data_1JAQ # _model_server_result.job_id nSmDgM-7cw4n6ojbeRy8fQ _model_server_result.datetime_utc '2024-10-18 16:24:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jaq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 1JAQ # _exptl.entry_id 1JAQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.327 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(2R)-2-(hydroxycarbamoyl)-4-methylpentanoyl]-L-alanylglycinamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JAQ _cell.length_a 33.13 _cell.length_b 69.37 _cell.length_c 72.31 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JAQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C OH 01S . A 01S 1 1_555 F ZN ZN . A ZN 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc2 A O ASP 58 A ASP 137 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? metalc ? metalc3 A NE2 HIS 68 A HIS 147 1_555 E ZN ZN . A ZN 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? metalc ? metalc4 A OD2 ASP 70 A ASP 149 1_555 E ZN ZN . A ZN 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.818 ? metalc ? metalc5 A OD1 ASP 75 A ASP 154 1_555 D CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc6 A O GLY 76 A GLY 155 1_555 D CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc7 A O ASN 78 A ASN 157 1_555 D CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc8 A O ILE 80 A ILE 159 1_555 D CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc9 A NE2 HIS 83 A HIS 162 1_555 E ZN ZN . A ZN 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? metalc ? metalc10 A O GLY 90 A GLY 169 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc11 A O GLY 92 A GLY 171 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc12 A OD1 ASP 94 A ASP 173 1_555 B CA CA . A CA 996 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.596 ? metalc ? metalc13 A ND1 HIS 96 A HIS 175 1_555 E ZN ZN . A ZN 998 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc14 A OD2 ASP 98 A ASP 177 1_555 D CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.646 ? metalc ? metalc15 A OE2 GLU 101 A GLU 180 1_555 D CA CA . A CA 997 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.159 ? metalc ? metalc16 A NE2 HIS 118 A HIS 197 1_555 F ZN ZN . A ZN 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.873 ? metalc ? metalc17 A NE2 HIS 122 A HIS 201 1_555 F ZN ZN . A ZN 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc18 A NE2 HIS 128 A HIS 207 1_555 F ZN ZN . A ZN 999 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc19 B CA CA . A CA 996 1_555 G O HOH . A HOH 1026 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? # _chem_comp.formula 'C12 H22 N4 O5' _chem_comp.formula_weight 302.327 _chem_comp.id 01S _chem_comp.mon_nstd_flag . _chem_comp.name N-[(2R)-2-(hydroxycarbamoyl)-4-methylpentanoyl]-L-alanylglycinamide _chem_comp.type peptide-like _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N OH 01S sing 1 n n N C1 01S sing 2 n n N HN 01S sing 3 n n OH HOH 01S sing 4 n n C1 O1 01S doub 5 n n C1 CA 01S sing 6 n n CA CB 01S sing 7 n n CA C 01S sing 8 n n CA HA 01S sing 9 n n CB CG 01S sing 10 n n CB HB1 01S sing 11 n n CB HB2 01S sing 12 n n CG CD1 01S sing 13 n n CG CD2 01S sing 14 n n CG HG 01S sing 15 n n CD1 HD11 01S sing 16 n n CD1 HD12 01S sing 17 n n CD1 HD13 01S sing 18 n n CD2 HD21 01S sing 19 n n CD2 HD22 01S sing 20 n n CD2 HD23 01S sing 21 n n C O 01S doub 22 n n N1 CA1 01S sing 23 n n N1 H 01S sing 24 n n CA1 C2 01S sing 25 n n CA1 CB1 01S sing 26 n n CA1 HA1 01S sing 27 n n C2 O2 01S doub 28 n n CB1 HB11 01S sing 29 n n CB1 HB21 01S sing 30 n n CB1 HB3 01S sing 31 n n N2 CA2 01S sing 32 n n N2 H1 01S sing 33 n n CA2 C3 01S sing 34 n n CA2 HA2 01S sing 35 n n CA2 HA3 01S sing 36 n n C3 O3 01S doub 37 n n N3 HN1 01S sing 38 n n N3 HN2 01S sing 39 n n C N1 01S sing 40 n n C2 N2 01S sing 41 n n C3 N3 01S sing 42 n n # _atom_sites.entry_id 1JAQ _atom_sites.fract_transf_matrix[1][1] 0.030184 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014415 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013829 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 996 996 CA CA . C 3 01S A 1 1 1 01S HMI . D 2 CA A 1 997 997 CA CA . E 4 ZN A 1 998 998 ZN ZN . F 4 ZN A 1 999 999 ZN ZN . G 5 HOH A 1 1000 1000 HOH HOH . G 5 HOH A 2 1001 1001 HOH HOH . G 5 HOH A 3 1002 1002 HOH HOH . G 5 HOH A 4 1003 1003 HOH HOH . G 5 HOH A 5 1004 1004 HOH HOH . G 5 HOH A 6 1005 1005 HOH HOH . G 5 HOH A 7 1006 1006 HOH HOH . G 5 HOH A 8 1007 1007 HOH HOH . G 5 HOH A 9 1008 1008 HOH HOH . G 5 HOH A 10 1009 1009 HOH HOH . G 5 HOH A 11 1010 1010 HOH HOH . G 5 HOH A 12 1011 1011 HOH HOH . G 5 HOH A 13 1012 1012 HOH HOH . G 5 HOH A 14 1013 1013 HOH HOH . G 5 HOH A 15 1014 1014 HOH HOH . G 5 HOH A 16 1015 1015 HOH HOH . G 5 HOH A 17 1016 1016 HOH HOH . G 5 HOH A 18 1017 1017 HOH HOH . G 5 HOH A 19 1018 1018 HOH HOH . G 5 HOH A 20 1019 1019 HOH HOH . G 5 HOH A 21 1020 1020 HOH HOH . G 5 HOH A 22 1021 1021 HOH HOH . G 5 HOH A 23 1022 1022 HOH HOH . G 5 HOH A 24 1023 1023 HOH HOH . G 5 HOH A 25 1024 1024 HOH HOH . G 5 HOH A 26 1025 1025 HOH HOH . G 5 HOH A 27 1026 1026 HOH HOH . G 5 HOH A 28 1027 1027 HOH HOH . G 5 HOH A 29 1028 1028 HOH HOH . G 5 HOH A 30 1029 1029 HOH HOH . G 5 HOH A 31 1030 1030 HOH HOH . G 5 HOH A 32 1031 1031 HOH HOH . G 5 HOH A 33 1032 1032 HOH HOH . G 5 HOH A 34 1033 1033 HOH HOH . G 5 HOH A 35 1034 1034 HOH HOH . G 5 HOH A 36 1035 1035 HOH HOH . G 5 HOH A 37 1036 1036 HOH HOH . G 5 HOH A 38 1037 1037 HOH HOH . G 5 HOH A 39 1038 1038 HOH HOH . G 5 HOH A 40 1039 1039 HOH HOH . G 5 HOH A 41 1040 1040 HOH HOH . G 5 HOH A 42 1041 1041 HOH HOH . G 5 HOH A 43 1042 1042 HOH HOH . G 5 HOH A 44 1043 1043 HOH HOH . G 5 HOH A 45 1044 1044 HOH HOH . G 5 HOH A 46 1045 1045 HOH HOH . G 5 HOH A 47 1046 1046 HOH HOH . G 5 HOH A 48 1047 1047 HOH HOH . G 5 HOH A 49 1048 1048 HOH HOH . G 5 HOH A 50 1049 1049 HOH HOH . G 5 HOH A 51 1050 1050 HOH HOH . G 5 HOH A 52 1051 1051 HOH HOH . G 5 HOH A 53 1052 1052 HOH HOH . G 5 HOH A 54 1053 1053 HOH HOH . G 5 HOH A 55 1054 1054 HOH HOH . G 5 HOH A 56 1055 1055 HOH HOH . G 5 HOH A 57 1056 1056 HOH HOH . G 5 HOH A 58 1057 1057 HOH HOH . G 5 HOH A 59 1058 1058 HOH HOH . G 5 HOH A 60 1059 1059 HOH HOH . G 5 HOH A 61 1060 1060 HOH HOH . G 5 HOH A 62 1061 1061 HOH HOH . G 5 HOH A 63 1062 1062 HOH HOH . G 5 HOH A 64 1063 1063 HOH HOH . G 5 HOH A 65 1064 1064 HOH HOH . G 5 HOH A 66 1065 1065 HOH HOH . G 5 HOH A 67 1066 1066 HOH HOH . G 5 HOH A 68 1067 1067 HOH HOH . G 5 HOH A 69 1068 1068 HOH HOH . G 5 HOH A 70 1069 1069 HOH HOH . G 5 HOH A 71 1070 1070 HOH HOH . G 5 HOH A 72 1071 1071 HOH HOH . G 5 HOH A 73 1072 1072 HOH HOH . G 5 HOH A 74 1073 1073 HOH HOH . G 5 HOH A 75 1074 1074 HOH HOH . G 5 HOH A 76 1075 1075 HOH HOH . G 5 HOH A 77 1076 1076 HOH HOH . G 5 HOH A 78 1077 1077 HOH HOH . G 5 HOH A 79 1078 1078 HOH HOH . G 5 HOH A 80 1079 1079 HOH HOH . G 5 HOH A 81 1080 1080 HOH HOH . G 5 HOH A 82 1081 1081 HOH HOH . G 5 HOH A 83 1082 1082 HOH HOH . G 5 HOH A 84 1083 1083 HOH HOH . G 5 HOH A 85 1084 1084 HOH HOH . G 5 HOH A 86 1085 1085 HOH HOH . G 5 HOH A 87 1086 1086 HOH HOH . G 5 HOH A 88 1087 1087 HOH HOH . G 5 HOH A 89 1088 1088 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N 01S . . . C 3 25.583 60.08 53.721 1 13.58 ? N 01S 1 A 1 HETATM 2 O OH 01S . . . C 3 24.719 59.081 54.16 1 14.55 ? OH 01S 1 A 1 HETATM 3 C C1 01S . . . C 3 26.843 59.771 53.49 1 13.79 ? C1 01S 1 A 1 HETATM 4 O O1 01S . . . C 3 27.255 58.647 53.667 1 14.54 ? O1 01S 1 A 1 HETATM 5 C CA 01S . . . C 3 27.771 60.891 52.984 1 12.08 ? CA 01S 1 A 1 HETATM 6 C CB 01S . . . C 3 29.001 60.947 53.859 1 14.47 ? CB 01S 1 A 1 HETATM 7 C CG 01S . . . C 3 28.946 61.984 54.984 1 19.35 ? CG 01S 1 A 1 HETATM 8 C CD1 01S . . . C 3 29.266 63.387 54.451 1 19.73 ? CD1 01S 1 A 1 HETATM 9 C CD2 01S . . . C 3 27.573 61.958 55.715 1 20.62 ? CD2 01S 1 A 1 HETATM 10 C C 01S . . . C 3 28.199 60.603 51.554 1 12.03 ? C 01S 1 A 1 HETATM 11 O O 01S . . . C 3 27.986 61.407 50.641 1 9.01 ? O 01S 1 A 1 HETATM 12 N N1 01S . . . C 3 28.856 59.473 51.355 1 12.96 ? N1 01S 1 A 1 HETATM 13 C CA1 01S . . . C 3 29.325 59.154 50.027 1 13.75 ? CA1 01S 1 A 1 HETATM 14 C C2 01S . . . C 3 28.242 58.41 49.224 1 14.51 ? C2 01S 1 A 1 HETATM 15 O O2 01S . . . C 3 28.469 58.028 48.074 1 13.68 ? O2 01S 1 A 1 HETATM 16 C CB1 01S . . . C 3 30.614 58.385 50.103 1 15 ? CB1 01S 1 A 1 HETATM 17 N N2 01S . . . C 3 27.13 58.102 49.91 1 14.31 ? N2 01S 1 A 1 HETATM 18 C CA2 01S . . . C 3 25.943 57.518 49.308 1 11.63 ? CA2 01S 1 A 1 HETATM 19 C C3 01S . . . C 3 25.937 56.117 48.829 1 11.67 ? C3 01S 1 A 1 HETATM 20 O O3 01S . . . C 3 25.168 55.836 47.908 1 12.7 ? O3 01S 1 A 1 HETATM 21 N N3 01S . . . C 3 26.392 55.206 49.678 1 12.63 ? N3 01S 1 A 1 HETATM 22 H HN 01S . . . C 3 25.293 61.002 53.568 1 15 ? HN 01S 1 A 1 HETATM 23 H HOH 01S . . . C 3 23.82 59.154 53.861 1 15 ? HOH 01S 1 A 1 HETATM 24 H H 01S . . . C 3 28.985 58.861 52.116 1 15 ? H 01S 1 A 1 HETATM 25 H H1 01S . . . C 3 27.139 58.233 50.876 1 15 ? H1 01S 1 A 1 HETATM 26 H HN1 01S . . . C 3 26.397 54.199 49.479 1 15 ? HN1 01S 1 A 1 HETATM 27 H HN2 01S . . . C 3 26.695 55.508 50.592 1 15 ? HN2 01S 1 A 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 27 #