data_1JLK # _model_server_result.job_id kZwZMqK3eCpuXsYDE-_EiA _model_server_result.datetime_utc '2025-01-08 17:59:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jlk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":625}' # _entry.id 1JLK # _exptl.entry_id 1JLK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.68 _cell.angle_gamma 90 _cell.entry_id 1JLK _cell.length_a 40.511 _cell.length_b 78.561 _cell.length_c 43.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JLK _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 16 A ASP 16 1_555 F MN MN . A MN 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.239 ? metalc ? metalc2 A OD2 ASP 68 A ASP 68 1_555 F MN MN . A MN 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc3 A O ASN 70 A ASN 70 1_555 F MN MN . A MN 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.38 ? metalc ? metalc4 C O1 SO4 . A SO4 624 1_555 F MN MN . A MN 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.618 ? metalc ? metalc5 C O2 SO4 . A SO4 624 1_555 F MN MN . A MN 627 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.71 ? metalc ? metalc6 F MN MN . A MN 627 1_555 G O HOH . A HOH 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 290 n n S O2 SO4 doub 291 n n S O3 SO4 sing 292 n n S O4 SO4 sing 293 n n # _atom_sites.entry_id 1JLK _atom_sites.fract_transf_matrix[1][1] 0.024685 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007867 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012729 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.024012 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 624 624 SO4 SO4 . D 2 SO4 A 1 625 625 SO4 SO4 . E 2 SO4 A 1 626 626 SO4 SO4 . F 3 MN A 1 627 627 MN MN . G 4 HOH A 1 628 1 HOH TIP . G 4 HOH A 2 629 2 HOH TIP . G 4 HOH A 3 630 3 HOH TIP . G 4 HOH A 4 631 5 HOH TIP . G 4 HOH A 5 632 6 HOH TIP . G 4 HOH A 6 633 10 HOH TIP . G 4 HOH A 7 634 12 HOH TIP . G 4 HOH A 8 635 13 HOH TIP . G 4 HOH A 9 636 19 HOH TIP . G 4 HOH A 10 637 21 HOH TIP . G 4 HOH A 11 638 25 HOH TIP . G 4 HOH A 12 639 26 HOH TIP . G 4 HOH A 13 640 27 HOH TIP . G 4 HOH A 14 641 29 HOH TIP . G 4 HOH A 15 642 32 HOH TIP . G 4 HOH A 16 643 34 HOH TIP . G 4 HOH A 17 644 41 HOH TIP . G 4 HOH A 18 645 42 HOH TIP . G 4 HOH A 19 646 44 HOH TIP . G 4 HOH A 20 647 45 HOH TIP . G 4 HOH A 21 648 46 HOH TIP . G 4 HOH A 22 649 47 HOH TIP . G 4 HOH A 23 650 48 HOH TIP . G 4 HOH A 24 651 52 HOH TIP . G 4 HOH A 25 652 53 HOH TIP . G 4 HOH A 26 653 54 HOH TIP . G 4 HOH A 27 654 56 HOH TIP . G 4 HOH A 28 655 57 HOH TIP . G 4 HOH A 29 656 62 HOH TIP . G 4 HOH A 30 657 63 HOH TIP . G 4 HOH A 31 658 65 HOH TIP . G 4 HOH A 32 659 69 HOH TIP . G 4 HOH A 33 660 70 HOH TIP . G 4 HOH A 34 661 73 HOH TIP . G 4 HOH A 35 662 74 HOH TIP . G 4 HOH A 36 663 75 HOH TIP . G 4 HOH A 37 664 87 HOH TIP . G 4 HOH A 38 665 90 HOH TIP . G 4 HOH A 39 666 95 HOH TIP . G 4 HOH A 40 667 100 HOH TIP . G 4 HOH A 41 668 101 HOH TIP . G 4 HOH A 42 669 107 HOH TIP . G 4 HOH A 43 670 116 HOH TIP . G 4 HOH A 44 671 118 HOH TIP . G 4 HOH A 45 672 121 HOH TIP . G 4 HOH A 46 673 125 HOH TIP . G 4 HOH A 47 674 126 HOH TIP . G 4 HOH A 48 675 129 HOH TIP . G 4 HOH A 49 676 131 HOH TIP . G 4 HOH A 50 677 133 HOH TIP . H 4 HOH B 1 148 4 HOH TIP . H 4 HOH B 2 149 7 HOH TIP . H 4 HOH B 3 150 8 HOH TIP . H 4 HOH B 4 151 9 HOH TIP . H 4 HOH B 5 152 11 HOH TIP . H 4 HOH B 6 153 14 HOH TIP . H 4 HOH B 7 154 15 HOH TIP . H 4 HOH B 8 155 16 HOH TIP . H 4 HOH B 9 156 18 HOH TIP . H 4 HOH B 10 157 20 HOH TIP . H 4 HOH B 11 158 22 HOH TIP . H 4 HOH B 12 159 23 HOH TIP . H 4 HOH B 13 160 24 HOH TIP . H 4 HOH B 14 161 28 HOH TIP . H 4 HOH B 15 162 30 HOH TIP . H 4 HOH B 16 163 31 HOH TIP . H 4 HOH B 17 164 35 HOH TIP . H 4 HOH B 18 165 37 HOH TIP . H 4 HOH B 19 166 38 HOH TIP . H 4 HOH B 20 167 39 HOH TIP . H 4 HOH B 21 168 40 HOH TIP . H 4 HOH B 22 169 43 HOH TIP . H 4 HOH B 23 170 50 HOH TIP . H 4 HOH B 24 171 51 HOH TIP . H 4 HOH B 25 172 55 HOH TIP . H 4 HOH B 26 173 60 HOH TIP . H 4 HOH B 27 174 64 HOH TIP . H 4 HOH B 28 175 67 HOH TIP . H 4 HOH B 29 176 71 HOH TIP . H 4 HOH B 30 177 72 HOH TIP . H 4 HOH B 31 178 76 HOH TIP . H 4 HOH B 32 179 77 HOH TIP . H 4 HOH B 33 180 78 HOH TIP . H 4 HOH B 34 181 80 HOH TIP . H 4 HOH B 35 182 81 HOH TIP . H 4 HOH B 36 183 82 HOH TIP . H 4 HOH B 37 184 85 HOH TIP . H 4 HOH B 38 185 86 HOH TIP . H 4 HOH B 39 186 93 HOH TIP . H 4 HOH B 40 187 99 HOH TIP . H 4 HOH B 41 188 106 HOH TIP . H 4 HOH B 42 189 108 HOH TIP . H 4 HOH B 43 190 110 HOH TIP . H 4 HOH B 44 191 112 HOH TIP . H 4 HOH B 45 192 117 HOH TIP . H 4 HOH B 46 193 119 HOH TIP . H 4 HOH B 47 194 120 HOH TIP . H 4 HOH B 48 195 123 HOH TIP . H 4 HOH B 49 196 124 HOH TIP . H 4 HOH B 50 197 138 HOH TIP . H 4 HOH B 51 198 139 HOH TIP . H 4 HOH B 52 199 141 HOH TIP . H 4 HOH B 53 200 143 HOH TIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 2 -15.153 -5.189 21.766 1 43.97 ? S SO4 625 A 1 HETATM 2 O O1 SO4 . . . D 2 -16.086 -6.279 21.401 1 46.18 ? O1 SO4 625 A 1 HETATM 3 O O2 SO4 . . . D 2 -13.771 -5.598 21.45 1 44.67 ? O2 SO4 625 A 1 HETATM 4 O O3 SO4 . . . D 2 -15.49 -3.977 20.994 1 44.31 ? O3 SO4 625 A 1 HETATM 5 O O4 SO4 . . . D 2 -15.264 -4.901 23.21 1 45.17 ? O4 SO4 625 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 338 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 5 #