOH . J 5 HOH A 13 122 35 HOH HOH . J 5 HOH A 14 123 46 HOH HOH . J 5 HOH A 15 124 48 HOH HOH . J 5 HOH A 16 125 51 HOH HOH . J 5 HOH A 17 126 52 HOH HOH . J 5 HOH A 18 127 57 HOH HOH . J 5 HOH A 19 128 59 HOH HOH . J 5 HOH A 20 129 63 HOH HOH . J 5 HOH A 21 130 64 HOH HOH . J 5 HOH A 22 131 65 HOH HOH . J 5 HOH A 23 132 69 HOH HOH . J 5 HOH A 24 133 70 HOH HOH . J 5 HOH A 25 134 73 HOH HOH . J 5 HOH A 26 135 82 HOH HOH . J 5 HOH A 27 136 84 HOH HOH . J 5 HOH A 28 137 85 HOH HOH . J 5 HOH A 29 138 86 HOH HOH . J 5 HOH A 30 139 87 HOH HOH . J 5 HOH A 31 140 90 HOH HOH . J 5 HOH A 32 141 95 HOH HOH . J 5 HOH A 33 142 99 HOH HOH . J 5 HOH A 34 143 102 HOH HOH . J 5 HOH A 35 144 106 HOH HOH . J 5 HOH A 36 145 110 HOH HOH . J 5 HOH A 37 146 120 HOH HOH . J 5 HOH A 38 147 121 HOH HOH . J 5 HOH A 39 148 122 HOH HOH . J 5 HOH A 40 149 125 HOH HOH . J 5 HOH A 41 150 132 HOH HOH . J 5 HOH A 42 151 133 HOH HOH . J 5 HOH A 43 152 135 HOH HOH . J 5 HOH A 44 153 138 HOH HOH . J 5 HOH A 45 154 139 HOH HOH . J 5 HOH A 46 155 141 HOH HOH . J 5 HOH A 47 156 143 HOH HOH . J 5 HOH A 48 157 146 HOH HOH . J 5 HOH A 49 158 148 HOH HOH . J 5 HOH A 50 159 149 HOH HOH . K 5 HOH B 1 110 5 HOH HOH . K 5 HOH B 2 111 9 HOH HOH . K 5 HOH B 3 112 10 HOH HOH . K 5 HOH B 4 113 11 HOH HOH . K 5 HOH B 5 114 13 HOH HOH . K 5 HOH B 6 115 15 HOH HOH . K 5 HOH B 7 116 18 HOH HOH . K 5 HOH B 8 117 19 HOH HOH . K 5 HOH B 9 118 21 HOH HOH . K 5 HOH B 10 119 23 HOH HOH . K 5 HOH B 11 120 25 HOH HOH . K 5 HOH B 12 121 28 HOH HOH . K 5 HOH B 13 122 29 HOH HOH . K 5 HOH B 14 123 33 HOH HOH . K 5 HOH B 15 124 38 HOH HOH . K 5 HOH B 16 125 41 HOH HOH . K 5 HOH B 17 126 42 HOH HOH . K 5 HOH B 18 127 43 HOH HOH . K 5 HOH B 19 128 47 HOH HOH . K 5 HOH B 20 129 54 HOH HOH . K 5 HOH B 21 130 56 HOH HOH . K 5 HOH B 22 131 58 HOH HOH . K 5 HOH B 23 132 62 HOH HOH . K 5 HOH B 24 133 66 HOH HOH . K 5 HOH B 25 134 67 HOH HOH . K 5 HOH B 26 135 68 HOH HOH . K 5 HOH B 27 136 72 HOH HOH . K 5 HOH B 28 137 74 HOH HOH . K 5 HOH B 29 138 75 HOH HOH . K 5 HOH B 30 139 78 HOH HOH . K 5 HOH B 31 140 79 HOH HOH . K 5 HOH B 32 141 80 HOH HOH . K 5 HOH B 33 142 89 HOH HOH . K 5 HOH B 34 143 92 HOH HOH . K 5 HOH B 35 144 93 HOH HOH . K 5 HOH B 36 145 98 HOH HOH . K 5 HOH B 37 146 103 HOH HOH . K 5 HOH B 38 147 104 HOH HOH . K 5 HOH B 39 148 108 HOH HOH . K 5 HOH B 40 149 112 HOH HOH . K 5 HOH B 41 150 115 HOH HOH . K 5 HOH B 42 151 117 HOH HOH . K 5 HOH B 43 152 119 HOH HOH . K 5 HOH B 44 153 123 HOH HOH . K 5 HOH B 45 154 124 HOH HOH . K 5 HOH B 46 155 126 HOH HOH . K 5 HOH B 47 156 129 HOH HOH . K 5 HOH B 48 157 130 HOH HOH . K 5 HOH B 49 158 136 HOH HOH . K 5 HOH B 50 159 137 HOH HOH . K 5 HOH B 51 160 140 HOH HOH . K 5 HOH B 52 161 144 HOH HOH . K 5 HOH B 53 162 145 HOH HOH . K 5 HOH B 54 163 147 HOH HOH . K 5 HOH B 55 164 150 HOH HOH . K 5 HOH B 56 165 151 HOH HOH . L 5 HOH D 1 110 4 HOH HOH . L 5 HOH D 2 111 7 HOH HOH . L 5 HOH D 3 112 17 HOH HOH . L 5 HOH D 4 113 27 HOH HOH . L 5 HOH D 5 114 34 HOH HOH . L 5 HOH D 6 115 36 HOH HOH . L 5 HOH D 7 116 37 HOH HOH . L 5 HOH D 8 117 39 HOH HOH . L 5 HOH D 9 118 40 HOH HOH . L 5 HOH D 10 119 44 HOH HOH . L 5 HOH D 11 120 45 HOH HOH . L 5 HOH D 12 121 49 HOH HOH . L 5 HOH D 13 122 50 HOH HOH . L 5 HOH D 14 123 53 HOH HOH . L 5 HOH D 15 124 55 HOH HOH . L 5 HOH D 16 125 60 HOH HOH . L 5 HOH D 17 126 61 HOH HOH . L 5 HOH D 18 127 71 HOH HOH . L 5 HOH D 19 128 76 HOH HOH . L 5 HOH D 20 129 77 HOH HOH . L 5 HOH D 21 130 81 HOH HOH . L 5 HOH D 22 131 83 HOH HOH . L 5 HOH D 23 132 88 HOH HOH . L 5 HOH D 24 133 91 HOH HOH . L 5 HOH D 25 134 94 HOH HOH . L 5 HOH D 26 135 96 HOH HOH . L 5 HOH D 27 136 97 HOH HOH . L 5 HOH D 28 137 100 HOH HOH . L 5 HOH D 29 138 101 HOH HOH . L 5 HOH D 30 139 105 HOH HOH . L 5 HOH D 31 140 107 HOH HOH . L 5 HOH D 32 141 109 HOH HOH . L 5 HOH D 33 142 111 HOH HOH . L 5 HOH D 34 143 113 HOH HOH . L 5 HOH D 35 144 114 HOH HOH . L 5 HOH D 36 145 116 HOH HOH . L 5 HOH D 37 146 118 HOH HOH . L 5 HOH D 38 147 127 HOH HOH . L 5 HOH D 39 148 128 HOH HOH . L 5 HOH D 40 149 131 HOH HOH . L 5 HOH D 41 150 134 HOH HOH . L 5 HOH D 42 151 142 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 001 . . . I 2 -3.265 3.92 26.743 1 13.97 ? C01 001 109 D 1 HETATM 2 C C02 001 . . . I 2 -2.125 4.064 27.569 1 15.04 ? C02 001 109 D 1 HETATM 3 C C03 001 . . . I 2 -2.104 3.452 28.851 1 16.41 ? C03 001 109 D 1 HETATM 4 C C04 001 . . . I 2 -3.216 2.698 29.3 1 16.93 ? C04 001 109 D 1 HETATM 5 C C05 001 . . . I 2 -4.368 2.567 28.466 1 15.3 ? C05 001 109 D 1 HETATM 6 C C06 001 . . . I 2 -4.379 3.178 27.198 1 14.42 ? C06 001 109 D 1 HETATM 7 O O03 001 . . . I 2 -1.002 3.568 29.671 1 17.01 ? O03 001 109 D 1 HETATM 8 C C07 001 . . . I 2 -0.17 4.722 29.558 1 17.2 ? C07 001 109 D 1 HETATM 9 O O04 001 . . . I 2 -3.104 2.034 30.52 1 19.02 ? O04 001 109 D 1 HETATM 10 C C08 001 . . . I 2 -4.268 1.596 31.233 1 21.66 ? C08 001 109 D 1 HETATM 11 O O05 001 . . . I 2 -5.465 1.854 28.875 1 13.95 ? O05 001 109 D 1 HETATM 12 C C09 001 . . . I 2 -6.25 1.176 27.896 1 14.73 ? C09 001 109 D 1 HETATM 13 C C10 001 . . . I 2 -3.338 4.531 25.39 1 12.57 ? C10 001 109 D 1 HETATM 14 F F10 001 . . . I 2 -2.113 4.949 25.018 1 10.92 ? F10 001 109 D 1 HETATM 15 F F11 001 . . . I 2 -4.129 5.622 25.501 1 14.05 ? F11 001 109 D 1 HETATM 16 C C11 001 . . . I 2 -3.922 3.658 24.317 1 10.38 ? C11 001 109 D 1 HETATM 17 O O11 001 . . . I 2 -5.071 3.858 23.941 1 9.49 ? O11 001 109 D 1 HETATM 18 N N12 001 . . . I 2 -3.227 2.644 23.781 1 9.24 ? N12 001 109 D 1 HETATM 19 C C12 001 . . . I 2 -1.852 2.289 24.176 1 9.27 ? C12 001 109 D 1 HETATM 20 C C13 001 . . . I 2 -0.906 2.273 22.967 1 9.12 ? C13 001 109 D 1 HETATM 21 C C14 001 . . . I 2 -1.447 1.324 21.885 1 8.65 ? C14 001 109 D 1 HETATM 22 C C15 001 . . . I 2 -2.878 1.691 21.478 1 9.38 ? C15 001 109 D 1 HETATM 23 C C16 001 . . . I 2 -3.807 1.797 22.699 1 9.48 ? C16 001 109 D 1 HETATM 24 C C17 001 . . . I 2 -4.094 0.439 23.263 1 9.64 ? C17 001 109 D 1 HETATM 25 O O17 001 . . . I 2 -4.429 -0.478 22.531 1 8.51 ? O17 001 109 D 1 HETATM 26 O O18 001 . . . I 2 -3.989 0.256 24.585 1 10.92 ? O18 001 109 D 1 HETATM 27 C C18 001 . . . I 2 -4.197 -1.052 25.141 1 12.64 ? C18 001 109 D 1 HETATM 28 C C19 001 . . . I 2 -5.694 -1.421 25.055 1 13.09 ? C19 001 109 D 1 HETATM 29 C C20 001 . . . I 2 -6.012 -2.639 25.933 1 13.16 ? C20 001 109 D 1 HETATM 30 C C21 001 . . . I 2 -7.503 -2.965 25.845 1 13.35 ? C21 001 109 D 1 HETATM 31 C C22 001 . . . I 2 -7.834 -3.638 24.521 1 13.38 ? C22 001 109 D 1 HETATM 32 C C23 001 . . . I 2 -7.256 -4.866 24.158 1 14.4 ? C23 001 109 D 1 HETATM 33 N N23 001 . . . I 2 -7.588 -5.461 22.982 1 14.91 ? N23 001 109 D 1 HETATM 34 C C24 001 . . . I 2 -8.47 -4.901 22.124 1 13.11 ? C24 001 109 D 1 HETATM 35 C C25 001 . . . I 2 -9.068 -3.68 22.435 1 12.77 ? C25 001 109 D 1 HETATM 36 C C26 001 . . . I 2 -8.748 -3.046 23.642 1 13.56 ? C26 001 109 D 1 HETATM 37 C C27 001 . . . I 2 -3.745 -1.034 26.598 1 14.17 ? C27 001 109 D 1 HETATM 38 C C28 001 . . . I 2 -2.241 -0.848 26.672 1 14.85 ? C28 001 109 D 1 HETATM 39 C C29 001 . . . I 2 -1.87 -0.504 28.12 1 17.13 ? C29 001 109 D 1 HETATM 40 C C30 001 . . . I 2 -0.493 0.107 28.196 1 16.93 ? C30 001 109 D 1 HETATM 41 C C31 001 . . . I 2 -0.044 0.975 27.192 1 17.85 ? C31 001 109 D 1 HETATM 42 C C32 001 . . . I 2 1.23 1.537 27.273 1 17.58 ? C32 001 109 D 1 HETATM 43 C C33 001 . . . I 2 2.061 1.231 28.358 1 17.37 ? C33 001 109 D 1 HETATM 44 C C34 001 . . . I 2 1.607 0.368 29.348 1 17.24 ? C34 001 109 D 1 HETATM 45 C C35 001 . . . I 2 0.328 -0.192 29.266 1 17.25 ? C35 001 109 D 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 45 #