data_1J55 # _model_server_result.job_id D-xbclV5zTW7sT0Pkvcs5Q _model_server_result.datetime_utc '2024-10-18 17:21:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j55 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":102}' # _entry.id 1J55 # _exptl.entry_id 1J55 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1J55 _cell.length_a 60.827 _cell.length_b 60.827 _cell.length_c 47.61 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J55 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 60.827 60.827 23.805 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O SER 19 A SER 19 1_555 B CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? metalc ? metalc2 A O GLU 22 A GLU 22 1_555 B CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? metalc ? metalc3 A O SER 24 A SER 24 1_555 B CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc4 A O THR 27 A THR 27 1_555 B CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc5 A OE2 GLU 32 A GLU 32 1_555 B CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.703 ? metalc ? metalc6 A OE1 GLU 32 A GLU 32 1_555 B CA CA . A CA 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc7 A OD1 ASP 62 A ASP 62 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc8 A OD1 ASN 64 A ASN 64 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.287 ? metalc ? metalc9 A OD1 ASP 66 A ASP 66 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.342 ? metalc ? metalc10 A O GLN 68 A GLN 68 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc11 A OE1 GLU 73 A GLU 73 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.644 ? metalc ? metalc12 A OE2 GLU 73 A GLU 73 1_555 C CA CA . A CA 102 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.5 ? metalc ? metalc13 B CA CA . A CA 101 1_555 D O HOH . A HOH 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc14 C CA CA . A CA 102 1_555 D O HOH . A HOH 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.482 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1J55 _atom_sites.fract_transf_matrix[1][1] 0.01644 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01644 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021004 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 101 101 CA CA . C 2 CA A 1 102 102 CA CA . D 3 HOH A 1 103 1 HOH TIP . D 3 HOH A 2 104 2 HOH TIP . D 3 HOH A 3 105 3 HOH TIP . D 3 HOH A 4 106 4 HOH TIP . D 3 HOH A 5 107 5 HOH TIP . D 3 HOH A 6 108 6 HOH TIP . D 3 HOH A 7 109 7 HOH TIP . D 3 HOH A 8 110 8 HOH TIP . D 3 HOH A 9 111 9 HOH TIP . D 3 HOH A 10 112 10 HOH TIP . D 3 HOH A 11 113 11 HOH TIP . D 3 HOH A 12 114 12 HOH TIP . D 3 HOH A 13 115 13 HOH TIP . D 3 HOH A 14 116 14 HOH TIP . D 3 HOH A 15 117 15 HOH TIP . D 3 HOH A 16 118 16 HOH TIP . D 3 HOH A 17 119 17 HOH TIP . D 3 HOH A 18 120 18 HOH TIP . D 3 HOH A 19 121 19 HOH TIP . D 3 HOH A 20 122 20 HOH TIP . D 3 HOH A 21 123 21 HOH TIP . D 3 HOH A 22 124 22 HOH TIP . D 3 HOH A 23 125 23 HOH TIP . D 3 HOH A 24 126 24 HOH TIP . D 3 HOH A 25 127 25 HOH TIP . D 3 HOH A 26 128 26 HOH TIP . D 3 HOH A 27 129 27 HOH TIP . D 3 HOH A 28 130 28 HOH TIP . D 3 HOH A 29 131 29 HOH TIP . D 3 HOH A 30 132 30 HOH TIP . D 3 HOH A 31 133 31 HOH TIP . D 3 HOH A 32 134 32 HOH TIP . D 3 HOH A 33 135 33 HOH TIP . D 3 HOH A 34 136 34 HOH TIP . D 3 HOH A 35 137 35 HOH TIP . D 3 HOH A 36 138 36 HOH TIP . D 3 HOH A 37 139 37 HOH TIP . D 3 HOH A 38 140 38 HOH TIP . D 3 HOH A 39 141 39 HOH TIP . D 3 HOH A 40 142 40 HOH TIP . D 3 HOH A 41 143 41 HOH TIP . D 3 HOH A 42 144 42 HOH TIP . D 3 HOH A 43 145 43 HOH TIP . D 3 HOH A 44 146 44 HOH TIP . D 3 HOH A 45 147 45 HOH TIP . D 3 HOH A 46 148 46 HOH TIP . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 8.152 _atom_site.Cartn_y 33.315 _atom_site.Cartn_z 6.282 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 102 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #