data_1JHA # _model_server_result.job_id jsAyfgNknruDCFhgHr7qzg _model_server_result.datetime_utc '2024-11-25 09:25:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jha # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":990}' # _entry.id 1JHA # _exptl.entry_id 1JHA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.221 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ALPHA-ADENOSINE MONOPHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JHA _cell.length_a 71.64 _cell.length_b 89.92 _cell.length_c 47.63 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JHA _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 71.64 89.92 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 160 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 160 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 256 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 256 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.538 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H14 N5 O7 P' _chem_comp.formula_weight 347.221 _chem_comp.id AAM _chem_comp.mon_nstd_flag . _chem_comp.name 'ALPHA-ADENOSINE MONOPHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8A N9A AAM doub 1 n y C8A N7A AAM sing 2 n y C8A H8A AAM sing 3 n n N9A C4A AAM sing 4 n y C4A C5A AAM doub 5 n y C4A N3A AAM sing 6 n y C5A N7A AAM sing 7 n y C5A C6A AAM sing 8 n y N7A C1' AAM sing 9 n n N3A C2A AAM doub 10 n y C2A N1A AAM sing 11 n y C2A H2A AAM sing 12 n n N1A C6A AAM doub 13 n y C6A N6A AAM sing 14 n n N6A HN61 AAM sing 15 n n N6A HN62 AAM sing 16 n n P O1P AAM doub 17 n n P O2P AAM sing 18 n n P O3P AAM sing 19 n n P O6' AAM sing 20 n n O2P HOP2 AAM sing 21 n n O3P HOP3 AAM sing 22 n n O6' C5' AAM sing 23 n n C5' C4' AAM sing 24 n n C5' "H5'1" AAM sing 25 n n C5' "H5'2" AAM sing 26 n n C4' O5' AAM sing 27 n n C4' C3' AAM sing 28 n n C4' H4' AAM sing 29 n n O5' C1' AAM sing 30 n n C3' O3' AAM sing 31 n n C3' C2' AAM sing 32 n n C3' H3' AAM sing 33 n n O3' HO3' AAM sing 34 n n C2' O2' AAM sing 35 n n C2' C1' AAM sing 36 n n C2' H2' AAM sing 37 n n O2' HO2' AAM sing 38 n n C1' H1' AAM sing 39 n n # _atom_sites.entry_id 1JHA _atom_sites.fract_transf_matrix[1][1] 0.013959 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011121 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020995 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AAM A 1 990 990 AAM AMP . C 3 NIO A 1 991 991 NIO NIC . D 4 HOH A 1 1001 1001 HOH WAT . D 4 HOH A 2 1002 1002 HOH WAT . D 4 HOH A 3 1003 1003 HOH WAT . D 4 HOH A 4 1004 1004 HOH WAT . D 4 HOH A 5 1005 1005 HOH WAT . D 4 HOH A 6 1006 1006 HOH WAT . D 4 HOH A 7 1007 1007 HOH WAT . D 4 HOH A 8 1008 1008 HOH WAT . D 4 HOH A 9 1009 1009 HOH WAT . D 4 HOH A 10 1010 1010 HOH WAT . D 4 HOH A 11 1011 1011 HOH WAT . D 4 HOH A 12 1012 1012 HOH WAT . D 4 HOH A 13 1013 1013 HOH WAT . D 4 HOH A 14 1014 1014 HOH WAT . D 4 HOH A 15 1015 1015 HOH WAT . D 4 HOH A 16 1016 1016 HOH WAT . D 4 HOH A 17 1017 1017 HOH WAT . D 4 HOH A 18 1018 1018 HOH WAT . D 4 HOH A 19 1019 1019 HOH WAT . D 4 HOH A 20 1021 1021 HOH WAT . D 4 HOH A 21 1022 1022 HOH WAT . D 4 HOH A 22 1023 1023 HOH WAT . D 4 HOH A 23 1024 1024 HOH WAT . D 4 HOH A 24 1025 1025 HOH WAT . D 4 HOH A 25 1026 1026 HOH WAT . D 4 HOH A 26 1027 1027 HOH WAT . D 4 HOH A 27 1028 1028 HOH WAT . D 4 HOH A 28 1029 1029 HOH WAT . D 4 HOH A 29 1030 1030 HOH WAT . D 4 HOH A 30 1031 1031 HOH WAT . D 4 HOH A 31 1032 1032 HOH WAT . D 4 HOH A 32 1034 1034 HOH WAT . D 4 HOH A 33 1035 1035 HOH WAT . D 4 HOH A 34 1036 1036 HOH WAT . D 4 HOH A 35 1037 1037 HOH WAT . D 4 HOH A 36 1038 1038 HOH WAT . D 4 HOH A 37 1039 1039 HOH WAT . D 4 HOH A 38 1040 1040 HOH WAT . D 4 HOH A 39 1041 1041 HOH WAT . D 4 HOH A 40 1042 1042 HOH WAT . D 4 HOH A 41 1043 1043 HOH WAT . D 4 HOH A 42 1045 1045 HOH WAT . D 4 HOH A 43 1046 1046 HOH WAT . D 4 HOH A 44 1047 1047 HOH WAT . D 4 HOH A 45 1048 1048 HOH WAT . D 4 HOH A 46 1049 1049 HOH WAT . D 4 HOH A 47 1050 1050 HOH WAT . D 4 HOH A 48 1051 1051 HOH WAT . D 4 HOH A 49 1052 1052 HOH WAT . D 4 HOH A 50 1053 1053 HOH WAT . D 4 HOH A 51 1054 1054 HOH WAT . D 4 HOH A 52 1055 1055 HOH WAT . D 4 HOH A 53 1056 1056 HOH WAT . D 4 HOH A 54 1057 1057 HOH WAT . D 4 HOH A 55 1058 1058 HOH WAT . D 4 HOH A 56 1060 1060 HOH WAT . D 4 HOH A 57 1061 1061 HOH WAT . D 4 HOH A 58 1062 1062 HOH WAT . D 4 HOH A 59 1063 1063 HOH WAT . D 4 HOH A 60 1064 1064 HOH WAT . D 4 HOH A 61 1065 1065 HOH WAT . D 4 HOH A 62 1066 1066 HOH WAT . D 4 HOH A 63 1067 1067 HOH WAT . D 4 HOH A 64 1068 1068 HOH WAT . D 4 HOH A 65 1069 1069 HOH WAT . D 4 HOH A 66 1070 1070 HOH WAT . D 4 HOH A 67 1071 1071 HOH WAT . D 4 HOH A 68 1072 1072 HOH WAT . D 4 HOH A 69 1073 1073 HOH WAT . D 4 HOH A 70 1074 1074 HOH WAT . D 4 HOH A 71 1075 1075 HOH WAT . D 4 HOH A 72 1076 1076 HOH WAT . D 4 HOH A 73 1077 1077 HOH WAT . D 4 HOH A 74 1078 1078 HOH WAT . D 4 HOH A 75 1079 1079 HOH WAT . D 4 HOH A 76 1080 1080 HOH WAT . D 4 HOH A 77 1081 1081 HOH WAT . D 4 HOH A 78 1082 1082 HOH WAT . D 4 HOH A 79 1083 1083 HOH WAT . D 4 HOH A 80 1084 1084 HOH WAT . D 4 HOH A 81 1085 1085 HOH WAT . D 4 HOH A 82 1086 1086 HOH WAT . D 4 HOH A 83 1087 1087 HOH WAT . D 4 HOH A 84 1088 1088 HOH WAT . D 4 HOH A 85 1089 1089 HOH WAT . D 4 HOH A 86 1090 1090 HOH WAT . D 4 HOH A 87 1091 1091 HOH WAT . D 4 HOH A 88 1092 1092 HOH WAT . D 4 HOH A 89 1093 1093 HOH WAT . D 4 HOH A 90 1094 1094 HOH WAT . D 4 HOH A 91 1095 1095 HOH WAT . D 4 HOH A 92 1096 1096 HOH WAT . D 4 HOH A 93 1097 1097 HOH WAT . D 4 HOH A 94 1098 1098 HOH WAT . D 4 HOH A 95 1099 1099 HOH WAT . D 4 HOH A 96 1100 1100 HOH WAT . D 4 HOH A 97 1101 1101 HOH WAT . D 4 HOH A 98 1102 1102 HOH WAT . D 4 HOH A 99 1103 1103 HOH WAT . D 4 HOH A 100 1104 1104 HOH WAT . D 4 HOH A 101 1105 1105 HOH WAT . D 4 HOH A 102 1106 1106 HOH WAT . D 4 HOH A 103 1107 1107 HOH WAT . D 4 HOH A 104 1108 1108 HOH WAT . D 4 HOH A 105 1109 1109 HOH WAT . D 4 HOH A 106 1110 1110 HOH WAT . D 4 HOH A 107 1111 1111 HOH WAT . D 4 HOH A 108 1112 1112 HOH WAT . D 4 HOH A 109 1113 1113 HOH WAT . D 4 HOH A 110 1114 1114 HOH WAT . D 4 HOH A 111 1115 1115 HOH WAT . D 4 HOH A 112 1116 1116 HOH WAT . D 4 HOH A 113 1117 1117 HOH WAT . D 4 HOH A 114 1118 1118 HOH WAT . D 4 HOH A 115 1119 1119 HOH WAT . D 4 HOH A 116 1120 1120 HOH WAT . D 4 HOH A 117 1121 1121 HOH WAT . D 4 HOH A 118 1122 1122 HOH WAT . D 4 HOH A 119 1123 1123 HOH WAT . D 4 HOH A 120 1124 1124 HOH WAT . D 4 HOH A 121 1125 1125 HOH WAT . D 4 HOH A 122 1126 1126 HOH WAT . D 4 HOH A 123 1127 1127 HOH WAT . D 4 HOH A 124 1128 1128 HOH WAT . D 4 HOH A 125 1129 1129 HOH WAT . D 4 HOH A 126 1130 1130 HOH WAT . D 4 HOH A 127 1131 1131 HOH WAT . D 4 HOH A 128 1132 1132 HOH WAT . D 4 HOH A 129 1133 1133 HOH WAT . D 4 HOH A 130 1134 1134 HOH WAT . D 4 HOH A 131 1135 1135 HOH WAT . D 4 HOH A 132 1136 1136 HOH WAT . D 4 HOH A 133 1201 1201 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C8A AAM . . . B 2 55.916 40.767 12.974 1 17.43 ? C8A AAM 990 A 1 HETATM 2 N N9A AAM . . . B 2 56.248 41.47 14.079 1 10.74 ? N9A AAM 990 A 1 HETATM 3 C C4A AAM . . . B 2 57.433 42.106 13.783 1 19.69 ? C4A AAM 990 A 1 HETATM 4 C C5A AAM . . . B 2 57.774 41.721 12.488 1 14.8 ? C5A AAM 990 A 1 HETATM 5 N N7A AAM . . . B 2 56.773 40.893 11.941 1 15.16 ? N7A AAM 990 A 1 HETATM 6 N N3A AAM . . . B 2 58.139 42.902 14.62 1 16.89 ? N3A AAM 990 A 1 HETATM 7 C C2A AAM . . . B 2 59.264 43.349 14.027 1 18.65 ? C2A AAM 990 A 1 HETATM 8 N N1A AAM . . . B 2 59.705 43.09 12.753 1 11.35 ? N1A AAM 990 A 1 HETATM 9 C C6A AAM . . . B 2 58.992 42.258 11.95 1 19.23 ? C6A AAM 990 A 1 HETATM 10 N N6A AAM . . . B 2 59.529 42.031 10.644 1 15.16 ? N6A AAM 990 A 1 HETATM 11 P P AAM . . . B 2 59.42 39.283 6.05 1 18.44 ? P AAM 990 A 1 HETATM 12 O O1P AAM . . . B 2 59.157 38.042 5.248 1 13.86 ? O1P AAM 990 A 1 HETATM 13 O O2P AAM . . . B 2 59.557 40.445 5.126 1 13.25 ? O2P AAM 990 A 1 HETATM 14 O O3P AAM . . . B 2 60.672 39.123 6.828 1 15.92 ? O3P AAM 990 A 1 HETATM 15 O O6' AAM . . . B 2 58.246 39.561 7.102 1 21.27 ? O6' AAM 990 A 1 HETATM 16 C C5' AAM . . . B 2 57.672 38.518 7.892 1 28.73 ? C5' AAM 990 A 1 HETATM 17 C C4' AAM . . . B 2 57.983 38.82 9.326 1 19.36 ? C4' AAM 990 A 1 HETATM 18 O O5' AAM . . . B 2 57.706 40.206 9.65 1 33.55 ? O5' AAM 990 A 1 HETATM 19 C C3' AAM . . . B 2 57.238 38.031 10.356 1 45.56 ? C3' AAM 990 A 1 HETATM 20 O O3' AAM . . . B 2 57.918 38.032 11.611 1 32.68 ? O3' AAM 990 A 1 HETATM 21 C C2' AAM . . . B 2 56 38.878 10.493 1 20.75 ? C2' AAM 990 A 1 HETATM 22 O O2' AAM . . . B 2 55.44 38.449 11.747 1 16.98 ? O2' AAM 990 A 1 HETATM 23 C C1' AAM . . . B 2 56.572 40.301 10.549 1 33.56 ? C1' AAM 990 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 23 #