data_1J99 # _model_server_result.job_id b6ywCedrKdaAyRDZWoqSFA _model_server_result.datetime_utc '2024-12-02 16:12:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j99 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 1J99 # _exptl.entry_id 1J99 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 454.399 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) IODIDE' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1J99 _cell.length_a 77.931 _cell.length_b 137.976 _cell.length_c 45.864 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J99 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 63 A CYS 55 1_555 C HG HGI . A HGI 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc2 A SG CYS 162 A CYS 154 1_555 D HG HGI . A HGI 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc3 A SG CYS 207 A CYS 199 1_555 E HG HGI . A HGI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc4 A NE2 GLN 208 A GLN 200 1_555 E HG HGI . A HGI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.176 ? metalc ? metalc5 A O LYS 212 A LYS 204 1_555 E HG HGI . A HGI 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.562 ? # _chem_comp.formula 'Hg I2' _chem_comp.formula_weight 454.399 _chem_comp.id HGI _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) IODIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MERCURY DIIODIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag HG I1 HGI sing 181 n n HG I2 HGI sing 182 n n # _atom_sites.entry_id 1J99 _atom_sites.fract_transf_matrix[1][1] 0.012832 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007248 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 300 300 IOD IOD . C 3 HGI A 1 301 301 HGI HGI . D 3 HGI A 1 302 302 HGI HGI . E 3 HGI A 1 303 303 HGI HGI . F 4 AND A 1 401 401 AND AND . G 5 HOH A 1 402 1 HOH HOH . G 5 HOH A 2 403 2 HOH HOH . G 5 HOH A 3 404 3 HOH HOH . G 5 HOH A 4 405 4 HOH HOH . G 5 HOH A 5 406 5 HOH HOH . G 5 HOH A 6 407 6 HOH HOH . G 5 HOH A 7 408 7 HOH HOH . G 5 HOH A 8 409 8 HOH HOH . G 5 HOH A 9 410 9 HOH HOH . G 5 HOH A 10 411 10 HOH HOH . G 5 HOH A 11 412 11 HOH HOH . G 5 HOH A 12 413 12 HOH HOH . G 5 HOH A 13 414 13 HOH HOH . G 5 HOH A 14 415 14 HOH HOH . G 5 HOH A 15 416 15 HOH HOH . G 5 HOH A 16 417 16 HOH HOH . G 5 HOH A 17 418 17 HOH HOH . G 5 HOH A 18 419 18 HOH HOH . G 5 HOH A 19 420 19 HOH HOH . G 5 HOH A 20 421 20 HOH HOH . G 5 HOH A 21 422 21 HOH HOH . G 5 HOH A 22 423 22 HOH HOH . G 5 HOH A 23 424 23 HOH HOH . G 5 HOH A 24 425 24 HOH HOH . G 5 HOH A 25 426 25 HOH HOH . G 5 HOH A 26 427 26 HOH HOH . G 5 HOH A 27 428 28 HOH HOH . G 5 HOH A 28 429 29 HOH HOH . G 5 HOH A 29 430 30 HOH HOH . G 5 HOH A 30 431 31 HOH HOH . G 5 HOH A 31 432 32 HOH HOH . G 5 HOH A 32 433 33 HOH HOH . G 5 HOH A 33 434 34 HOH HOH . G 5 HOH A 34 435 35 HOH HOH . G 5 HOH A 35 436 36 HOH HOH . G 5 HOH A 36 437 37 HOH HOH . G 5 HOH A 37 438 38 HOH HOH . G 5 HOH A 38 439 39 HOH HOH . G 5 HOH A 39 440 40 HOH HOH . G 5 HOH A 40 441 41 HOH HOH . G 5 HOH A 41 442 42 HOH HOH . G 5 HOH A 42 443 43 HOH HOH . G 5 HOH A 43 444 44 HOH HOH . G 5 HOH A 44 445 45 HOH HOH . G 5 HOH A 45 446 46 HOH HOH . G 5 HOH A 46 447 47 HOH HOH . G 5 HOH A 47 448 48 HOH HOH . G 5 HOH A 48 449 49 HOH HOH . G 5 HOH A 49 450 50 HOH HOH . G 5 HOH A 50 451 51 HOH HOH . G 5 HOH A 51 452 52 HOH HOH . G 5 HOH A 52 453 53 HOH HOH . G 5 HOH A 53 454 54 HOH HOH . G 5 HOH A 54 455 55 HOH HOH . G 5 HOH A 55 456 56 HOH HOH . G 5 HOH A 56 457 57 HOH HOH . G 5 HOH A 57 458 58 HOH HOH . G 5 HOH A 58 459 59 HOH HOH . G 5 HOH A 59 460 60 HOH HOH . G 5 HOH A 60 461 61 HOH HOH . G 5 HOH A 61 462 62 HOH HOH . G 5 HOH A 62 463 63 HOH HOH . G 5 HOH A 63 464 64 HOH HOH . G 5 HOH A 64 465 65 HOH HOH . G 5 HOH A 65 466 66 HOH HOH . G 5 HOH A 66 467 67 HOH HOH . G 5 HOH A 67 468 68 HOH HOH . G 5 HOH A 68 469 69 HOH HOH . G 5 HOH A 69 470 70 HOH HOH . G 5 HOH A 70 471 71 HOH HOH . G 5 HOH A 71 472 72 HOH HOH . G 5 HOH A 72 473 73 HOH HOH . G 5 HOH A 73 474 74 HOH HOH . G 5 HOH A 74 475 75 HOH HOH . G 5 HOH A 75 476 76 HOH HOH . G 5 HOH A 76 477 77 HOH HOH . G 5 HOH A 77 478 78 HOH HOH . G 5 HOH A 78 479 79 HOH HOH . G 5 HOH A 79 480 80 HOH HOH . G 5 HOH A 80 481 81 HOH HOH . G 5 HOH A 81 482 82 HOH HOH . G 5 HOH A 82 483 83 HOH HOH . G 5 HOH A 83 484 84 HOH HOH . G 5 HOH A 84 485 85 HOH HOH . G 5 HOH A 85 486 86 HOH HOH . G 5 HOH A 86 487 87 HOH HOH . G 5 HOH A 87 488 88 HOH HOH . G 5 HOH A 88 489 90 HOH HOH . G 5 HOH A 89 490 91 HOH HOH . G 5 HOH A 90 491 92 HOH HOH . G 5 HOH A 91 492 93 HOH HOH . G 5 HOH A 92 493 94 HOH HOH . G 5 HOH A 93 494 95 HOH HOH . G 5 HOH A 94 495 96 HOH HOH . G 5 HOH A 95 496 97 HOH HOH . G 5 HOH A 96 497 98 HOH HOH . G 5 HOH A 97 498 99 HOH HOH . G 5 HOH A 98 499 100 HOH HOH . G 5 HOH A 99 500 101 HOH HOH . G 5 HOH A 100 501 102 HOH HOH . G 5 HOH A 101 502 103 HOH HOH . G 5 HOH A 102 503 104 HOH HOH . G 5 HOH A 103 504 105 HOH HOH . G 5 HOH A 104 505 106 HOH HOH . G 5 HOH A 105 506 107 HOH HOH . G 5 HOH A 106 507 108 HOH HOH . G 5 HOH A 107 508 109 HOH HOH . G 5 HOH A 108 509 110 HOH HOH . G 5 HOH A 109 510 111 HOH HOH . G 5 HOH A 110 511 112 HOH HOH . G 5 HOH A 111 512 113 HOH HOH . G 5 HOH A 112 513 114 HOH HOH . G 5 HOH A 113 514 115 HOH HOH . G 5 HOH A 114 515 116 HOH HOH . G 5 HOH A 115 516 117 HOH HOH . G 5 HOH A 116 517 118 HOH HOH . G 5 HOH A 117 518 119 HOH HOH . G 5 HOH A 118 519 120 HOH HOH . G 5 HOH A 119 520 121 HOH HOH . G 5 HOH A 120 521 122 HOH HOH . G 5 HOH A 121 522 123 HOH HOH . G 5 HOH A 122 523 125 HOH HOH . G 5 HOH A 123 524 126 HOH HOH . G 5 HOH A 124 525 127 HOH HOH . G 5 HOH A 125 526 128 HOH HOH . G 5 HOH A 126 527 129 HOH HOH . G 5 HOH A 127 528 131 HOH HOH . G 5 HOH A 128 529 133 HOH HOH . G 5 HOH A 129 530 134 HOH HOH . G 5 HOH A 130 531 135 HOH HOH . G 5 HOH A 131 532 136 HOH HOH . G 5 HOH A 132 533 137 HOH HOH . G 5 HOH A 133 534 138 HOH HOH . G 5 HOH A 134 535 140 HOH HOH . G 5 HOH A 135 536 141 HOH HOH . G 5 HOH A 136 537 142 HOH HOH . G 5 HOH A 137 538 143 HOH HOH . G 5 HOH A 138 539 144 HOH HOH . G 5 HOH A 139 540 145 HOH HOH . G 5 HOH A 140 541 148 HOH HOH . G 5 HOH A 141 542 149 HOH HOH . G 5 HOH A 142 543 151 HOH HOH . G 5 HOH A 143 544 152 HOH HOH . G 5 HOH A 144 545 153 HOH HOH . G 5 HOH A 145 546 154 HOH HOH . G 5 HOH A 146 547 155 HOH HOH . G 5 HOH A 147 548 156 HOH HOH . G 5 HOH A 148 549 158 HOH HOH . G 5 HOH A 149 550 159 HOH HOH . G 5 HOH A 150 551 160 HOH HOH . G 5 HOH A 151 552 161 HOH HOH . G 5 HOH A 152 553 162 HOH HOH . G 5 HOH A 153 554 164 HOH HOH . G 5 HOH A 154 555 165 HOH HOH . G 5 HOH A 155 556 166 HOH HOH . G 5 HOH A 156 557 167 HOH HOH . G 5 HOH A 157 558 169 HOH HOH . G 5 HOH A 158 559 170 HOH HOH . G 5 HOH A 159 560 171 HOH HOH . G 5 HOH A 160 561 172 HOH HOH . G 5 HOH A 161 562 173 HOH HOH . G 5 HOH A 162 563 174 HOH HOH . G 5 HOH A 163 564 175 HOH HOH . G 5 HOH A 164 565 176 HOH HOH . G 5 HOH A 165 566 177 HOH HOH . G 5 HOH A 166 567 179 HOH HOH . G 5 HOH A 167 568 180 HOH HOH . G 5 HOH A 168 569 182 HOH HOH . G 5 HOH A 169 570 183 HOH HOH . G 5 HOH A 170 571 184 HOH HOH . G 5 HOH A 171 572 185 HOH HOH . G 5 HOH A 172 573 186 HOH HOH . G 5 HOH A 173 574 187 HOH HOH . G 5 HOH A 174 575 188 HOH HOH . G 5 HOH A 175 576 189 HOH HOH . G 5 HOH A 176 577 190 HOH HOH . G 5 HOH A 177 578 196 HOH HOH . G 5 HOH A 178 579 197 HOH HOH . G 5 HOH A 179 580 198 HOH HOH . G 5 HOH A 180 581 201 HOH HOH . G 5 HOH A 181 582 204 HOH HOH . G 5 HOH A 182 583 205 HOH HOH . G 5 HOH A 183 584 208 HOH HOH . G 5 HOH A 184 585 210 HOH HOH . G 5 HOH A 185 586 211 HOH HOH . G 5 HOH A 186 587 214 HOH HOH . G 5 HOH A 187 588 215 HOH HOH . G 5 HOH A 188 589 216 HOH HOH . G 5 HOH A 189 590 217 HOH HOH . G 5 HOH A 190 591 218 HOH HOH . G 5 HOH A 191 592 221 HOH HOH . G 5 HOH A 192 593 222 HOH HOH . G 5 HOH A 193 594 223 HOH HOH . G 5 HOH A 194 595 226 HOH HOH . G 5 HOH A 195 596 227 HOH HOH . G 5 HOH A 196 597 230 HOH HOH . G 5 HOH A 197 598 232 HOH HOH . G 5 HOH A 198 599 234 HOH HOH . G 5 HOH A 199 600 238 HOH HOH . G 5 HOH A 200 601 239 HOH HOH . G 5 HOH A 201 602 240 HOH HOH . G 5 HOH A 202 603 243 HOH HOH . G 5 HOH A 203 604 244 HOH HOH . G 5 HOH A 204 605 245 HOH HOH . G 5 HOH A 205 606 246 HOH HOH . G 5 HOH A 206 607 247 HOH HOH . G 5 HOH A 207 608 248 HOH HOH . G 5 HOH A 208 609 250 HOH HOH . G 5 HOH A 209 610 251 HOH HOH . G 5 HOH A 210 611 252 HOH HOH . G 5 HOH A 211 612 253 HOH HOH . G 5 HOH A 212 613 254 HOH HOH . G 5 HOH A 213 614 256 HOH HOH . G 5 HOH A 214 615 257 HOH HOH . G 5 HOH A 215 616 258 HOH HOH . G 5 HOH A 216 617 259 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 HG HG HGI . . . C 3 4.094 -27.598 34.69 1 91.38 ? HG HGI 301 A 1 HETATM 2 I I1 HGI . . . C 3 6.239 -27.907 36.021 1 80.33 ? I1 HGI 301 A 1 HETATM 3 I I2 HGI . . . C 3 4.437 -26.429 32.307 1 76.25 ? I2 HGI 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 3 #