data_1JKA
#
_model_server_result.job_id            SsuYmypysN0OUDTY40BHzA 
_model_server_result.datetime_utc      '2024-12-23 06:55:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1jka 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":132}' 
#
_entry.id    1JKA 
#
_exptl.entry_id    1JKA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.005 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NITRATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1JKA 
_cell.length_a            57.02 
_cell.length_b            60.91 
_cell.length_c            33.09 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1JKA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 128 A CYS 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 116 A CYS 116 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf3 A SG CYS 65 A CYS 65 1_555 A SG CYS 81 A CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? 
disulf ? disulf4 A SG CYS 77 A CYS 77 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
#
_chem_comp.formula           'N O3 -1' 
_chem_comp.formula_weight    62.005 
_chem_comp.id                NO3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NITRATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N O1 NO3 doub 237 n n 
N O2 NO3 sing 238 n n 
N O3 NO3 sing 239 n n 
#
_atom_sites.entry_id                     1JKA 
_atom_sites.fract_transf_matrix[1][1]    0.017538 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016418 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.030221 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NO3 A 1 131 1 NO3 NO3 . 
C 2 NO3 A 1 132 2 NO3 NO3 . 
D 3 HOH A 1 133 1 HOH HOH . 
D 3 HOH A 2 134 2 HOH HOH . 
D 3 HOH A 3 135 3 HOH HOH . 
D 3 HOH A 4 136 4 HOH HOH . 
D 3 HOH A 5 137 5 HOH HOH . 
D 3 HOH A 6 138 6 HOH HOH . 
D 3 HOH A 7 139 7 HOH HOH . 
D 3 HOH A 8 140 8 HOH HOH . 
D 3 HOH A 9 141 9 HOH HOH . 
D 3 HOH A 10 142 10 HOH HOH . 
D 3 HOH A 11 143 11 HOH HOH . 
D 3 HOH A 12 144 12 HOH HOH . 
D 3 HOH A 13 145 13 HOH HOH . 
D 3 HOH A 14 146 14 HOH HOH . 
D 3 HOH A 15 147 15 HOH HOH . 
D 3 HOH A 16 148 16 HOH HOH . 
D 3 HOH A 17 149 17 HOH HOH . 
D 3 HOH A 18 150 18 HOH HOH . 
D 3 HOH A 19 151 19 HOH HOH . 
D 3 HOH A 20 152 20 HOH HOH . 
D 3 HOH A 21 153 21 HOH HOH . 
D 3 HOH A 22 154 22 HOH HOH . 
D 3 HOH A 23 155 23 HOH HOH . 
D 3 HOH A 24 156 24 HOH HOH . 
D 3 HOH A 25 157 25 HOH HOH . 
D 3 HOH A 26 158 26 HOH HOH . 
D 3 HOH A 27 159 27 HOH HOH . 
D 3 HOH A 28 160 28 HOH HOH . 
D 3 HOH A 29 161 29 HOH HOH . 
D 3 HOH A 30 162 30 HOH HOH . 
D 3 HOH A 31 163 31 HOH HOH . 
D 3 HOH A 32 164 32 HOH HOH . 
D 3 HOH A 33 165 33 HOH HOH . 
D 3 HOH A 34 166 34 HOH HOH . 
D 3 HOH A 35 167 35 HOH HOH . 
D 3 HOH A 36 168 36 HOH HOH . 
D 3 HOH A 37 169 37 HOH HOH . 
D 3 HOH A 38 170 38 HOH HOH . 
D 3 HOH A 39 171 39 HOH HOH . 
D 3 HOH A 40 172 40 HOH HOH . 
D 3 HOH A 41 173 41 HOH HOH . 
D 3 HOH A 42 174 42 HOH HOH . 
D 3 HOH A 43 175 43 HOH HOH . 
D 3 HOH A 44 176 44 HOH HOH . 
D 3 HOH A 45 177 45 HOH HOH . 
D 3 HOH A 46 178 46 HOH HOH . 
D 3 HOH A 47 179 47 HOH HOH . 
D 3 HOH A 48 180 48 HOH HOH . 
D 3 HOH A 49 181 49 HOH HOH . 
D 3 HOH A 50 182 50 HOH HOH . 
D 3 HOH A 51 183 51 HOH HOH . 
D 3 HOH A 52 184 52 HOH HOH . 
D 3 HOH A 53 185 53 HOH HOH . 
D 3 HOH A 54 186 54 HOH HOH . 
D 3 HOH A 55 187 55 HOH HOH . 
D 3 HOH A 56 188 56 HOH HOH . 
D 3 HOH A 57 189 57 HOH HOH . 
D 3 HOH A 58 190 58 HOH HOH . 
D 3 HOH A 59 191 59 HOH HOH . 
D 3 HOH A 60 192 60 HOH HOH . 
D 3 HOH A 61 193 61 HOH HOH . 
D 3 HOH A 62 194 62 HOH HOH . 
D 3 HOH A 63 195 63 HOH HOH . 
D 3 HOH A 64 196 64 HOH HOH . 
D 3 HOH A 65 197 65 HOH HOH . 
D 3 HOH A 66 198 66 HOH HOH . 
D 3 HOH A 67 199 67 HOH HOH . 
D 3 HOH A 68 200 68 HOH HOH . 
D 3 HOH A 69 201 69 HOH HOH . 
D 3 HOH A 70 202 70 HOH HOH . 
D 3 HOH A 71 203 71 HOH HOH . 
D 3 HOH A 72 204 72 HOH HOH . 
D 3 HOH A 73 205 73 HOH HOH . 
D 3 HOH A 74 206 74 HOH HOH . 
D 3 HOH A 75 207 75 HOH HOH . 
D 3 HOH A 76 208 76 HOH HOH . 
D 3 HOH A 77 209 77 HOH HOH . 
D 3 HOH A 78 210 78 HOH HOH . 
D 3 HOH A 79 211 79 HOH HOH . 
D 3 HOH A 80 212 80 HOH HOH . 
D 3 HOH A 81 213 81 HOH HOH . 
D 3 HOH A 82 214 82 HOH HOH . 
D 3 HOH A 83 215 83 HOH HOH . 
D 3 HOH A 84 216 84 HOH HOH . 
D 3 HOH A 85 217 85 HOH HOH . 
D 3 HOH A 86 218 86 HOH HOH . 
D 3 HOH A 87 219 87 HOH HOH . 
D 3 HOH A 88 220 88 HOH HOH . 
D 3 HOH A 89 221 89 HOH HOH . 
D 3 HOH A 90 222 90 HOH HOH . 
D 3 HOH A 91 223 91 HOH HOH . 
D 3 HOH A 92 224 92 HOH HOH . 
D 3 HOH A 93 225 93 HOH HOH . 
D 3 HOH A 94 226 94 HOH HOH . 
D 3 HOH A 95 227 95 HOH HOH . 
D 3 HOH A 96 228 96 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N NO3 . . . C 2 29.154 17.631 24.165 1 24.17 ? N NO3 132 A 1 
HETATM 2 O O1 NO3 . . . C 2 28.752 18.561 24.842 1 21.4 ? O1 NO3 132 A 1 
HETATM 3 O O2 NO3 . . . C 2 30.269 17.674 23.604 1 26.4 ? O2 NO3 132 A 1 
HETATM 4 O O3 NO3 . . . C 2 28.455 16.627 24.031 1 26.22 ? O3 NO3 132 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           330 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#