data_1J9G # _model_server_result.job_id jgiS67xLcTq3vyLToj2ZeA _model_server_result.datetime_utc '2024-12-25 13:21:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j9g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":149}' # _entry.id 1J9G # _exptl.entry_id 1J9G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1J9G _cell.length_a 55.48 _cell.length_b 55.48 _cell.length_c 126.72 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J9G _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 83 n n N1 C10 FMN doub 84 n n C2 O2 FMN doub 85 n n C2 N3 FMN sing 86 n n N3 C4 FMN sing 87 n n N3 HN3 FMN sing 88 n n C4 O4 FMN doub 89 n n C4 C4A FMN sing 90 n n C4A N5 FMN doub 91 n n C4A C10 FMN sing 92 n n N5 C5A FMN sing 93 n n C5A C6 FMN doub 94 n y C5A C9A FMN sing 95 n y C6 C7 FMN sing 96 n y C6 H6 FMN sing 97 n n C7 C7M FMN sing 98 n n C7 C8 FMN doub 99 n y C7M HM71 FMN sing 100 n n C7M HM72 FMN sing 101 n n C7M HM73 FMN sing 102 n n C8 C8M FMN sing 103 n n C8 C9 FMN sing 104 n y C8M HM81 FMN sing 105 n n C8M HM82 FMN sing 106 n n C8M HM83 FMN sing 107 n n C9 C9A FMN doub 108 n y C9 H9 FMN sing 109 n n C9A N10 FMN sing 110 n n N10 C10 FMN sing 111 n n N10 C1' FMN sing 112 n n C1' C2' FMN sing 113 n n C1' "H1'1" FMN sing 114 n n C1' "H1'2" FMN sing 115 n n C2' O2' FMN sing 116 n n C2' C3' FMN sing 117 n n C2' H2' FMN sing 118 n n O2' HO2' FMN sing 119 n n C3' O3' FMN sing 120 n n C3' C4' FMN sing 121 n n C3' H3' FMN sing 122 n n O3' HO3' FMN sing 123 n n C4' O4' FMN sing 124 n n C4' C5' FMN sing 125 n n C4' H4' FMN sing 126 n n O4' HO4' FMN sing 127 n n C5' O5' FMN sing 128 n n C5' "H5'1" FMN sing 129 n n C5' "H5'2" FMN sing 130 n n O5' P FMN sing 131 n n P O1P FMN doub 132 n n P O2P FMN sing 133 n n P O3P FMN sing 134 n n O2P HOP2 FMN sing 135 n n O3P HOP3 FMN sing 136 n n # _atom_sites.entry_id 1J9G _atom_sites.fract_transf_matrix[1][1] 0.018025 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018025 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMN A 1 149 149 FMN FMN . C 3 HOH A 1 3001 3001 HOH HOH . C 3 HOH A 2 3002 3002 HOH HOH . C 3 HOH A 3 3003 3003 HOH HOH . C 3 HOH A 4 3004 3004 HOH HOH . C 3 HOH A 5 3005 3005 HOH HOH . C 3 HOH A 6 3006 3006 HOH HOH . C 3 HOH A 7 3007 3007 HOH HOH . C 3 HOH A 8 3008 3008 HOH HOH . C 3 HOH A 9 3009 3009 HOH HOH . C 3 HOH A 10 3010 3010 HOH HOH . C 3 HOH A 11 3011 3011 HOH HOH . C 3 HOH A 12 3012 3012 HOH HOH . C 3 HOH A 13 3013 3013 HOH HOH . C 3 HOH A 14 3014 3014 HOH HOH . C 3 HOH A 15 3015 3015 HOH HOH . C 3 HOH A 16 3016 3016 HOH HOH . C 3 HOH A 17 3017 3017 HOH HOH . C 3 HOH A 18 3018 3018 HOH HOH . C 3 HOH A 19 3019 3019 HOH HOH . C 3 HOH A 20 3020 3020 HOH HOH . C 3 HOH A 21 3021 3021 HOH HOH . C 3 HOH A 22 3022 3022 HOH HOH . C 3 HOH A 23 3023 3023 HOH HOH . C 3 HOH A 24 3024 3024 HOH HOH . C 3 HOH A 25 3025 3025 HOH HOH . C 3 HOH A 26 3026 3026 HOH HOH . C 3 HOH A 27 3027 3027 HOH HOH . C 3 HOH A 28 3028 3028 HOH HOH . C 3 HOH A 29 3029 3029 HOH HOH . C 3 HOH A 30 3030 3030 HOH HOH . C 3 HOH A 31 3031 3031 HOH HOH . C 3 HOH A 32 3032 3032 HOH HOH . C 3 HOH A 33 3033 3033 HOH HOH . C 3 HOH A 34 3034 3034 HOH HOH . C 3 HOH A 35 3035 3035 HOH HOH . C 3 HOH A 36 3036 3036 HOH HOH . C 3 HOH A 37 3037 3037 HOH HOH . C 3 HOH A 38 3038 3038 HOH HOH . C 3 HOH A 39 3039 3039 HOH HOH . C 3 HOH A 40 3040 3040 HOH HOH . C 3 HOH A 41 3041 3041 HOH HOH . C 3 HOH A 42 3042 3042 HOH HOH . C 3 HOH A 43 3043 3043 HOH HOH . C 3 HOH A 44 3044 3044 HOH HOH . C 3 HOH A 45 3045 3045 HOH HOH . C 3 HOH A 46 3046 3046 HOH HOH . C 3 HOH A 47 3047 3047 HOH HOH . C 3 HOH A 48 3048 3048 HOH HOH . C 3 HOH A 49 3049 3049 HOH HOH . C 3 HOH A 50 3050 3050 HOH HOH . C 3 HOH A 51 3051 3051 HOH HOH . C 3 HOH A 52 3052 3052 HOH HOH . C 3 HOH A 53 3053 3053 HOH HOH . C 3 HOH A 54 3054 3054 HOH HOH . C 3 HOH A 55 3055 3055 HOH HOH . C 3 HOH A 56 3056 3056 HOH HOH . C 3 HOH A 57 3057 3057 HOH HOH . C 3 HOH A 58 3058 3058 HOH HOH . C 3 HOH A 59 3059 3059 HOH HOH . C 3 HOH A 60 3060 3060 HOH HOH . C 3 HOH A 61 3061 3061 HOH HOH . C 3 HOH A 62 3062 3062 HOH HOH . C 3 HOH A 63 3063 3063 HOH HOH . C 3 HOH A 64 3064 3064 HOH HOH . C 3 HOH A 65 3065 3065 HOH HOH . C 3 HOH A 66 3066 3066 HOH HOH . C 3 HOH A 67 3067 3067 HOH HOH . C 3 HOH A 68 3068 3068 HOH HOH . C 3 HOH A 69 3069 3069 HOH HOH . C 3 HOH A 70 3070 3070 HOH HOH . C 3 HOH A 71 3071 3071 HOH HOH . C 3 HOH A 72 3072 3072 HOH HOH . C 3 HOH A 73 3073 3073 HOH HOH . C 3 HOH A 74 3074 3074 HOH HOH . C 3 HOH A 75 3075 3075 HOH HOH . C 3 HOH A 76 3076 3076 HOH HOH . C 3 HOH A 77 3077 3077 HOH HOH . C 3 HOH A 78 3078 3078 HOH HOH . C 3 HOH A 79 3079 3079 HOH HOH . C 3 HOH A 80 3080 3080 HOH HOH . C 3 HOH A 81 3081 3081 HOH HOH . C 3 HOH A 82 3082 3082 HOH HOH . C 3 HOH A 83 3083 3083 HOH HOH . C 3 HOH A 84 3084 3084 HOH HOH . C 3 HOH A 85 3085 3085 HOH HOH . C 3 HOH A 86 3086 3086 HOH HOH . C 3 HOH A 87 3087 3087 HOH HOH . C 3 HOH A 88 3088 3088 HOH HOH . C 3 HOH A 89 3089 3089 HOH HOH . C 3 HOH A 90 3090 3090 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . B 2 79.137 66.16 -57.469 1 21.83 ? N1 FMN 149 A 1 HETATM 2 C C2 FMN . . . B 2 79.325 67.149 -58.394 1 20.47 ? C2 FMN 149 A 1 HETATM 3 O O2 FMN . . . B 2 80.275 67.882 -58.403 1 26.35 ? O2 FMN 149 A 1 HETATM 4 N N3 FMN . . . B 2 78.342 67.329 -59.422 1 18.45 ? N3 FMN 149 A 1 HETATM 5 C C4 FMN . . . B 2 77.216 66.589 -59.561 1 21.54 ? C4 FMN 149 A 1 HETATM 6 O O4 FMN . . . B 2 76.419 66.811 -60.482 1 28.41 ? O4 FMN 149 A 1 HETATM 7 C C4A FMN . . . B 2 77.02 65.529 -58.578 1 16.21 ? C4A FMN 149 A 1 HETATM 8 N N5 FMN . . . B 2 75.957 64.748 -58.645 1 23.98 ? N5 FMN 149 A 1 HETATM 9 C C5A FMN . . . B 2 75.802 63.745 -57.727 1 22.56 ? C5A FMN 149 A 1 HETATM 10 C C6 FMN . . . B 2 74.644 62.859 -57.816 1 28.03 ? C6 FMN 149 A 1 HETATM 11 C C7 FMN . . . B 2 74.418 61.824 -56.959 1 29.91 ? C7 FMN 149 A 1 HETATM 12 C C7M FMN . . . B 2 73.195 60.904 -57.076 1 34.48 ? C7M FMN 149 A 1 HETATM 13 C C8 FMN . . . B 2 75.384 61.565 -55.868 1 31.22 ? C8 FMN 149 A 1 HETATM 14 C C8M FMN . . . B 2 75.184 60.425 -54.889 1 26.17 ? C8M FMN 149 A 1 HETATM 15 C C9 FMN . . . B 2 76.494 62.407 -55.768 1 25.6 ? C9 FMN 149 A 1 HETATM 16 C C9A FMN . . . B 2 76.742 63.484 -56.652 1 23.18 ? C9A FMN 149 A 1 HETATM 17 N N10 FMN . . . B 2 77.865 64.361 -56.598 1 22.54 ? N10 FMN 149 A 1 HETATM 18 C C10 FMN . . . B 2 78.059 65.376 -57.53 1 19.86 ? C10 FMN 149 A 1 HETATM 19 C C1' FMN . . . B 2 78.892 64.188 -55.548 1 23.03 ? C1' FMN 149 A 1 HETATM 20 C C2' FMN . . . B 2 78.543 64.948 -54.271 1 27.72 ? C2' FMN 149 A 1 HETATM 21 O O2' FMN . . . B 2 78.387 66.359 -54.481 1 24.24 ? O2' FMN 149 A 1 HETATM 22 C C3' FMN . . . B 2 79.659 64.719 -53.228 1 25.79 ? C3' FMN 149 A 1 HETATM 23 O O3' FMN . . . B 2 79.434 63.397 -52.631 1 30.51 ? O3' FMN 149 A 1 HETATM 24 C C4' FMN . . . B 2 79.713 65.761 -52.125 1 26.18 ? C4' FMN 149 A 1 HETATM 25 O O4' FMN . . . B 2 80.818 65.441 -51.246 1 26.78 ? O4' FMN 149 A 1 HETATM 26 C C5' FMN . . . B 2 78.471 65.811 -51.268 1 24.34 ? C5' FMN 149 A 1 HETATM 27 O O5' FMN . . . B 2 78.568 66.84 -50.26 1 28.11 ? O5' FMN 149 A 1 HETATM 28 P P FMN . . . B 2 77.618 66.78 -49.016 1 29.76 ? P FMN 149 A 1 HETATM 29 O O1P FMN . . . B 2 76.415 67.65 -48.921 1 30.87 ? O1P FMN 149 A 1 HETATM 30 O O2P FMN . . . B 2 78.237 66.176 -47.778 1 30.98 ? O2P FMN 149 A 1 HETATM 31 O O3P FMN . . . B 2 78.379 68.118 -48.668 1 20.03 ? O3P FMN 149 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #