data_1J7Z # _model_server_result.job_id 9frYPCLFzKqXWnH0SGWISg _model_server_result.datetime_utc '2024-12-21 16:06:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j7z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":125}' # _entry.id 1J7Z # _exptl.entry_id 1J7Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1J7Z _cell.length_a 44.59 _cell.length_b 44.59 _cell.length_c 98 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J7Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA tetrameric 4 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,B,C,D,E 2 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 6 B CYS 26 1_555 B SG CYS 64 B CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 B SG CYS 20 B CYS 40 1_555 B SG CYS 75 B CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf3 B SG CYS 38 B CYS 58 1_555 B SG CYS 90 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 B SG CYS 45 B CYS 65 1_555 B SG CYS 52 B CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? covale ? covale1 A C SER 15 A SER 15 1_555 A N NH2 16 A NH2 16 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 292 n n S O2 SO4 doub 293 n n S O3 SO4 sing 294 n n S O4 SO4 sing 295 n n # _atom_sites.entry_id 1J7Z _atom_sites.fract_transf_matrix[1][1] 0.022427 _atom_sites.fract_transf_matrix[1][2] 0.012948 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025896 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010204 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 B 1 125 125 SO4 SO4 . D 4 HOH A 1 202 202 HOH WAT . D 4 HOH A 2 218 218 HOH WAT . D 4 HOH A 3 223 223 HOH WAT . D 4 HOH A 4 227 227 HOH WAT . D 4 HOH A 5 234 234 HOH WAT . D 4 HOH A 6 245 245 HOH WAT . D 4 HOH A 7 247 247 HOH WAT . E 4 HOH B 1 201 201 HOH WAT . E 4 HOH B 2 203 203 HOH WAT . E 4 HOH B 3 205 205 HOH WAT . E 4 HOH B 4 206 206 HOH WAT . E 4 HOH B 5 207 207 HOH WAT . E 4 HOH B 6 208 208 HOH WAT . E 4 HOH B 7 209 209 HOH WAT . E 4 HOH B 8 210 210 HOH WAT . E 4 HOH B 9 211 211 HOH WAT . E 4 HOH B 10 212 212 HOH WAT . E 4 HOH B 11 213 213 HOH WAT . E 4 HOH B 12 214 214 HOH WAT . E 4 HOH B 13 215 215 HOH WAT . E 4 HOH B 14 216 216 HOH WAT . E 4 HOH B 15 217 217 HOH WAT . E 4 HOH B 16 220 220 HOH WAT . E 4 HOH B 17 221 221 HOH WAT . E 4 HOH B 18 222 222 HOH WAT . E 4 HOH B 19 224 224 HOH WAT . E 4 HOH B 20 226 226 HOH WAT . E 4 HOH B 21 228 228 HOH WAT . E 4 HOH B 22 231 231 HOH WAT . E 4 HOH B 23 232 232 HOH WAT . E 4 HOH B 24 236 236 HOH WAT . E 4 HOH B 25 237 237 HOH WAT . E 4 HOH B 26 238 238 HOH WAT . E 4 HOH B 27 239 239 HOH WAT . E 4 HOH B 28 240 240 HOH WAT . E 4 HOH B 29 241 241 HOH WAT . E 4 HOH B 30 243 243 HOH WAT . E 4 HOH B 31 246 246 HOH WAT . E 4 HOH B 32 248 248 HOH WAT . E 4 HOH B 33 249 249 HOH WAT . E 4 HOH B 34 250 250 HOH WAT . E 4 HOH B 35 252 252 HOH WAT . E 4 HOH B 36 256 256 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -9.406 -3.674 8.092 1 42.92 ? S SO4 125 B 1 HETATM 2 O O1 SO4 . . . C 3 -10.261 -3.501 6.969 1 86.16 ? O1 SO4 125 B 1 HETATM 3 O O2 SO4 . . . C 3 -9.151 -2.435 8.779 1 96.15 ? O2 SO4 125 B 1 HETATM 4 O O3 SO4 . . . C 3 -8.114 -4.123 7.684 1 0.87 ? O3 SO4 125 B 1 HETATM 5 O O4 SO4 . . . C 3 -9.997 -4.591 9.028 1 69.29 ? O4 SO4 125 B 1 # _model_server_stats.io_time_ms 56 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 249 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #