data_1J9Z # _model_server_result.job_id CTe_1cu4Z5p1ZxuqV5ooLA _model_server_result.datetime_utc '2024-10-14 18:32:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1j9z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":851}' # _entry.id 1J9Z # _exptl.entry_id 1J9Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1J9Z _cell.length_a 101.634 _cell.length_b 116.057 _cell.length_c 118.749 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1J9Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 174 n n N1 C10 FMN doub 175 n n C2 O2 FMN doub 176 n n C2 N3 FMN sing 177 n n N3 C4 FMN sing 178 n n N3 HN3 FMN sing 179 n n C4 O4 FMN doub 180 n n C4 C4A FMN sing 181 n n C4A N5 FMN doub 182 n n C4A C10 FMN sing 183 n n N5 C5A FMN sing 184 n n C5A C6 FMN doub 185 n y C5A C9A FMN sing 186 n y C6 C7 FMN sing 187 n y C6 H6 FMN sing 188 n n C7 C7M FMN sing 189 n n C7 C8 FMN doub 190 n y C7M HM71 FMN sing 191 n n C7M HM72 FMN sing 192 n n C7M HM73 FMN sing 193 n n C8 C8M FMN sing 194 n n C8 C9 FMN sing 195 n y C8M HM81 FMN sing 196 n n C8M HM82 FMN sing 197 n n C8M HM83 FMN sing 198 n n C9 C9A FMN doub 199 n y C9 H9 FMN sing 200 n n C9A N10 FMN sing 201 n n N10 C10 FMN sing 202 n n N10 C1' FMN sing 203 n n C1' C2' FMN sing 204 n n C1' "H1'1" FMN sing 205 n n C1' "H1'2" FMN sing 206 n n C2' O2' FMN sing 207 n n C2' C3' FMN sing 208 n n C2' H2' FMN sing 209 n n O2' HO2' FMN sing 210 n n C3' O3' FMN sing 211 n n C3' C4' FMN sing 212 n n C3' H3' FMN sing 213 n n O3' HO3' FMN sing 214 n n C4' O4' FMN sing 215 n n C4' C5' FMN sing 216 n n C4' H4' FMN sing 217 n n O4' HO4' FMN sing 218 n n C5' O5' FMN sing 219 n n C5' "H5'1" FMN sing 220 n n C5' "H5'2" FMN sing 221 n n O5' P FMN sing 222 n n P O1P FMN doub 223 n n P O2P FMN sing 224 n n P O3P FMN sing 225 n n O2P HOP2 FMN sing 226 n n O3P HOP3 FMN sing 227 n n # _atom_sites.entry_id 1J9Z _atom_sites.fract_transf_matrix[1][1] 0.009839 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008616 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008421 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FAD A 1 750 750 FAD FAD . D 3 FMN A 1 751 751 FMN FMN . E 4 NAP A 1 752 752 NAP NAP . F 2 FAD B 1 850 750 FAD FAD . G 3 FMN B 1 851 751 FMN FMN . H 4 NAP B 1 852 752 NAP NAP . I 5 HOH A 1 753 2 HOH HOH . I 5 HOH A 2 754 3 HOH HOH . I 5 HOH A 3 755 4 HOH HOH . I 5 HOH A 4 756 5 HOH HOH . I 5 HOH A 5 757 6 HOH HOH . I 5 HOH A 6 758 7 HOH HOH . I 5 HOH A 7 759 8 HOH HOH . I 5 HOH A 8 760 9 HOH HOH . I 5 HOH A 9 761 11 HOH HOH . I 5 HOH A 10 762 12 HOH HOH . I 5 HOH A 11 763 13 HOH HOH . I 5 HOH A 12 764 14 HOH HOH . I 5 HOH A 13 765 18 HOH HOH . I 5 HOH A 14 766 19 HOH HOH . I 5 HOH A 15 767 22 HOH HOH . I 5 HOH A 16 768 23 HOH HOH . I 5 HOH A 17 769 26 HOH HOH . I 5 HOH A 18 770 27 HOH HOH . I 5 HOH A 19 771 28 HOH HOH . I 5 HOH A 20 772 29 HOH HOH . I 5 HOH A 21 773 32 HOH HOH . I 5 HOH A 22 774 34 HOH HOH . I 5 HOH A 23 775 35 HOH HOH . I 5 HOH A 24 776 37 HOH HOH . I 5 HOH A 25 777 38 HOH HOH . I 5 HOH A 26 778 39 HOH HOH . I 5 HOH A 27 779 40 HOH HOH . I 5 HOH A 28 780 43 HOH HOH . I 5 HOH A 29 781 44 HOH HOH . I 5 HOH A 30 782 46 HOH HOH . I 5 HOH A 31 783 47 HOH HOH . I 5 HOH A 32 784 48 HOH HOH . I 5 HOH A 33 785 51 HOH HOH . I 5 HOH A 34 786 55 HOH HOH . I 5 HOH A 35 787 56 HOH HOH . I 5 HOH A 36 788 57 HOH HOH . I 5 HOH A 37 789 61 HOH HOH . I 5 HOH A 38 790 62 HOH HOH . I 5 HOH A 39 791 63 HOH HOH . I 5 HOH A 40 792 65 HOH HOH . I 5 HOH A 41 793 68 HOH HOH . I 5 HOH A 42 794 69 HOH HOH . I 5 HOH A 43 795 72 HOH HOH . I 5 HOH A 44 796 75 HOH HOH . I 5 HOH A 45 797 76 HOH HOH . I 5 HOH A 46 798 78 HOH HOH . I 5 HOH A 47 799 80 HOH HOH . I 5 HOH A 48 800 81 HOH HOH . I 5 HOH A 49 801 82 HOH HOH . I 5 HOH A 50 802 85 HOH HOH . I 5 HOH A 51 803 87 HOH HOH . I 5 HOH A 52 804 88 HOH HOH . I 5 HOH A 53 805 89 HOH HOH . I 5 HOH A 54 806 90 HOH HOH . I 5 HOH A 55 807 91 HOH HOH . I 5 HOH A 56 808 95 HOH HOH . I 5 HOH A 57 809 98 HOH HOH . I 5 HOH A 58 810 100 HOH HOH . I 5 HOH A 59 811 102 HOH HOH . I 5 HOH A 60 812 104 HOH HOH . I 5 HOH A 61 813 105 HOH HOH . I 5 HOH A 62 814 107 HOH HOH . I 5 HOH A 63 815 108 HOH HOH . I 5 HOH A 64 816 114 HOH HOH . I 5 HOH A 65 817 117 HOH HOH . I 5 HOH A 66 818 119 HOH HOH . I 5 HOH A 67 819 120 HOH HOH . I 5 HOH A 68 820 121 HOH HOH . I 5 HOH A 69 821 122 HOH HOH . I 5 HOH A 70 822 125 HOH HOH . I 5 HOH A 71 823 127 HOH HOH . I 5 HOH A 72 824 130 HOH HOH . I 5 HOH A 73 825 131 HOH HOH . I 5 HOH A 74 826 134 HOH HOH . I 5 HOH A 75 827 135 HOH HOH . I 5 HOH A 76 828 137 HOH HOH . I 5 HOH A 77 829 139 HOH HOH . I 5 HOH A 78 830 140 HOH HOH . I 5 HOH A 79 831 142 HOH HOH . I 5 HOH A 80 832 144 HOH HOH . I 5 HOH A 81 833 147 HOH HOH . I 5 HOH A 82 834 150 HOH HOH . I 5 HOH A 83 835 151 HOH HOH . I 5 HOH A 84 836 152 HOH HOH . I 5 HOH A 85 837 153 HOH HOH . I 5 HOH A 86 838 156 HOH HOH . I 5 HOH A 87 839 159 HOH HOH . I 5 HOH A 88 840 160 HOH HOH . I 5 HOH A 89 841 161 HOH HOH . I 5 HOH A 90 842 163 HOH HOH . I 5 HOH A 91 843 165 HOH HOH . I 5 HOH A 92 844 166 HOH HOH . I 5 HOH A 93 845 167 HOH HOH . I 5 HOH A 94 846 175 HOH HOH . I 5 HOH A 95 847 176 HOH HOH . I 5 HOH A 96 848 177 HOH HOH . I 5 HOH A 97 849 180 HOH HOH . I 5 HOH A 98 850 181 HOH HOH . I 5 HOH A 99 851 182 HOH HOH . I 5 HOH A 100 852 183 HOH HOH . I 5 HOH A 101 853 184 HOH HOH . I 5 HOH A 102 854 190 HOH HOH . I 5 HOH A 103 855 194 HOH HOH . I 5 HOH A 104 856 198 HOH HOH . I 5 HOH A 105 857 199 HOH HOH . I 5 HOH A 106 858 200 HOH HOH . I 5 HOH A 107 859 202 HOH HOH . I 5 HOH A 108 860 207 HOH HOH . I 5 HOH A 109 861 209 HOH HOH . J 5 HOH B 1 853 1 HOH HOH . J 5 HOH B 2 854 10 HOH HOH . J 5 HOH B 3 855 15 HOH HOH . J 5 HOH B 4 856 16 HOH HOH . J 5 HOH B 5 857 17 HOH HOH . J 5 HOH B 6 858 20 HOH HOH . J 5 HOH B 7 859 21 HOH HOH . J 5 HOH B 8 860 24 HOH HOH . J 5 HOH B 9 861 25 HOH HOH . J 5 HOH B 10 862 30 HOH HOH . J 5 HOH B 11 863 31 HOH HOH . J 5 HOH B 12 864 33 HOH HOH . J 5 HOH B 13 865 36 HOH HOH . J 5 HOH B 14 866 41 HOH HOH . J 5 HOH B 15 867 42 HOH HOH . J 5 HOH B 16 868 45 HOH HOH . J 5 HOH B 17 869 49 HOH HOH . J 5 HOH B 18 870 50 HOH HOH . J 5 HOH B 19 871 52 HOH HOH . J 5 HOH B 20 872 53 HOH HOH . J 5 HOH B 21 873 54 HOH HOH . J 5 HOH B 22 874 58 HOH HOH . J 5 HOH B 23 875 59 HOH HOH . J 5 HOH B 24 876 60 HOH HOH . J 5 HOH B 25 877 64 HOH HOH . J 5 HOH B 26 878 66 HOH HOH . J 5 HOH B 27 879 67 HOH HOH . J 5 HOH B 28 880 70 HOH HOH . J 5 HOH B 29 881 71 HOH HOH . J 5 HOH B 30 882 73 HOH HOH . J 5 HOH B 31 883 74 HOH HOH . J 5 HOH B 32 884 77 HOH HOH . J 5 HOH B 33 885 79 HOH HOH . J 5 HOH B 34 886 83 HOH HOH . J 5 HOH B 35 887 84 HOH HOH . J 5 HOH B 36 888 86 HOH HOH . J 5 HOH B 37 889 92 HOH HOH . J 5 HOH B 38 890 93 HOH HOH . J 5 HOH B 39 891 94 HOH HOH . J 5 HOH B 40 892 96 HOH HOH . J 5 HOH B 41 893 97 HOH HOH . J 5 HOH B 42 894 99 HOH HOH . J 5 HOH B 43 895 101 HOH HOH . J 5 HOH B 44 896 103 HOH HOH . J 5 HOH B 45 897 106 HOH HOH . J 5 HOH B 46 898 109 HOH HOH . J 5 HOH B 47 899 110 HOH HOH . J 5 HOH B 48 900 111 HOH HOH . J 5 HOH B 49 901 112 HOH HOH . J 5 HOH B 50 902 113 HOH HOH . J 5 HOH B 51 903 115 HOH HOH . J 5 HOH B 52 904 116 HOH HOH . J 5 HOH B 53 905 118 HOH HOH . J 5 HOH B 54 906 123 HOH HOH . J 5 HOH B 55 907 124 HOH HOH . J 5 HOH B 56 908 126 HOH HOH . J 5 HOH B 57 909 128 HOH HOH . J 5 HOH B 58 910 129 HOH HOH . J 5 HOH B 59 911 132 HOH HOH . J 5 HOH B 60 912 133 HOH HOH . J 5 HOH B 61 913 136 HOH HOH . J 5 HOH B 62 914 138 HOH HOH . J 5 HOH B 63 915 141 HOH HOH . J 5 HOH B 64 916 143 HOH HOH . J 5 HOH B 65 917 145 HOH HOH . J 5 HOH B 66 918 146 HOH HOH . J 5 HOH B 67 919 148 HOH HOH . J 5 HOH B 68 920 149 HOH HOH . J 5 HOH B 69 921 154 HOH HOH . J 5 HOH B 70 922 155 HOH HOH . J 5 HOH B 71 923 157 HOH HOH . J 5 HOH B 72 924 158 HOH HOH . J 5 HOH B 73 925 162 HOH HOH . J 5 HOH B 74 926 164 HOH HOH . J 5 HOH B 75 927 168 HOH HOH . J 5 HOH B 76 928 169 HOH HOH . J 5 HOH B 77 929 170 HOH HOH . J 5 HOH B 78 930 171 HOH HOH . J 5 HOH B 79 931 172 HOH HOH . J 5 HOH B 80 932 173 HOH HOH . J 5 HOH B 81 933 174 HOH HOH . J 5 HOH B 82 934 178 HOH HOH . J 5 HOH B 83 935 179 HOH HOH . J 5 HOH B 84 936 185 HOH HOH . J 5 HOH B 85 937 186 HOH HOH . J 5 HOH B 86 938 187 HOH HOH . J 5 HOH B 87 939 188 HOH HOH . J 5 HOH B 88 940 189 HOH HOH . J 5 HOH B 89 941 191 HOH HOH . J 5 HOH B 90 942 192 HOH HOH . J 5 HOH B 91 943 193 HOH HOH . J 5 HOH B 92 944 195 HOH HOH . J 5 HOH B 93 945 196 HOH HOH . J 5 HOH B 94 946 197 HOH HOH . J 5 HOH B 95 947 201 HOH HOH . J 5 HOH B 96 948 203 HOH HOH . J 5 HOH B 97 949 204 HOH HOH . J 5 HOH B 98 950 205 HOH HOH . J 5 HOH B 99 951 206 HOH HOH . J 5 HOH B 100 952 208 HOH HOH . J 5 HOH B 101 953 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . G 3 45.118 26.344 42.383 1 94.16 ? N1 FMN 851 B 1 HETATM 2 C C2 FMN . . . G 3 45.981 26.194 43.443 1 94.41 ? C2 FMN 851 B 1 HETATM 3 O O2 FMN . . . G 3 45.586 25.927 44.573 1 94.3 ? O2 FMN 851 B 1 HETATM 4 N N3 FMN . . . G 3 47.325 26.352 43.194 1 94.74 ? N3 FMN 851 B 1 HETATM 5 C C4 FMN . . . G 3 47.939 26.646 42 1 94.46 ? C4 FMN 851 B 1 HETATM 6 O O4 FMN . . . G 3 49.171 26.728 42.071 1 94.66 ? O4 FMN 851 B 1 HETATM 7 C C4A FMN . . . G 3 47.058 26.808 40.852 1 93.8 ? C4A FMN 851 B 1 HETATM 8 N N5 FMN . . . G 3 47.641 27.099 39.617 1 93.46 ? N5 FMN 851 B 1 HETATM 9 C C5A FMN . . . G 3 46.76 27.234 38.554 1 92.92 ? C5A FMN 851 B 1 HETATM 10 C C6 FMN . . . G 3 47.382 27.524 37.297 1 93.05 ? C6 FMN 851 B 1 HETATM 11 C C7 FMN . . . G 3 46.645 27.688 36.119 1 92.69 ? C7 FMN 851 B 1 HETATM 12 C C7M FMN . . . G 3 47.472 27.996 34.86 1 92.24 ? C7M FMN 851 B 1 HETATM 13 C C8 FMN . . . G 3 45.154 27.564 36.14 1 91.87 ? C8 FMN 851 B 1 HETATM 14 C C8M FMN . . . G 3 44.244 27.728 34.897 1 90.55 ? C8M FMN 851 B 1 HETATM 15 C C9 FMN . . . G 3 44.529 27.284 37.346 1 91.78 ? C9 FMN 851 B 1 HETATM 16 C C9A FMN . . . G 3 45.294 27.108 38.594 1 92.17 ? C9A FMN 851 B 1 HETATM 17 N N10 FMN . . . G 3 44.719 26.802 39.933 1 91.69 ? N10 FMN 851 B 1 HETATM 18 C C10 FMN . . . G 3 45.638 26.642 41.118 1 93.27 ? C10 FMN 851 B 1 HETATM 19 C C1' FMN . . . G 3 43.282 26.655 40.067 1 89.15 ? C1' FMN 851 B 1 HETATM 20 C C2' FMN . . . G 3 42.565 27.988 40.346 1 86.85 ? C2' FMN 851 B 1 HETATM 21 O O2' FMN . . . G 3 43.103 28.477 41.592 1 87.26 ? O2' FMN 851 B 1 HETATM 22 C C3' FMN . . . G 3 41.032 27.848 40.4 1 84.99 ? C3' FMN 851 B 1 HETATM 23 O O3' FMN . . . G 3 40.594 27.314 39.141 1 85.33 ? O3' FMN 851 B 1 HETATM 24 C C4' FMN . . . G 3 40.439 29.287 40.693 1 82.48 ? C4' FMN 851 B 1 HETATM 25 O O4' FMN . . . G 3 38.996 29.042 40.726 1 82.81 ? O4' FMN 851 B 1 HETATM 26 C C5' FMN . . . G 3 40.722 30.342 39.617 1 79.69 ? C5' FMN 851 B 1 HETATM 27 O O5' FMN . . . G 3 40.158 31.632 40.06 1 76.61 ? O5' FMN 851 B 1 HETATM 28 P P FMN . . . G 3 39.955 33.023 39.262 1 75.3 ? P FMN 851 B 1 HETATM 29 O O1P FMN . . . G 3 38.943 32.911 38.204 1 75.79 ? O1P FMN 851 B 1 HETATM 30 O O2P FMN . . . G 3 41.253 33.584 38.887 1 77 ? O2P FMN 851 B 1 HETATM 31 O O3P FMN . . . G 3 39.383 33.792 40.359 1 75.71 ? O3P FMN 851 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 35 _model_server_stats.query_time_ms 604 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 31 #