data_1JER # _model_server_result.job_id SqO-BenU4hbV7rmAgDbF2Q _model_server_result.datetime_utc '2025-03-05 21:11:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jer # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":138}' # _entry.id 1JER # _exptl.entry_id 1JER _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 63.546 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COPPER (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1JER _cell.length_a 59.18 _cell.length_b 59.18 _cell.length_c 74.21 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JER _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_766 -x+2,-x+y+1,-z+4/3 -0.5 -0.866025 0 -0.866025 0.5 0 0 0 -1 88.77 51.251383 98.946667 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 61 A CYS 60 1_555 A SG CYS 96 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? metalc ? metalc1 A ND1 HIS 47 A HIS 46 1_555 B CU CU . A CU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc2 A SG CYS 90 A CYS 89 1_555 B CU CU . A CU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.178 ? metalc ? metalc3 A ND1 HIS 95 A HIS 94 1_555 B CU CU . A CU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc4 A OE1 GLN 100 A GLN 99 1_555 B CU CU . A CU 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? # _chem_comp.formula 'Cu 2' _chem_comp.formula_weight 63.546 _chem_comp.id CU _chem_comp.mon_nstd_flag . _chem_comp.name 'COPPER (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1JER _atom_sites.fract_transf_matrix[1][1] 0.016898 _atom_sites.fract_transf_matrix[1][2] 0.009756 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019512 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013475 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CU A 1 138 110 CU CU . C 3 HOH A 1 139 111 HOH HOH . C 3 HOH A 2 140 112 HOH HOH . C 3 HOH A 3 141 113 HOH HOH . C 3 HOH A 4 142 114 HOH HOH . C 3 HOH A 5 143 115 HOH HOH . C 3 HOH A 6 144 116 HOH HOH . C 3 HOH A 7 145 117 HOH HOH . C 3 HOH A 8 146 118 HOH HOH . C 3 HOH A 9 147 119 HOH HOH . C 3 HOH A 10 148 120 HOH HOH . C 3 HOH A 11 149 121 HOH HOH . C 3 HOH A 12 150 122 HOH HOH . C 3 HOH A 13 151 123 HOH HOH . C 3 HOH A 14 152 124 HOH HOH . C 3 HOH A 15 153 125 HOH HOH . C 3 HOH A 16 154 126 HOH HOH . C 3 HOH A 17 155 127 HOH HOH . C 3 HOH A 18 156 128 HOH HOH . C 3 HOH A 19 157 129 HOH HOH . C 3 HOH A 20 158 130 HOH HOH . C 3 HOH A 21 159 131 HOH HOH . C 3 HOH A 22 160 132 HOH HOH . C 3 HOH A 23 161 133 HOH HOH . C 3 HOH A 24 162 134 HOH HOH . C 3 HOH A 25 163 135 HOH HOH . C 3 HOH A 26 164 136 HOH HOH . C 3 HOH A 27 165 137 HOH HOH . C 3 HOH A 28 166 138 HOH HOH . C 3 HOH A 29 167 139 HOH HOH . C 3 HOH A 30 168 140 HOH HOH . C 3 HOH A 31 169 141 HOH HOH . C 3 HOH A 32 170 142 HOH HOH . C 3 HOH A 33 171 143 HOH HOH . C 3 HOH A 34 172 144 HOH HOH . C 3 HOH A 35 173 145 HOH HOH . C 3 HOH A 36 174 146 HOH HOH . C 3 HOH A 37 175 147 HOH HOH . C 3 HOH A 38 176 148 HOH HOH . C 3 HOH A 39 177 149 HOH HOH . C 3 HOH A 40 178 150 HOH HOH . C 3 HOH A 41 179 151 HOH HOH . C 3 HOH A 42 180 152 HOH HOH . C 3 HOH A 43 181 153 HOH HOH . C 3 HOH A 44 182 154 HOH HOH . C 3 HOH A 45 183 155 HOH HOH . C 3 HOH A 46 184 156 HOH HOH . C 3 HOH A 47 185 157 HOH HOH . C 3 HOH A 48 186 158 HOH HOH . C 3 HOH A 49 187 159 HOH HOH . C 3 HOH A 50 188 160 HOH HOH . C 3 HOH A 51 189 161 HOH HOH . C 3 HOH A 52 190 162 HOH HOH . C 3 HOH A 53 191 163 HOH HOH . C 3 HOH A 54 192 164 HOH HOH . C 3 HOH A 55 193 165 HOH HOH . C 3 HOH A 56 194 166 HOH HOH . C 3 HOH A 57 195 167 HOH HOH . C 3 HOH A 58 196 168 HOH HOH . C 3 HOH A 59 197 169 HOH HOH . C 3 HOH A 60 198 170 HOH HOH . C 3 HOH A 61 199 171 HOH HOH . C 3 HOH A 62 200 172 HOH HOH . C 3 HOH A 63 201 173 HOH HOH . C 3 HOH A 64 202 174 HOH HOH . C 3 HOH A 65 203 175 HOH HOH . C 3 HOH A 66 204 176 HOH HOH . C 3 HOH A 67 205 177 HOH HOH . C 3 HOH A 68 206 178 HOH HOH . C 3 HOH A 69 207 179 HOH HOH . C 3 HOH A 70 208 180 HOH HOH . C 3 HOH A 71 209 181 HOH HOH . C 3 HOH A 72 210 182 HOH HOH . C 3 HOH A 73 211 183 HOH HOH . C 3 HOH A 74 212 184 HOH HOH . C 3 HOH A 75 213 185 HOH HOH . C 3 HOH A 76 214 186 HOH HOH . C 3 HOH A 77 215 187 HOH HOH . C 3 HOH A 78 216 188 HOH HOH . C 3 HOH A 79 217 189 HOH HOH . C 3 HOH A 80 218 190 HOH HOH . C 3 HOH A 81 219 191 HOH HOH . C 3 HOH A 82 220 192 HOH HOH . C 3 HOH A 83 221 193 HOH HOH . C 3 HOH A 84 222 194 HOH HOH . C 3 HOH A 85 223 195 HOH HOH . C 3 HOH A 86 224 196 HOH HOH . C 3 HOH A 87 225 197 HOH HOH . C 3 HOH A 88 226 198 HOH HOH . C 3 HOH A 89 227 199 HOH HOH . C 3 HOH A 90 228 200 HOH HOH . C 3 HOH A 91 229 201 HOH HOH . C 3 HOH A 92 230 202 HOH HOH . C 3 HOH A 93 231 203 HOH HOH . C 3 HOH A 94 232 204 HOH HOH . C 3 HOH A 95 233 205 HOH HOH . C 3 HOH A 96 234 206 HOH HOH . C 3 HOH A 97 235 207 HOH HOH . C 3 HOH A 98 236 208 HOH HOH . C 3 HOH A 99 237 209 HOH HOH . C 3 HOH A 100 238 210 HOH HOH . C 3 HOH A 101 239 211 HOH HOH . C 3 HOH A 102 240 212 HOH HOH . C 3 HOH A 103 241 213 HOH HOH . C 3 HOH A 104 242 214 HOH HOH . C 3 HOH A 105 243 215 HOH HOH . C 3 HOH A 106 244 216 HOH HOH . C 3 HOH A 107 245 217 HOH HOH . C 3 HOH A 108 246 218 HOH HOH . C 3 HOH A 109 247 219 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CU _atom_site.label_atom_id CU _atom_site.label_comp_id CU _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 28.919 _atom_site.Cartn_y 24.149 _atom_site.Cartn_z 36.393 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.32 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CU _atom_site.auth_comp_id CU _atom_site.auth_seq_id 138 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 1 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #