data_1JHY # _model_server_result.job_id jRbDVQpPS_TCF2h0EEukKg _model_server_result.datetime_utc '2024-11-24 09:24:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jhy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":991}' # _entry.id 1JHY # _exptl.entry_id 1JHY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 123.109 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NICOTINIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JHY _cell.length_a 71.82 _cell.length_b 89.99 _cell.length_c 47.58 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JHY _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 71.82 89.99 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 160 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 160 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 256 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 256 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.499 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C6 H5 N O2' _chem_comp.formula_weight 123.109 _chem_comp.id NIO _chem_comp.mon_nstd_flag . _chem_comp.name 'NICOTINIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N C1 NIO doub 250 n y N C5 NIO sing 251 n y C1 C2 NIO sing 252 n y C1 H1 NIO sing 253 n n C2 C3 NIO doub 254 n y C2 C6 NIO sing 255 n n C3 C4 NIO sing 256 n y C3 H3 NIO sing 257 n n C4 C5 NIO doub 258 n y C4 H4 NIO sing 259 n n C5 H5 NIO sing 260 n n C6 O1 NIO doub 261 n n C6 O2 NIO sing 262 n n O2 HO2 NIO sing 263 n n # _atom_sites.entry_id 1JHY _atom_sites.fract_transf_matrix[1][1] 0.013924 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011112 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021017 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 992 992 PO4 PI . C 3 IPH A 1 990 990 IPH NOL . D 4 NIO A 1 991 991 NIO NIC . E 5 HOH A 1 1001 1001 HOH WAT . E 5 HOH A 2 1002 1002 HOH WAT . E 5 HOH A 3 1003 1003 HOH WAT . E 5 HOH A 4 1004 1004 HOH WAT . E 5 HOH A 5 1005 1005 HOH WAT . E 5 HOH A 6 1006 1006 HOH WAT . E 5 HOH A 7 1007 1007 HOH WAT . E 5 HOH A 8 1008 1008 HOH WAT . E 5 HOH A 9 1009 1009 HOH WAT . E 5 HOH A 10 1010 1010 HOH WAT . E 5 HOH A 11 1011 1011 HOH WAT . E 5 HOH A 12 1012 1012 HOH WAT . E 5 HOH A 13 1013 1013 HOH WAT . E 5 HOH A 14 1014 1014 HOH WAT . E 5 HOH A 15 1015 1015 HOH WAT . E 5 HOH A 16 1016 1016 HOH WAT . E 5 HOH A 17 1017 1017 HOH WAT . E 5 HOH A 18 1018 1018 HOH WAT . E 5 HOH A 19 1019 1019 HOH WAT . E 5 HOH A 20 1020 1020 HOH WAT . E 5 HOH A 21 1021 1021 HOH WAT . E 5 HOH A 22 1022 1022 HOH WAT . E 5 HOH A 23 1024 1024 HOH WAT . E 5 HOH A 24 1025 1025 HOH WAT . E 5 HOH A 25 1026 1026 HOH WAT . E 5 HOH A 26 1027 1027 HOH WAT . E 5 HOH A 27 1028 1028 HOH WAT . E 5 HOH A 28 1029 1029 HOH WAT . E 5 HOH A 29 1030 1030 HOH WAT . E 5 HOH A 30 1031 1031 HOH WAT . E 5 HOH A 31 1032 1032 HOH WAT . E 5 HOH A 32 1033 1033 HOH WAT . E 5 HOH A 33 1034 1034 HOH WAT . E 5 HOH A 34 1035 1035 HOH WAT . E 5 HOH A 35 1036 1036 HOH WAT . E 5 HOH A 36 1037 1037 HOH WAT . E 5 HOH A 37 1038 1038 HOH WAT . E 5 HOH A 38 1039 1039 HOH WAT . E 5 HOH A 39 1040 1040 HOH WAT . E 5 HOH A 40 1041 1041 HOH WAT . E 5 HOH A 41 1042 1042 HOH WAT . E 5 HOH A 42 1043 1043 HOH WAT . E 5 HOH A 43 1044 1044 HOH WAT . E 5 HOH A 44 1045 1045 HOH WAT . E 5 HOH A 45 1046 1046 HOH WAT . E 5 HOH A 46 1047 1047 HOH WAT . E 5 HOH A 47 1048 1048 HOH WAT . E 5 HOH A 48 1049 1049 HOH WAT . E 5 HOH A 49 1050 1050 HOH WAT . E 5 HOH A 50 1051 1051 HOH WAT . E 5 HOH A 51 1052 1052 HOH WAT . E 5 HOH A 52 1053 1053 HOH WAT . E 5 HOH A 53 1054 1054 HOH WAT . E 5 HOH A 54 1055 1055 HOH WAT . E 5 HOH A 55 1056 1056 HOH WAT . E 5 HOH A 56 1057 1057 HOH WAT . E 5 HOH A 57 1058 1058 HOH WAT . E 5 HOH A 58 1059 1059 HOH WAT . E 5 HOH A 59 1060 1060 HOH WAT . E 5 HOH A 60 1061 1061 HOH WAT . E 5 HOH A 61 1062 1062 HOH WAT . E 5 HOH A 62 1063 1063 HOH WAT . E 5 HOH A 63 1064 1064 HOH WAT . E 5 HOH A 64 1065 1065 HOH WAT . E 5 HOH A 65 1066 1066 HOH WAT . E 5 HOH A 66 1067 1067 HOH WAT . E 5 HOH A 67 1068 1068 HOH WAT . E 5 HOH A 68 1069 1069 HOH WAT . E 5 HOH A 69 1070 1070 HOH WAT . E 5 HOH A 70 1071 1071 HOH WAT . E 5 HOH A 71 1072 1072 HOH WAT . E 5 HOH A 72 1073 1073 HOH WAT . E 5 HOH A 73 1074 1074 HOH WAT . E 5 HOH A 74 1075 1075 HOH WAT . E 5 HOH A 75 1076 1076 HOH WAT . E 5 HOH A 76 1077 1077 HOH WAT . E 5 HOH A 77 1078 1078 HOH WAT . E 5 HOH A 78 1079 1079 HOH WAT . E 5 HOH A 79 1081 1081 HOH WAT . E 5 HOH A 80 1082 1082 HOH WAT . E 5 HOH A 81 1083 1083 HOH WAT . E 5 HOH A 82 1084 1084 HOH WAT . E 5 HOH A 83 1085 1085 HOH WAT . E 5 HOH A 84 1086 1086 HOH WAT . E 5 HOH A 85 1087 1087 HOH WAT . E 5 HOH A 86 1088 1088 HOH WAT . E 5 HOH A 87 1089 1089 HOH WAT . E 5 HOH A 88 1090 1090 HOH WAT . E 5 HOH A 89 1091 1091 HOH WAT . E 5 HOH A 90 1092 1092 HOH WAT . E 5 HOH A 91 1093 1093 HOH WAT . E 5 HOH A 92 1094 1094 HOH WAT . E 5 HOH A 93 1095 1095 HOH WAT . E 5 HOH A 94 1096 1096 HOH WAT . E 5 HOH A 95 1097 1097 HOH WAT . E 5 HOH A 96 1098 1098 HOH WAT . E 5 HOH A 97 1099 1099 HOH WAT . E 5 HOH A 98 1100 1100 HOH WAT . E 5 HOH A 99 1101 1101 HOH WAT . E 5 HOH A 100 1102 1102 HOH WAT . E 5 HOH A 101 1103 1103 HOH WAT . E 5 HOH A 102 1104 1104 HOH WAT . E 5 HOH A 103 1105 1105 HOH WAT . E 5 HOH A 104 1108 1108 HOH WAT . E 5 HOH A 105 1109 1109 HOH WAT . E 5 HOH A 106 1110 1110 HOH WAT . E 5 HOH A 107 1111 1111 HOH WAT . E 5 HOH A 108 1112 1112 HOH WAT . E 5 HOH A 109 1113 1113 HOH WAT . E 5 HOH A 110 1114 1114 HOH WAT . E 5 HOH A 111 1115 1115 HOH WAT . E 5 HOH A 112 1116 1116 HOH WAT . E 5 HOH A 113 1118 1118 HOH WAT . E 5 HOH A 114 1119 1119 HOH WAT . E 5 HOH A 115 1120 1120 HOH WAT . E 5 HOH A 116 1121 1121 HOH WAT . E 5 HOH A 117 1122 1122 HOH WAT . E 5 HOH A 118 1123 1123 HOH WAT . E 5 HOH A 119 1124 1124 HOH WAT . E 5 HOH A 120 1125 1125 HOH WAT . E 5 HOH A 121 1126 1126 HOH WAT . E 5 HOH A 122 1127 1127 HOH WAT . E 5 HOH A 123 1128 1128 HOH WAT . E 5 HOH A 124 1129 1129 HOH WAT . E 5 HOH A 125 1130 1130 HOH WAT . E 5 HOH A 126 1131 1131 HOH WAT . E 5 HOH A 127 1132 1132 HOH WAT . E 5 HOH A 128 1133 1133 HOH WAT . E 5 HOH A 129 1134 1134 HOH WAT . E 5 HOH A 130 1135 1135 HOH WAT . E 5 HOH A 131 1136 1136 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NIO . . . D 4 54.252 40.05 8.239 1 73.08 ? N NIO 991 A 1 HETATM 2 C C1 NIO . . . D 4 52.993 39.572 8.475 1 24.01 ? C1 NIO 991 A 1 HETATM 3 C C2 NIO . . . D 4 52.017 39.763 7.499 1 24.73 ? C2 NIO 991 A 1 HETATM 4 C C3 NIO . . . D 4 52.304 40.436 6.261 1 22.97 ? C3 NIO 991 A 1 HETATM 5 C C4 NIO . . . D 4 53.635 40.871 6.153 1 22.65 ? C4 NIO 991 A 1 HETATM 6 C C5 NIO . . . D 4 54.644 40.735 7.083 1 29.35 ? C5 NIO 991 A 1 HETATM 7 C C6 NIO . . . D 4 50.608 39.245 7.73 1 18.48 ? C6 NIO 991 A 1 HETATM 8 O O1 NIO . . . D 4 49.734 39.422 6.825 1 24.9 ? O1 NIO 991 A 1 HETATM 9 O O2 NIO . . . D 4 50.312 38.643 8.811 1 21.48 ? O2 NIO 991 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #