data_1JH9 # _model_server_result.job_id Hqn3vd1b7l5VfxMg_RP--Q _model_server_result.datetime_utc '2024-10-24 04:26:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jh9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":599}' # _entry.id 1JH9 # _exptl.entry_id 1JH9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 136.111 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HYPOXANTHINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JH9 _cell.length_a 175.38 _cell.length_b 92.61 _cell.length_c 80.64 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JH9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog 'DA-DT PAIR' hydrog1 A N1 DA 2 B DA 700 1_555 A N3 DT 17 B DT 715 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog2 A N3 DC 3 B DC 701 1_555 A N1 DG 16 B DG 714 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog3 A N4 DC 3 B DC 701 1_555 A O6 DG 16 B DG 714 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog4 A O2 DC 3 B DC 701 1_555 A N2 DG 16 B DG 714 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog5 A N1 DG 4 B DG 702 1_555 A N3 DC 15 B DC 713 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog6 A N2 DG 4 B DG 702 1_555 A O2 DC 15 B DC 713 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog7 A O6 DG 4 B DG 702 1_555 A N4 DC 15 B DC 713 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog8 A N1 DA 5 B DA 703 1_555 A N3 DT 14 B DT 712 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog9 A N6 DA 5 B DA 703 1_555 A O4 DT 14 B DT 712 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog10 A N1 DA 6 B DA 704 1_555 A N3 DT 13 B DT 711 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog11 A N6 DA 6 B DA 704 1_555 A O4 DT 13 B DT 711 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog12 A N1 DA 7 B DA 705 1_555 A N3 DT 12 B DT 710 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog13 A N6 DA 7 B DA 705 1_555 A O4 DT 12 B DT 710 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog14 A N1 DA 8 B DA 706 1_555 A N3 DT 11 B DT 709 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog15 A N6 DA 8 B DA 706 1_555 A O4 DT 11 B DT 709 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog16 A N3 DC 9 B DC 707 1_555 A N1 DG 10 B DG 708 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog17 A N4 DC 9 B DC 707 1_555 A O6 DG 10 B DG 708 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog18 A O2 DC 9 B DC 707 1_555 A N2 DG 10 B DG 708 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog19 A N1 DG 10 B DG 708 1_555 A N3 DC 9 B DC 707 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog20 A N2 DG 10 B DG 708 1_555 A O2 DC 9 B DC 707 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog21 A O6 DG 10 B DG 708 1_555 A N4 DC 9 B DC 707 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog22 A N3 DT 11 B DT 709 1_555 A N1 DA 8 B DA 706 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog23 A O4 DT 11 B DT 709 1_555 A N6 DA 8 B DA 706 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog24 A N3 DT 12 B DT 710 1_555 A N1 DA 7 B DA 705 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog25 A O4 DT 12 B DT 710 1_555 A N6 DA 7 B DA 705 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog26 A N3 DT 13 B DT 711 1_555 A N1 DA 6 B DA 704 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog27 A O4 DT 13 B DT 711 1_555 A N6 DA 6 B DA 704 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog28 A N3 DT 14 B DT 712 1_555 A N1 DA 5 B DA 703 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog29 A O4 DT 14 B DT 712 1_555 A N6 DA 5 B DA 703 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog30 A N3 DC 15 B DC 713 1_555 A N1 DG 4 B DG 702 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog31 A N4 DC 15 B DC 713 1_555 A O6 DG 4 B DG 702 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog32 A O2 DC 15 B DC 713 1_555 A N2 DG 4 B DG 702 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog33 A N1 DG 16 B DG 714 1_555 A N3 DC 3 B DC 701 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog34 A N2 DG 16 B DG 714 1_555 A O2 DC 3 B DC 701 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog WATSON-CRICK hydrog35 A O6 DG 16 B DG 714 1_555 A N4 DC 3 B DC 701 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? hydrog 'DT-DA PAIR' hydrog36 A N3 DT 17 B DT 715 1_555 A N1 DA 2 B DA 700 4_555 ? ? ? ? ? ? ? ? ? ? ? ? ? ? # _chem_comp.formula 'C5 H4 N4 O' _chem_comp.formula_weight 136.111 _chem_comp.id HPA _chem_comp.mon_nstd_flag . _chem_comp.name HYPOXANTHINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 HPA sing 301 n y N1 C6 HPA sing 302 n y N1 HN1 HPA sing 303 n n C2 N3 HPA doub 304 n y C2 H2 HPA sing 305 n n N3 C4 HPA sing 306 n y C4 C5 HPA doub 307 n y C4 N9 HPA sing 308 n y C5 C6 HPA sing 309 n y C5 N7 HPA sing 310 n y C6 O6 HPA doub 311 n n N7 C8 HPA sing 312 n y N7 HN7 HPA sing 313 n n C8 N9 HPA doub 314 n y C8 H8 HPA sing 315 n n # _atom_sites.entry_id 1JH9 _atom_sites.fract_transf_matrix[1][1] 0.005702 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010798 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012401 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 799 799 PO4 PO4 . D 3 PO4 A 1 800 800 PO4 PO4 . E 4 HPA A 1 599 599 HPA HPA . F 5 HOH B 1 2 2 HOH HOH . F 5 HOH B 2 7 7 HOH HOH . F 5 HOH B 3 23 23 HOH HOH . F 5 HOH B 4 26 26 HOH HOH . F 5 HOH B 5 42 42 HOH HOH . F 5 HOH B 6 65 65 HOH HOH . F 5 HOH B 7 70 70 HOH HOH . F 5 HOH B 8 86 86 HOH HOH . F 5 HOH B 9 97 97 HOH HOH . G 5 HOH A 1 801 1 HOH HOH . G 5 HOH A 2 802 4 HOH HOH . G 5 HOH A 3 803 5 HOH HOH . G 5 HOH A 4 804 6 HOH HOH . G 5 HOH A 5 805 8 HOH HOH . G 5 HOH A 6 806 9 HOH HOH . G 5 HOH A 7 807 10 HOH HOH . G 5 HOH A 8 808 11 HOH HOH . G 5 HOH A 9 809 12 HOH HOH . G 5 HOH A 10 810 13 HOH HOH . G 5 HOH A 11 811 14 HOH HOH . G 5 HOH A 12 812 15 HOH HOH . G 5 HOH A 13 813 16 HOH HOH . G 5 HOH A 14 814 17 HOH HOH . G 5 HOH A 15 815 18 HOH HOH . G 5 HOH A 16 816 19 HOH HOH . G 5 HOH A 17 817 20 HOH HOH . G 5 HOH A 18 818 21 HOH HOH . G 5 HOH A 19 819 22 HOH HOH . G 5 HOH A 20 820 24 HOH HOH . G 5 HOH A 21 821 25 HOH HOH . G 5 HOH A 22 822 27 HOH HOH . G 5 HOH A 23 823 28 HOH HOH . G 5 HOH A 24 824 29 HOH HOH . G 5 HOH A 25 825 30 HOH HOH . G 5 HOH A 26 826 31 HOH HOH . G 5 HOH A 27 827 32 HOH HOH . G 5 HOH A 28 828 33 HOH HOH . G 5 HOH A 29 829 34 HOH HOH . G 5 HOH A 30 830 35 HOH HOH . G 5 HOH A 31 831 36 HOH HOH . G 5 HOH A 32 832 37 HOH HOH . G 5 HOH A 33 833 38 HOH HOH . G 5 HOH A 34 834 39 HOH HOH . G 5 HOH A 35 835 40 HOH HOH . G 5 HOH A 36 836 41 HOH HOH . G 5 HOH A 37 837 43 HOH HOH . G 5 HOH A 38 838 44 HOH HOH . G 5 HOH A 39 839 45 HOH HOH . G 5 HOH A 40 840 48 HOH HOH . G 5 HOH A 41 841 49 HOH HOH . G 5 HOH A 42 842 50 HOH HOH . G 5 HOH A 43 843 51 HOH HOH . G 5 HOH A 44 844 52 HOH HOH . G 5 HOH A 45 845 53 HOH HOH . G 5 HOH A 46 846 54 HOH HOH . G 5 HOH A 47 847 55 HOH HOH . G 5 HOH A 48 848 56 HOH HOH . G 5 HOH A 49 849 57 HOH HOH . G 5 HOH A 50 850 58 HOH HOH . G 5 HOH A 51 851 59 HOH HOH . G 5 HOH A 52 852 60 HOH HOH . G 5 HOH A 53 853 61 HOH HOH . G 5 HOH A 54 854 62 HOH HOH . G 5 HOH A 55 855 63 HOH HOH . G 5 HOH A 56 856 64 HOH HOH . G 5 HOH A 57 857 66 HOH HOH . G 5 HOH A 58 858 67 HOH HOH . G 5 HOH A 59 859 68 HOH HOH . G 5 HOH A 60 860 69 HOH HOH . G 5 HOH A 61 861 71 HOH HOH . G 5 HOH A 62 862 72 HOH HOH . G 5 HOH A 63 863 73 HOH HOH . G 5 HOH A 64 864 74 HOH HOH . G 5 HOH A 65 865 75 HOH HOH . G 5 HOH A 66 866 76 HOH HOH . G 5 HOH A 67 867 77 HOH HOH . G 5 HOH A 68 868 79 HOH HOH . G 5 HOH A 69 869 80 HOH HOH . G 5 HOH A 70 870 81 HOH HOH . G 5 HOH A 71 871 82 HOH HOH . G 5 HOH A 72 872 83 HOH HOH . G 5 HOH A 73 873 84 HOH HOH . G 5 HOH A 74 874 87 HOH HOH . G 5 HOH A 75 875 88 HOH HOH . G 5 HOH A 76 876 89 HOH HOH . G 5 HOH A 77 877 90 HOH HOH . G 5 HOH A 78 878 91 HOH HOH . G 5 HOH A 79 879 92 HOH HOH . G 5 HOH A 80 880 94 HOH HOH . G 5 HOH A 81 881 95 HOH HOH . G 5 HOH A 82 882 96 HOH HOH . G 5 HOH A 83 883 98 HOH HOH . G 5 HOH A 84 884 99 HOH HOH . G 5 HOH A 85 885 100 HOH HOH . G 5 HOH A 86 886 101 HOH HOH . G 5 HOH A 87 887 102 HOH HOH . G 5 HOH A 88 888 103 HOH HOH . G 5 HOH A 89 889 104 HOH HOH . G 5 HOH A 90 890 105 HOH HOH . G 5 HOH A 91 891 106 HOH HOH . G 5 HOH A 92 892 107 HOH HOH . G 5 HOH A 93 893 108 HOH HOH . G 5 HOH A 94 894 109 HOH HOH . G 5 HOH A 95 895 110 HOH HOH . G 5 HOH A 96 896 112 HOH HOH . G 5 HOH A 97 897 113 HOH HOH . G 5 HOH A 98 898 114 HOH HOH . G 5 HOH A 99 899 115 HOH HOH . G 5 HOH A 100 900 116 HOH HOH . G 5 HOH A 101 901 117 HOH HOH . G 5 HOH A 102 902 118 HOH HOH . G 5 HOH A 103 903 119 HOH HOH . G 5 HOH A 104 904 120 HOH HOH . G 5 HOH A 105 905 121 HOH HOH . G 5 HOH A 106 906 122 HOH HOH . G 5 HOH A 107 907 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 HPA . . . E 4 118.71 2.602 10.683 1 40.34 ? N1 HPA 599 A 1 HETATM 2 C C2 HPA . . . E 4 117.911 2.701 9.566 1 35.86 ? C2 HPA 599 A 1 HETATM 3 N N3 HPA . . . E 4 117.263 3.809 9.219 1 53.3 ? N3 HPA 599 A 1 HETATM 4 C C4 HPA . . . E 4 117.454 4.815 10.11 1 45.42 ? C4 HPA 599 A 1 HETATM 5 C C5 HPA . . . E 4 118.236 4.811 11.246 1 65.81 ? C5 HPA 599 A 1 HETATM 6 C C6 HPA . . . E 4 118.945 3.632 11.593 1 51.31 ? C6 HPA 599 A 1 HETATM 7 O O6 HPA . . . E 4 119.697 3.433 12.561 1 53.1 ? O6 HPA 599 A 1 HETATM 8 N N7 HPA . . . E 4 118.171 6.051 11.876 1 43.36 ? N7 HPA 599 A 1 HETATM 9 C C8 HPA . . . E 4 117.381 6.768 11.126 1 55.74 ? C8 HPA 599 A 1 HETATM 10 N N9 HPA . . . E 4 116.907 6.08 10.033 1 42.86 ? N9 HPA 599 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #