data_1JKH # _model_server_result.job_id 4piytNHkky2ysjdG5AI1sg _model_server_result.datetime_utc '2024-11-24 20:55:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jkh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":999}' # _entry.id 1JKH # _exptl.entry_id 1JKH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 315.675 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (-)-6-CHLORO-4-CYCLOPROPYLETHYNYL-4-TRIFLUOROMETHYL-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-2-ONE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JKH _cell.length_a 138.5 _cell.length_b 109 _cell.length_c 73.2 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JKH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 279 A LEU 279 1_555 A N CSD 280 A CSD 280 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C CSD 280 A CSD 280 1_555 A N LYS 281 A LYS 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? # _chem_comp.formula 'C14 H9 Cl F3 N O2' _chem_comp.formula_weight 315.675 _chem_comp.id EFZ _chem_comp.mon_nstd_flag . _chem_comp.name (-)-6-CHLORO-4-CYCLOPROPYLETHYNYL-4-TRIFLUOROMETHYL-1,4-DIHYDRO-2H-3,1-BENZOXAZIN-2-ONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DMP-266;Efavirenz # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CL C4 EFZ sing 98 n n F1 C13 EFZ sing 99 n n F2 C13 EFZ sing 100 n n F3 C13 EFZ sing 101 n n O1 C14 EFZ doub 102 n n O2 C7 EFZ sing 103 n n O2 C14 EFZ sing 104 n n N C1 EFZ sing 105 n n N C14 EFZ sing 106 n n N HN EFZ sing 107 n n C1 C2 EFZ doub 108 n y C1 C6 EFZ sing 109 n y C2 C3 EFZ sing 110 n y C2 H2 EFZ sing 111 n n C3 C4 EFZ doub 112 n y C3 H3 EFZ sing 113 n n C4 C5 EFZ sing 114 n y C5 C6 EFZ doub 115 n y C5 H5 EFZ sing 116 n n C6 C7 EFZ sing 117 n n C7 C8 EFZ sing 118 n n C7 C13 EFZ sing 119 n n C8 C9 EFZ trip 120 n n C9 C10 EFZ sing 121 n n C10 C11 EFZ sing 122 n n C10 C12 EFZ sing 123 n n C10 H101 EFZ sing 124 n n C11 C12 EFZ sing 125 n n C11 H111 EFZ sing 126 n n C11 H112 EFZ sing 127 n n C12 H121 EFZ sing 128 n n C12 H122 EFZ sing 129 n n # _atom_sites.entry_id 1JKH _atom_sites.fract_transf_matrix[1][1] 0.00722 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013661 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 EFZ A 1 999 999 EFZ DMP . D 4 HOH A 1 1001 1001 HOH WAT . D 4 HOH A 2 1002 1002 HOH WAT . D 4 HOH A 3 1003 1003 HOH WAT . D 4 HOH A 4 1004 1004 HOH WAT . D 4 HOH A 5 1005 1005 HOH WAT . D 4 HOH A 6 1006 1006 HOH WAT . D 4 HOH A 7 1007 1007 HOH WAT . D 4 HOH A 8 1008 1008 HOH WAT . D 4 HOH A 9 1009 1009 HOH WAT . D 4 HOH A 10 1010 1010 HOH WAT . D 4 HOH A 11 1011 1011 HOH WAT . D 4 HOH A 12 1012 1012 HOH WAT . D 4 HOH A 13 1013 1013 HOH WAT . D 4 HOH A 14 1014 1014 HOH WAT . D 4 HOH A 15 1015 1015 HOH WAT . D 4 HOH A 16 1016 1016 HOH WAT . D 4 HOH A 17 1017 1017 HOH WAT . D 4 HOH A 18 1018 1018 HOH WAT . D 4 HOH A 19 1019 1019 HOH WAT . D 4 HOH A 20 1020 1020 HOH WAT . D 4 HOH A 21 1021 1021 HOH WAT . D 4 HOH A 22 1022 1022 HOH WAT . D 4 HOH A 23 1023 1023 HOH WAT . D 4 HOH A 24 1024 1024 HOH WAT . D 4 HOH A 25 1025 1025 HOH WAT . D 4 HOH A 26 1026 1026 HOH WAT . D 4 HOH A 27 1027 1027 HOH WAT . D 4 HOH A 28 1028 1028 HOH WAT . D 4 HOH A 29 1029 1029 HOH WAT . D 4 HOH A 30 1031 1031 HOH WAT . D 4 HOH A 31 1032 1032 HOH WAT . D 4 HOH A 32 1034 1034 HOH WAT . D 4 HOH A 33 1035 1035 HOH WAT . D 4 HOH A 34 1036 1036 HOH WAT . D 4 HOH A 35 1037 1037 HOH WAT . D 4 HOH A 36 1038 1038 HOH WAT . D 4 HOH A 37 1039 1039 HOH WAT . D 4 HOH A 38 1053 1053 HOH WAT . D 4 HOH A 39 1054 1054 HOH WAT . D 4 HOH A 40 1055 1055 HOH WAT . D 4 HOH A 41 1056 1056 HOH WAT . D 4 HOH A 42 1057 1057 HOH WAT . D 4 HOH A 43 1058 1058 HOH WAT . D 4 HOH A 44 1059 1059 HOH WAT . D 4 HOH A 45 1060 1060 HOH WAT . D 4 HOH A 46 1061 1061 HOH WAT . D 4 HOH A 47 1062 1062 HOH WAT . D 4 HOH A 48 1063 1063 HOH WAT . D 4 HOH A 49 1065 1065 HOH WAT . D 4 HOH A 50 1066 1066 HOH WAT . D 4 HOH A 51 1067 1067 HOH WAT . D 4 HOH A 52 1094 1094 HOH WAT . D 4 HOH A 53 1095 1095 HOH WAT . D 4 HOH A 54 1096 1096 HOH WAT . D 4 HOH A 55 1097 1097 HOH WAT . D 4 HOH A 56 1098 1098 HOH WAT . D 4 HOH A 57 1099 1099 HOH WAT . D 4 HOH A 58 1100 1100 HOH WAT . D 4 HOH A 59 1101 1101 HOH WAT . D 4 HOH A 60 1102 1102 HOH WAT . D 4 HOH A 61 1103 1103 HOH WAT . D 4 HOH A 62 1104 1104 HOH WAT . D 4 HOH A 63 1105 1105 HOH WAT . D 4 HOH A 64 1106 1106 HOH WAT . D 4 HOH A 65 1107 1107 HOH WAT . D 4 HOH A 66 1108 1108 HOH WAT . D 4 HOH A 67 1109 1109 HOH WAT . D 4 HOH A 68 1111 1111 HOH WAT . D 4 HOH A 69 1112 1112 HOH WAT . D 4 HOH A 70 1113 1113 HOH WAT . D 4 HOH A 71 1114 1114 HOH WAT . E 4 HOH B 1 1030 1030 HOH WAT . E 4 HOH B 2 1033 1033 HOH WAT . E 4 HOH B 3 1040 1040 HOH WAT . E 4 HOH B 4 1041 1041 HOH WAT . E 4 HOH B 5 1042 1042 HOH WAT . E 4 HOH B 6 1043 1043 HOH WAT . E 4 HOH B 7 1044 1044 HOH WAT . E 4 HOH B 8 1045 1045 HOH WAT . E 4 HOH B 9 1046 1046 HOH WAT . E 4 HOH B 10 1047 1047 HOH WAT . E 4 HOH B 11 1048 1048 HOH WAT . E 4 HOH B 12 1049 1049 HOH WAT . E 4 HOH B 13 1050 1050 HOH WAT . E 4 HOH B 14 1051 1051 HOH WAT . E 4 HOH B 15 1052 1052 HOH WAT . E 4 HOH B 16 1064 1064 HOH WAT . E 4 HOH B 17 1068 1068 HOH WAT . E 4 HOH B 18 1069 1069 HOH WAT . E 4 HOH B 19 1070 1070 HOH WAT . E 4 HOH B 20 1071 1071 HOH WAT . E 4 HOH B 21 1072 1072 HOH WAT . E 4 HOH B 22 1073 1073 HOH WAT . E 4 HOH B 23 1074 1074 HOH WAT . E 4 HOH B 24 1075 1075 HOH WAT . E 4 HOH B 25 1076 1076 HOH WAT . E 4 HOH B 26 1077 1077 HOH WAT . E 4 HOH B 27 1078 1078 HOH WAT . E 4 HOH B 28 1079 1079 HOH WAT . E 4 HOH B 29 1080 1080 HOH WAT . E 4 HOH B 30 1081 1081 HOH WAT . E 4 HOH B 31 1082 1082 HOH WAT . E 4 HOH B 32 1083 1083 HOH WAT . E 4 HOH B 33 1084 1084 HOH WAT . E 4 HOH B 34 1085 1085 HOH WAT . E 4 HOH B 35 1086 1086 HOH WAT . E 4 HOH B 36 1087 1087 HOH WAT . E 4 HOH B 37 1088 1088 HOH WAT . E 4 HOH B 38 1089 1089 HOH WAT . E 4 HOH B 39 1090 1090 HOH WAT . E 4 HOH B 40 1091 1091 HOH WAT . E 4 HOH B 41 1092 1092 HOH WAT . E 4 HOH B 42 1093 1093 HOH WAT . E 4 HOH B 43 1110 1110 HOH WAT . E 4 HOH B 44 1115 1115 HOH WAT . E 4 HOH B 45 1116 1116 HOH WAT . E 4 HOH B 46 1117 1117 HOH WAT . E 4 HOH B 47 1118 1118 HOH WAT . E 4 HOH B 48 1119 1119 HOH WAT . E 4 HOH B 49 1120 1120 HOH WAT . E 4 HOH B 50 1121 1121 HOH WAT . E 4 HOH B 51 1122 1122 HOH WAT . E 4 HOH B 52 1123 1123 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 CL CL EFZ . . . C 3 -4.665 -32.811 24.129 1 53.88 ? CL EFZ 999 A 1 HETATM 2 F F1 EFZ . . . C 3 0.754 -37.406 23.978 1 55.27 ? F1 EFZ 999 A 1 HETATM 3 F F2 EFZ . . . C 3 -1.224 -36.905 24.576 1 64.33 ? F2 EFZ 999 A 1 HETATM 4 F F3 EFZ . . . C 3 -0.843 -37.496 22.566 1 70.61 ? F3 EFZ 999 A 1 HETATM 5 O O1 EFZ . . . C 3 1.556 -35.723 20.059 1 48.9 ? O1 EFZ 999 A 1 HETATM 6 O O2 EFZ . . . C 3 0.948 -35.286 22.156 1 64.99 ? O2 EFZ 999 A 1 HETATM 7 N N EFZ . . . C 3 -0.625 -35.162 20.409 1 48.51 ? N EFZ 999 A 1 HETATM 8 C C1 EFZ . . . C 3 -1.609 -34.574 21.277 1 42.81 ? C1 EFZ 999 A 1 HETATM 9 C C2 EFZ . . . C 3 -2.808 -34.013 20.773 1 31.26 ? C2 EFZ 999 A 1 HETATM 10 C C3 EFZ . . . C 3 -3.739 -33.466 21.678 1 44.24 ? C3 EFZ 999 A 1 HETATM 11 C C4 EFZ . . . C 3 -3.498 -33.484 23.047 1 41.67 ? C4 EFZ 999 A 1 HETATM 12 C C5 EFZ . . . C 3 -2.332 -34.024 23.556 1 38.09 ? C5 EFZ 999 A 1 HETATM 13 C C6 EFZ . . . C 3 -1.406 -34.605 22.675 1 46.47 ? C6 EFZ 999 A 1 HETATM 14 C C7 EFZ . . . C 3 -0.096 -35.286 23.197 1 59.58 ? C7 EFZ 999 A 1 HETATM 15 C C8 EFZ . . . C 3 0.455 -34.607 24.391 1 61.1 ? C8 EFZ 999 A 1 HETATM 16 C C9 EFZ . . . C 3 0.89 -34.05 25.32 1 68.68 ? C9 EFZ 999 A 1 HETATM 17 C C10 EFZ . . . C 3 1.519 -33.218 26.667 1 65.58 ? C10 EFZ 999 A 1 HETATM 18 C C11 EFZ . . . C 3 2.254 -32.34 26.203 1 56.86 ? C11 EFZ 999 A 1 HETATM 19 C C12 EFZ . . . C 3 1.063 -32.072 26.592 1 58.37 ? C12 EFZ 999 A 1 HETATM 20 C C13 EFZ . . . C 3 -0.357 -36.796 23.583 1 60.01 ? C13 EFZ 999 A 1 HETATM 21 C C14 EFZ . . . C 3 0.681 -35.412 20.804 1 55.51 ? C14 EFZ 999 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 21 #