data_1JIP # _model_server_result.job_id np80P4MpFl2qp5jiD01faw _model_server_result.datetime_utc '2024-10-20 00:26:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jip # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":801}' # _entry.id 1JIP # _exptl.entry_id 1JIP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 531.431 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL)PIPERAZINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JIP _cell.length_a 54.23 _cell.length_b 80.49 _cell.length_c 99.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JIP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 350 A CYS 351 1_555 B FE HEM . A HEM 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc2 B FE HEM . A HEM 410 1_555 C N2 KTN . A KTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? # _chem_comp.formula 'C26 H28 Cl2 N4 O4' _chem_comp.formula_weight 531.431 _chem_comp.id KTN _chem_comp.mon_nstd_flag . _chem_comp.name CIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL)PIPERAZINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms KETOCONAZOLE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C1 KTN sing 255 n y N1 C3 KTN sing 256 n y N1 C4 KTN sing 257 n n C1 N2 KTN doub 258 n y C1 HC1 KTN sing 259 n n N2 C2 KTN sing 260 n y C2 C3 KTN doub 261 n y C2 HC2 KTN sing 262 n n C3 HC3 KTN sing 263 n n C4 C5 KTN sing 264 n n C4 HC41 KTN sing 265 n n C4 HC42 KTN sing 266 n n C5 O1 KTN sing 267 n n C5 O2 KTN sing 268 n n C5 C8 KTN sing 269 n n O1 C6 KTN sing 270 n n C6 C7 KTN sing 271 n n C6 C14 KTN sing 272 n n C6 HC6 KTN sing 273 n n C7 O2 KTN sing 274 n n C7 HC71 KTN sing 275 n n C7 HC72 KTN sing 276 n n C8 C9 KTN doub 277 n y C8 C13 KTN sing 278 n y C9 C10 KTN sing 279 n y C9 CL2 KTN sing 280 n n C10 C11 KTN doub 281 n y C10 H10 KTN sing 282 n n C11 C12 KTN sing 283 n y C11 CL1 KTN sing 284 n n C12 C13 KTN doub 285 n y C12 H12 KTN sing 286 n n C13 H13 KTN sing 287 n n C14 O3 KTN sing 288 n n C14 H141 KTN sing 289 n n C14 H142 KTN sing 290 n n O3 C15 KTN sing 291 n n C15 C16 KTN doub 292 n y C15 C20 KTN sing 293 n y C16 C17 KTN sing 294 n y C16 H16 KTN sing 295 n n C17 C18 KTN doub 296 n y C17 H17 KTN sing 297 n n C18 C19 KTN sing 298 n y C18 N3 KTN sing 299 n n C19 C20 KTN doub 300 n y C19 H19 KTN sing 301 n n C20 H20 KTN sing 302 n n N3 C21 KTN sing 303 n n N3 C24 KTN sing 304 n n C21 C22 KTN sing 305 n n C21 H211 KTN sing 306 n n C21 H212 KTN sing 307 n n C22 N4 KTN sing 308 n n C22 H221 KTN sing 309 n n C22 H222 KTN sing 310 n n N4 C23 KTN sing 311 n n N4 C25 KTN sing 312 n n C23 C24 KTN sing 313 n n C23 H231 KTN sing 314 n n C23 H232 KTN sing 315 n n C24 H241 KTN sing 316 n n C24 H242 KTN sing 317 n n C25 O4 KTN doub 318 n n C25 C26 KTN sing 319 n n C26 H261 KTN sing 320 n n C26 H262 KTN sing 321 n n C26 H263 KTN sing 322 n n # _atom_sites.entry_id 1JIP _atom_sites.fract_transf_matrix[1][1] 0.01844 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012424 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010028 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 410 410 HEM HEM . C 3 KTN A 1 801 801 KTN KET . D 4 HOH A 1 802 1 HOH TIP . D 4 HOH A 2 803 2 HOH TIP . D 4 HOH A 3 804 3 HOH TIP . D 4 HOH A 4 805 4 HOH TIP . D 4 HOH A 5 806 5 HOH TIP . D 4 HOH A 6 807 6 HOH TIP . D 4 HOH A 7 808 7 HOH TIP . D 4 HOH A 8 809 8 HOH TIP . D 4 HOH A 9 810 9 HOH TIP . D 4 HOH A 10 811 10 HOH TIP . D 4 HOH A 11 812 11 HOH TIP . D 4 HOH A 12 813 12 HOH TIP . D 4 HOH A 13 814 13 HOH TIP . D 4 HOH A 14 815 14 HOH TIP . D 4 HOH A 15 816 15 HOH TIP . D 4 HOH A 16 817 16 HOH TIP . D 4 HOH A 17 818 17 HOH TIP . D 4 HOH A 18 819 18 HOH TIP . D 4 HOH A 19 820 19 HOH TIP . D 4 HOH A 20 821 20 HOH TIP . D 4 HOH A 21 822 21 HOH TIP . D 4 HOH A 22 823 22 HOH TIP . D 4 HOH A 23 824 23 HOH TIP . D 4 HOH A 24 825 24 HOH TIP . D 4 HOH A 25 826 25 HOH TIP . D 4 HOH A 26 827 26 HOH TIP . D 4 HOH A 27 828 27 HOH TIP . D 4 HOH A 28 829 28 HOH TIP . D 4 HOH A 29 830 29 HOH TIP . D 4 HOH A 30 831 30 HOH TIP . D 4 HOH A 31 832 31 HOH TIP . D 4 HOH A 32 833 32 HOH TIP . D 4 HOH A 33 834 33 HOH TIP . D 4 HOH A 34 835 34 HOH TIP . D 4 HOH A 35 836 35 HOH TIP . D 4 HOH A 36 837 36 HOH TIP . D 4 HOH A 37 838 37 HOH TIP . D 4 HOH A 38 839 38 HOH TIP . D 4 HOH A 39 840 39 HOH TIP . D 4 HOH A 40 841 40 HOH TIP . D 4 HOH A 41 842 41 HOH TIP . D 4 HOH A 42 843 42 HOH TIP . D 4 HOH A 43 844 43 HOH TIP . D 4 HOH A 44 845 44 HOH TIP . D 4 HOH A 45 846 45 HOH TIP . D 4 HOH A 46 847 46 HOH TIP . D 4 HOH A 47 848 47 HOH TIP . D 4 HOH A 48 849 48 HOH TIP . D 4 HOH A 49 850 49 HOH TIP . D 4 HOH A 50 851 50 HOH TIP . D 4 HOH A 51 852 51 HOH TIP . D 4 HOH A 52 853 52 HOH TIP . D 4 HOH A 53 854 53 HOH TIP . D 4 HOH A 54 855 54 HOH TIP . D 4 HOH A 55 856 55 HOH TIP . D 4 HOH A 56 857 56 HOH TIP . D 4 HOH A 57 858 57 HOH TIP . D 4 HOH A 58 859 58 HOH TIP . D 4 HOH A 59 860 59 HOH TIP . D 4 HOH A 60 861 60 HOH TIP . D 4 HOH A 61 862 61 HOH TIP . D 4 HOH A 62 863 62 HOH TIP . D 4 HOH A 63 864 63 HOH TIP . D 4 HOH A 64 865 64 HOH TIP . D 4 HOH A 65 866 65 HOH TIP . D 4 HOH A 66 867 66 HOH TIP . D 4 HOH A 67 868 67 HOH TIP . D 4 HOH A 68 869 68 HOH TIP . D 4 HOH A 69 870 69 HOH TIP . D 4 HOH A 70 871 70 HOH TIP . D 4 HOH A 71 872 71 HOH TIP . D 4 HOH A 72 873 72 HOH TIP . D 4 HOH A 73 874 73 HOH TIP . D 4 HOH A 74 875 74 HOH TIP . D 4 HOH A 75 876 75 HOH TIP . D 4 HOH A 76 877 76 HOH TIP . D 4 HOH A 77 878 77 HOH TIP . D 4 HOH A 78 879 78 HOH TIP . D 4 HOH A 79 880 79 HOH TIP . D 4 HOH A 80 881 80 HOH TIP . D 4 HOH A 81 882 81 HOH TIP . D 4 HOH A 82 883 82 HOH TIP . D 4 HOH A 83 884 83 HOH TIP . D 4 HOH A 84 885 84 HOH TIP . D 4 HOH A 85 886 85 HOH TIP . D 4 HOH A 86 887 86 HOH TIP . D 4 HOH A 87 888 87 HOH TIP . D 4 HOH A 88 889 88 HOH TIP . D 4 HOH A 89 890 89 HOH TIP . D 4 HOH A 90 891 90 HOH TIP . D 4 HOH A 91 892 91 HOH TIP . D 4 HOH A 92 893 92 HOH TIP . D 4 HOH A 93 894 93 HOH TIP . D 4 HOH A 94 895 94 HOH TIP . D 4 HOH A 95 896 95 HOH TIP . D 4 HOH A 96 897 96 HOH TIP . D 4 HOH A 97 898 97 HOH TIP . D 4 HOH A 98 899 98 HOH TIP . D 4 HOH A 99 900 99 HOH TIP . D 4 HOH A 100 901 100 HOH TIP . D 4 HOH A 101 902 101 HOH TIP . D 4 HOH A 102 903 102 HOH TIP . D 4 HOH A 103 904 103 HOH TIP . D 4 HOH A 104 905 104 HOH TIP . D 4 HOH A 105 906 105 HOH TIP . D 4 HOH A 106 907 106 HOH TIP . D 4 HOH A 107 908 107 HOH TIP . D 4 HOH A 108 909 108 HOH TIP . D 4 HOH A 109 910 109 HOH TIP . D 4 HOH A 110 911 110 HOH TIP . D 4 HOH A 111 912 111 HOH TIP . D 4 HOH A 112 913 112 HOH TIP . D 4 HOH A 113 914 113 HOH TIP . D 4 HOH A 114 915 114 HOH TIP . D 4 HOH A 115 916 115 HOH TIP . D 4 HOH A 116 917 116 HOH TIP . D 4 HOH A 117 918 117 HOH TIP . D 4 HOH A 118 919 118 HOH TIP . D 4 HOH A 119 920 119 HOH TIP . D 4 HOH A 120 921 120 HOH TIP . D 4 HOH A 121 922 121 HOH TIP . D 4 HOH A 122 923 122 HOH TIP . D 4 HOH A 123 924 123 HOH TIP . D 4 HOH A 124 925 124 HOH TIP . D 4 HOH A 125 926 125 HOH TIP . D 4 HOH A 126 927 126 HOH TIP . D 4 HOH A 127 928 127 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 KTN . . . C 3 -10.78 9.619 12.588 1 29.15 ? N1 KTN 801 A 1 HETATM 2 C C1 KTN . . . C 3 -10.813 10.648 11.709 1 23.66 ? C1 KTN 801 A 1 HETATM 3 N N2 KTN . . . C 3 -9.595 10.959 11.249 1 24.89 ? N2 KTN 801 A 1 HETATM 4 C C2 KTN . . . C 3 -8.776 10.08 11.864 1 27.68 ? C2 KTN 801 A 1 HETATM 5 C C3 KTN . . . C 3 -9.451 9.251 12.681 1 30.42 ? C3 KTN 801 A 1 HETATM 6 C C4 KTN . . . C 3 -11.859 8.982 13.326 1 30.21 ? C4 KTN 801 A 1 HETATM 7 C C5 KTN . . . C 3 -12.003 9.575 14.74 1 36.33 ? C5 KTN 801 A 1 HETATM 8 O O1 KTN . . . C 3 -10.686 10.07 15.22 1 32.59 ? O1 KTN 801 A 1 HETATM 9 C C6 KTN . . . C 3 -10.914 11.698 15.387 1 41.54 ? C6 KTN 801 A 1 HETATM 10 C C7 KTN . . . C 3 -12.353 11.766 15.45 1 47.06 ? C7 KTN 801 A 1 HETATM 11 O O2 KTN . . . C 3 -12.829 10.649 14.573 1 40.6 ? O2 KTN 801 A 1 HETATM 12 C C8 KTN . . . C 3 -12.992 8.727 15.591 1 31.15 ? C8 KTN 801 A 1 HETATM 13 C C9 KTN . . . C 3 -12.781 7.466 16.116 1 34.3 ? C9 KTN 801 A 1 HETATM 14 C C10 KTN . . . C 3 -13.759 6.831 16.915 1 35.29 ? C10 KTN 801 A 1 HETATM 15 C C11 KTN . . . C 3 -14.977 7.552 17.143 1 40.93 ? C11 KTN 801 A 1 HETATM 16 C C12 KTN . . . C 3 -15.212 8.78 16.613 1 38.77 ? C12 KTN 801 A 1 HETATM 17 C C13 KTN . . . C 3 -14.269 9.335 15.874 1 37.36 ? C13 KTN 801 A 1 HETATM 18 CL CL1 KTN . . . C 3 -16.229 6.95 18.11 1 39.03 ? CL1 KTN 801 A 1 HETATM 19 C C14 KTN . . . C 3 -11.388 12.478 14.043 1 46.55 ? C14 KTN 801 A 1 HETATM 20 O O3 KTN . . . C 3 -12.173 13.57 14.719 1 53.48 ? O3 KTN 801 A 1 HETATM 21 C C15 KTN . . . C 3 -13.872 13.34 14.269 1 46.16 ? C15 KTN 801 A 1 HETATM 22 C C16 KTN . . . C 3 -14.328 13.758 13.04 1 47.39 ? C16 KTN 801 A 1 HETATM 23 C C17 KTN . . . C 3 -15.693 13.391 12.71 1 54.14 ? C17 KTN 801 A 1 HETATM 24 C C18 KTN . . . C 3 -16.506 12.691 13.665 1 56.15 ? C18 KTN 801 A 1 HETATM 25 C C19 KTN . . . C 3 -15.982 12.501 14.942 1 46.16 ? C19 KTN 801 A 1 HETATM 26 C C20 KTN . . . C 3 -14.69 12.894 15.294 1 42.65 ? C20 KTN 801 A 1 HETATM 27 N N3 KTN . . . C 3 -17.845 12.216 13.243 1 58.57 ? N3 KTN 801 A 1 HETATM 28 C C21 KTN . . . C 3 -18.8 13.195 12.598 1 55.69 ? C21 KTN 801 A 1 HETATM 29 C C22 KTN . . . C 3 -20.223 12.68 12.441 1 53.73 ? C22 KTN 801 A 1 HETATM 30 N N4 KTN . . . C 3 -20.846 12.189 13.492 1 60.53 ? N4 KTN 801 A 1 HETATM 31 C C23 KTN . . . C 3 -19.791 10.644 13.766 1 60.99 ? C23 KTN 801 A 1 HETATM 32 C C24 KTN . . . C 3 -18.414 10.818 13.105 1 63.59 ? C24 KTN 801 A 1 HETATM 33 C C25 KTN . . . C 3 -22.194 12.021 13.575 1 55.95 ? C25 KTN 801 A 1 HETATM 34 O O4 KTN . . . C 3 -22.685 10.939 13.882 1 59.21 ? O4 KTN 801 A 1 HETATM 35 C C26 KTN . . . C 3 -23.081 13.177 13.285 1 58.55 ? C26 KTN 801 A 1 HETATM 36 CL CL2 KTN . . . C 3 -11.296 6.633 15.818 1 34.61 ? CL2 KTN 801 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 36 #