data_1JF0 # _model_server_result.job_id JfHI1dLXwQSOXEeX1KrXtQ _model_server_result.datetime_utc '2024-10-18 14:35:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jf0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":197}' # _entry.id 1JF0 # _exptl.entry_id 1JF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 455.462 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description C2-HYDROPEROXY-COELENTERAZINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JF0 _cell.length_a 33.502 _cell.length_b 67.823 _cell.length_c 69.209 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H21 N3 O5' _chem_comp.formula_weight 455.462 _chem_comp.id CZH _chem_comp.mon_nstd_flag . _chem_comp.name C2-HYDROPEROXY-COELENTERAZINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 8-BENZYL-2-HYDROPEROXY-2-(4-HYDROXY-BENZYL)-6-(4-HYDROXY-PHENYL)-2H-IMIDAZO[1,2-A]PYRAZIN-3-ONE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 CZH sing 83 n n N1 C9 CZH doub 84 n n C2 C3 CZH sing 85 n n C2 C10 CZH sing 86 n n C2 O33 CZH sing 87 n n C3 N4 CZH sing 88 n n C3 O18 CZH doub 89 n n N4 C5 CZH sing 90 n n N4 C9 CZH sing 91 n n C5 C6 CZH doub 92 n n C5 H5 CZH sing 93 n n C6 N7 CZH sing 94 n n C6 C19 CZH sing 95 n n N7 C8 CZH doub 96 n n C8 C9 CZH sing 97 n n C8 C26 CZH sing 98 n n C10 C11 CZH sing 99 n n C10 H101 CZH sing 100 n n C10 H102 CZH sing 101 n n C11 C12 CZH doub 102 n y C11 C16 CZH sing 103 n y C12 C13 CZH sing 104 n y C12 H12 CZH sing 105 n n C13 C14 CZH doub 106 n y C13 H13 CZH sing 107 n n C14 C15 CZH sing 108 n y C14 O17 CZH sing 109 n n C15 C16 CZH doub 110 n y C15 H15 CZH sing 111 n n C16 H16 CZH sing 112 n n O17 H17 CZH sing 113 n n C19 C20 CZH doub 114 n y C19 C24 CZH sing 115 n y C20 C21 CZH sing 116 n y C20 H20 CZH sing 117 n n C21 C22 CZH doub 118 n y C21 H21 CZH sing 119 n n C22 C23 CZH sing 120 n y C22 O25 CZH sing 121 n n C23 C24 CZH doub 122 n y C23 H23 CZH sing 123 n n C24 H24 CZH sing 124 n n O25 H25 CZH sing 125 n n C26 C27 CZH sing 126 n n C26 H261 CZH sing 127 n n C26 H262 CZH sing 128 n n C27 C28 CZH doub 129 n y C27 C32 CZH sing 130 n y C28 C29 CZH sing 131 n y C28 H28 CZH sing 132 n n C29 C30 CZH doub 133 n y C29 H29 CZH sing 134 n n C30 C31 CZH sing 135 n y C30 H30 CZH sing 136 n n C31 C32 CZH doub 137 n y C31 H31 CZH sing 138 n n C32 H32 CZH sing 139 n n O33 O34 CZH sing 140 n n O34 H34 CZH sing 141 n n # _atom_sites.entry_id 1JF0 _atom_sites.fract_transf_matrix[1][1] 0.029849 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014744 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014449 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CZH A 1 197 197 CZH CZH . C 3 HOH A 1 198 1 HOH TIP . C 3 HOH A 2 199 2 HOH TIP . C 3 HOH A 3 200 3 HOH TIP . C 3 HOH A 4 201 4 HOH TIP . C 3 HOH A 5 202 5 HOH TIP . C 3 HOH A 6 203 6 HOH TIP . C 3 HOH A 7 204 7 HOH TIP . C 3 HOH A 8 205 8 HOH TIP . C 3 HOH A 9 206 9 HOH TIP . C 3 HOH A 10 207 10 HOH TIP . C 3 HOH A 11 208 11 HOH TIP . C 3 HOH A 12 209 12 HOH TIP . C 3 HOH A 13 210 13 HOH TIP . C 3 HOH A 14 211 14 HOH TIP . C 3 HOH A 15 212 15 HOH TIP . C 3 HOH A 16 213 16 HOH TIP . C 3 HOH A 17 214 17 HOH TIP . C 3 HOH A 18 215 18 HOH TIP . C 3 HOH A 19 216 19 HOH TIP . C 3 HOH A 20 217 20 HOH TIP . C 3 HOH A 21 218 21 HOH TIP . C 3 HOH A 22 219 22 HOH TIP . C 3 HOH A 23 220 23 HOH TIP . C 3 HOH A 24 221 24 HOH TIP . C 3 HOH A 25 222 25 HOH TIP . C 3 HOH A 26 223 26 HOH TIP . C 3 HOH A 27 224 27 HOH TIP . C 3 HOH A 28 225 28 HOH TIP . C 3 HOH A 29 226 29 HOH TIP . C 3 HOH A 30 227 30 HOH TIP . C 3 HOH A 31 228 31 HOH TIP . C 3 HOH A 32 229 32 HOH TIP . C 3 HOH A 33 230 33 HOH TIP . C 3 HOH A 34 231 34 HOH TIP . C 3 HOH A 35 232 35 HOH TIP . C 3 HOH A 36 233 36 HOH TIP . C 3 HOH A 37 234 37 HOH TIP . C 3 HOH A 38 235 38 HOH TIP . C 3 HOH A 39 236 39 HOH TIP . C 3 HOH A 40 237 40 HOH TIP . C 3 HOH A 41 238 41 HOH TIP . C 3 HOH A 42 239 42 HOH TIP . C 3 HOH A 43 240 43 HOH TIP . C 3 HOH A 44 241 44 HOH TIP . C 3 HOH A 45 242 45 HOH TIP . C 3 HOH A 46 243 46 HOH TIP . C 3 HOH A 47 244 47 HOH TIP . C 3 HOH A 48 245 48 HOH TIP . C 3 HOH A 49 246 49 HOH TIP . C 3 HOH A 50 247 50 HOH TIP . C 3 HOH A 51 248 51 HOH TIP . C 3 HOH A 52 249 52 HOH TIP . C 3 HOH A 53 250 53 HOH TIP . C 3 HOH A 54 251 54 HOH TIP . C 3 HOH A 55 252 55 HOH TIP . C 3 HOH A 56 253 56 HOH TIP . C 3 HOH A 57 254 57 HOH TIP . C 3 HOH A 58 255 58 HOH TIP . C 3 HOH A 59 256 59 HOH TIP . C 3 HOH A 60 257 60 HOH TIP . C 3 HOH A 61 258 61 HOH TIP . C 3 HOH A 62 259 62 HOH TIP . C 3 HOH A 63 260 63 HOH TIP . C 3 HOH A 64 261 64 HOH TIP . C 3 HOH A 65 262 65 HOH TIP . C 3 HOH A 66 263 66 HOH TIP . C 3 HOH A 67 264 67 HOH TIP . C 3 HOH A 68 265 68 HOH TIP . C 3 HOH A 69 266 69 HOH TIP . C 3 HOH A 70 267 70 HOH TIP . C 3 HOH A 71 268 71 HOH TIP . C 3 HOH A 72 269 72 HOH TIP . C 3 HOH A 73 270 73 HOH TIP . C 3 HOH A 74 271 74 HOH TIP . C 3 HOH A 75 272 75 HOH TIP . C 3 HOH A 76 273 76 HOH TIP . C 3 HOH A 77 274 77 HOH TIP . C 3 HOH A 78 275 78 HOH TIP . C 3 HOH A 79 276 79 HOH TIP . C 3 HOH A 80 277 81 HOH TIP . C 3 HOH A 81 278 82 HOH TIP . C 3 HOH A 82 279 83 HOH TIP . C 3 HOH A 83 280 84 HOH TIP . C 3 HOH A 84 281 85 HOH TIP . C 3 HOH A 85 282 86 HOH TIP . C 3 HOH A 86 283 87 HOH TIP . C 3 HOH A 87 284 88 HOH TIP . C 3 HOH A 88 285 89 HOH TIP . C 3 HOH A 89 286 90 HOH TIP . C 3 HOH A 90 287 91 HOH TIP . C 3 HOH A 91 288 92 HOH TIP . C 3 HOH A 92 289 93 HOH TIP . C 3 HOH A 93 290 94 HOH TIP . C 3 HOH A 94 291 95 HOH TIP . C 3 HOH A 95 292 96 HOH TIP . C 3 HOH A 96 293 97 HOH TIP . C 3 HOH A 97 294 98 HOH TIP . C 3 HOH A 98 295 99 HOH TIP . C 3 HOH A 99 296 100 HOH TIP . C 3 HOH A 100 297 101 HOH TIP . C 3 HOH A 101 298 102 HOH TIP . C 3 HOH A 102 299 103 HOH TIP . C 3 HOH A 103 300 104 HOH TIP . C 3 HOH A 104 301 105 HOH TIP . C 3 HOH A 105 302 106 HOH TIP . C 3 HOH A 106 303 107 HOH TIP . C 3 HOH A 107 304 108 HOH TIP . C 3 HOH A 108 305 109 HOH TIP . C 3 HOH A 109 306 110 HOH TIP . C 3 HOH A 110 307 111 HOH TIP . C 3 HOH A 111 308 112 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 CZH . . . B 2 24.075 -5.882 49.097 1 15.25 ? N1 CZH 197 A 1 HETATM 2 C C2 CZH . . . B 2 23.927 -7.296 48.942 1 16.77 ? C2 CZH 197 A 1 HETATM 3 C C3 CZH . . . B 2 23.812 -7.774 50.447 1 17.09 ? C3 CZH 197 A 1 HETATM 4 N N4 CZH . . . B 2 23.898 -6.725 51.21 1 17.26 ? N4 CZH 197 A 1 HETATM 5 C C5 CZH . . . B 2 23.842 -6.695 52.697 1 16.83 ? C5 CZH 197 A 1 HETATM 6 C C6 CZH . . . B 2 23.964 -5.46 53.295 1 15.58 ? C6 CZH 197 A 1 HETATM 7 N N7 CZH . . . B 2 24.146 -4.258 52.416 1 13.65 ? N7 CZH 197 A 1 HETATM 8 C C8 CZH . . . B 2 24.191 -4.315 51.07 1 12.94 ? C8 CZH 197 A 1 HETATM 9 C C9 CZH . . . B 2 24.054 -5.647 50.397 1 16 ? C9 CZH 197 A 1 HETATM 10 C C10 CZH . . . B 2 22.646 -7.625 48.088 1 18.7 ? C10 CZH 197 A 1 HETATM 11 C C11 CZH . . . B 2 22.456 -9.109 47.849 1 17.64 ? C11 CZH 197 A 1 HETATM 12 C C12 CZH . . . B 2 23.24 -9.81 46.821 1 18.85 ? C12 CZH 197 A 1 HETATM 13 C C13 CZH . . . B 2 23.061 -11.219 46.602 1 17.71 ? C13 CZH 197 A 1 HETATM 14 C C14 CZH . . . B 2 22.105 -11.949 47.401 1 17.89 ? C14 CZH 197 A 1 HETATM 15 C C15 CZH . . . B 2 21.317 -11.275 48.427 1 17.98 ? C15 CZH 197 A 1 HETATM 16 C C16 CZH . . . B 2 21.498 -9.852 48.644 1 18.56 ? C16 CZH 197 A 1 HETATM 17 O O17 CZH . . . B 2 21.965 -13.269 47.167 1 17.06 ? O17 CZH 197 A 1 HETATM 18 O O18 CZH . . . B 2 23.674 -8.934 50.807 1 20.06 ? O18 CZH 197 A 1 HETATM 19 C C19 CZH . . . B 2 23.936 -5.234 54.744 1 15.51 ? C19 CZH 197 A 1 HETATM 20 C C20 CZH . . . B 2 23.527 -3.937 55.248 1 17.46 ? C20 CZH 197 A 1 HETATM 21 C C21 CZH . . . B 2 23.506 -3.702 56.674 1 15.03 ? C21 CZH 197 A 1 HETATM 22 C C22 CZH . . . B 2 23.891 -4.755 57.587 1 15.98 ? C22 CZH 197 A 1 HETATM 23 C C23 CZH . . . B 2 24.295 -6.037 57.092 1 15.34 ? C23 CZH 197 A 1 HETATM 24 C C24 CZH . . . B 2 24.319 -6.276 55.694 1 15.35 ? C24 CZH 197 A 1 HETATM 25 O O25 CZH . . . B 2 23.872 -4.521 58.917 1 18.35 ? O25 CZH 197 A 1 HETATM 26 C C26 CZH . . . B 2 24.379 -3.023 50.315 1 14.33 ? C26 CZH 197 A 1 HETATM 27 C C27 CZH . . . B 2 23.111 -2.239 50.154 1 15.13 ? C27 CZH 197 A 1 HETATM 28 C C28 CZH . . . B 2 22.539 -2.081 48.832 1 17.77 ? C28 CZH 197 A 1 HETATM 29 C C29 CZH . . . B 2 21.31 -1.317 48.648 1 17.52 ? C29 CZH 197 A 1 HETATM 30 C C30 CZH . . . B 2 20.655 -0.714 49.784 1 16.25 ? C30 CZH 197 A 1 HETATM 31 C C31 CZH . . . B 2 21.218 -0.871 51.113 1 16.4 ? C31 CZH 197 A 1 HETATM 32 C C32 CZH . . . B 2 22.442 -1.629 51.303 1 18.23 ? C32 CZH 197 A 1 HETATM 33 O O33 CZH . . . B 2 25.13 -7.638 48.215 1 20.45 ? O33 CZH 197 A 1 HETATM 34 O O34 CZH . . . B 2 26.097 -8.338 48.958 1 16.77 ? O34 CZH 197 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 34 #