data_1JLR # _model_server_result.job_id jcW6QAeR7ieNWXCv6TNQew _model_server_result.datetime_utc '2024-11-25 21:33:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jlr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":804}' # _entry.id 1JLR # _exptl.entry_id 1JLR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115 _cell.angle_gamma 90 _cell.entry_id 1JLR _cell.length_a 60.6 _cell.length_b 141.8 _cell.length_c 71.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JLR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 H N N ? 2 I N N ? 2 K N N ? 2 L N N ? 2 N N N ? 2 O N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 310 n n P O2 PO4 sing 311 n n P O3 PO4 sing 312 n n P O4 PO4 sing 313 n n # _atom_sites.entry_id 1JLR _atom_sites.fract_transf_matrix[1][1] 0.016502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007695 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007052 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015453 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 805 299 PO4 PO4 . F 2 PO4 A 1 806 199 PO4 PO4 . G 3 GTP A 1 303 0 GTP GTP . H 2 PO4 B 1 800 799 PO4 PO4 . I 2 PO4 B 1 804 499 PO4 PO4 . J 3 GTP B 1 301 0 GTP GTP . K 2 PO4 D 1 799 799 PO4 PO4 . L 2 PO4 D 1 801 799 PO4 PO4 . M 3 GTP D 1 302 0 GTP GTP . N 2 PO4 C 1 802 799 PO4 PO4 . O 2 PO4 C 1 803 399 PO4 PO4 . P 3 GTP C 1 300 0 GTP GTP . Q 4 HOH A 1 807 11 HOH WAT . Q 4 HOH A 2 808 14 HOH WAT . Q 4 HOH A 3 809 21 HOH WAT . Q 4 HOH A 4 810 22 HOH WAT . Q 4 HOH A 5 811 28 HOH WAT . Q 4 HOH A 6 812 30 HOH WAT . Q 4 HOH A 7 813 37 HOH WAT . Q 4 HOH A 8 814 38 HOH WAT . Q 4 HOH A 9 815 43 HOH WAT . Q 4 HOH A 10 816 46 HOH WAT . Q 4 HOH A 11 817 64 HOH WAT . Q 4 HOH A 12 818 68 HOH WAT . Q 4 HOH A 13 819 75 HOH WAT . Q 4 HOH A 14 820 77 HOH WAT . Q 4 HOH A 15 821 79 HOH WAT . Q 4 HOH A 16 822 85 HOH WAT . Q 4 HOH A 17 823 95 HOH WAT . Q 4 HOH A 18 824 98 HOH WAT . Q 4 HOH A 19 825 104 HOH WAT . Q 4 HOH A 20 826 105 HOH WAT . Q 4 HOH A 21 827 106 HOH WAT . Q 4 HOH A 22 828 107 HOH WAT . Q 4 HOH A 23 829 112 HOH WAT . Q 4 HOH A 24 830 117 HOH WAT . Q 4 HOH A 25 831 118 HOH WAT . Q 4 HOH A 26 832 119 HOH WAT . Q 4 HOH A 27 833 131 HOH WAT . Q 4 HOH A 28 834 133 HOH WAT . Q 4 HOH A 29 835 141 HOH WAT . Q 4 HOH A 30 836 142 HOH WAT . Q 4 HOH A 31 837 143 HOH WAT . Q 4 HOH A 32 838 144 HOH WAT . Q 4 HOH A 33 839 149 HOH WAT . Q 4 HOH A 34 840 156 HOH WAT . Q 4 HOH A 35 841 163 HOH WAT . Q 4 HOH A 36 842 165 HOH WAT . Q 4 HOH A 37 843 167 HOH WAT . Q 4 HOH A 38 844 169 HOH WAT . R 4 HOH B 1 805 26 HOH WAT . R 4 HOH B 2 806 34 HOH WAT . R 4 HOH B 3 807 47 HOH WAT . R 4 HOH B 4 808 49 HOH WAT . R 4 HOH B 5 809 55 HOH WAT . R 4 HOH B 6 810 56 HOH WAT . R 4 HOH B 7 811 57 HOH WAT . R 4 HOH B 8 812 63 HOH WAT . R 4 HOH B 9 813 65 HOH WAT . R 4 HOH B 10 814 80 HOH WAT . R 4 HOH B 11 815 84 HOH WAT . R 4 HOH B 12 816 88 HOH WAT . R 4 HOH B 13 817 89 HOH WAT . R 4 HOH B 14 818 90 HOH WAT . R 4 HOH B 15 819 91 HOH WAT . R 4 HOH B 16 820 93 HOH WAT . R 4 HOH B 17 821 94 HOH WAT . R 4 HOH B 18 822 96 HOH WAT . R 4 HOH B 19 823 97 HOH WAT . R 4 HOH B 20 824 100 HOH WAT . R 4 HOH B 21 825 102 HOH WAT . R 4 HOH B 22 826 103 HOH WAT . R 4 HOH B 23 827 109 HOH WAT . R 4 HOH B 24 828 115 HOH WAT . R 4 HOH B 25 829 123 HOH WAT . R 4 HOH B 26 830 129 HOH WAT . R 4 HOH B 27 831 137 HOH WAT . R 4 HOH B 28 832 138 HOH WAT . R 4 HOH B 29 833 140 HOH WAT . R 4 HOH B 30 834 147 HOH WAT . R 4 HOH B 31 835 153 HOH WAT . R 4 HOH B 32 836 154 HOH WAT . R 4 HOH B 33 837 164 HOH WAT . S 4 HOH D 1 802 12 HOH WAT . S 4 HOH D 2 803 13 HOH WAT . S 4 HOH D 3 804 15 HOH WAT . S 4 HOH D 4 805 18 HOH WAT . S 4 HOH D 5 806 27 HOH WAT . S 4 HOH D 6 807 29 HOH WAT . S 4 HOH D 7 808 31 HOH WAT . S 4 HOH D 8 809 32 HOH WAT . S 4 HOH D 9 810 35 HOH WAT . S 4 HOH D 10 811 36 HOH WAT . S 4 HOH D 11 812 39 HOH WAT . S 4 HOH D 12 813 45 HOH WAT . S 4 HOH D 13 814 52 HOH WAT . S 4 HOH D 14 815 53 HOH WAT . S 4 HOH D 15 816 54 HOH WAT . S 4 HOH D 16 817 59 HOH WAT . S 4 HOH D 17 818 61 HOH WAT . S 4 HOH D 18 819 66 HOH WAT . S 4 HOH D 19 820 67 HOH WAT . S 4 HOH D 20 821 69 HOH WAT . S 4 HOH D 21 822 70 HOH WAT . S 4 HOH D 22 823 72 HOH WAT . S 4 HOH D 23 824 73 HOH WAT . S 4 HOH D 24 825 76 HOH WAT . S 4 HOH D 25 826 81 HOH WAT . S 4 HOH D 26 827 82 HOH WAT . S 4 HOH D 27 828 83 HOH WAT . S 4 HOH D 28 829 99 HOH WAT . S 4 HOH D 29 830 101 HOH WAT . S 4 HOH D 30 831 110 HOH WAT . S 4 HOH D 31 832 111 HOH WAT . S 4 HOH D 32 833 114 HOH WAT . S 4 HOH D 33 834 116 HOH WAT . S 4 HOH D 34 835 126 HOH WAT . S 4 HOH D 35 836 128 HOH WAT . S 4 HOH D 36 837 132 HOH WAT . S 4 HOH D 37 838 134 HOH WAT . S 4 HOH D 38 839 136 HOH WAT . S 4 HOH D 39 840 139 HOH WAT . S 4 HOH D 40 841 145 HOH WAT . S 4 HOH D 41 842 146 HOH WAT . S 4 HOH D 42 843 152 HOH WAT . S 4 HOH D 43 844 157 HOH WAT . S 4 HOH D 44 845 160 HOH WAT . S 4 HOH D 45 846 162 HOH WAT . T 4 HOH C 1 804 10 HOH WAT . T 4 HOH C 2 805 16 HOH WAT . T 4 HOH C 3 806 17 HOH WAT . T 4 HOH C 4 807 19 HOH WAT . T 4 HOH C 5 808 20 HOH WAT . T 4 HOH C 6 809 23 HOH WAT . T 4 HOH C 7 810 24 HOH WAT . T 4 HOH C 8 811 25 HOH WAT . T 4 HOH C 9 812 33 HOH WAT . T 4 HOH C 10 813 40 HOH WAT . T 4 HOH C 11 814 41 HOH WAT . T 4 HOH C 12 815 42 HOH WAT . T 4 HOH C 13 816 44 HOH WAT . T 4 HOH C 14 817 48 HOH WAT . T 4 HOH C 15 818 50 HOH WAT . T 4 HOH C 16 819 51 HOH WAT . T 4 HOH C 17 820 58 HOH WAT . T 4 HOH C 18 821 60 HOH WAT . T 4 HOH C 19 822 62 HOH WAT . T 4 HOH C 20 823 71 HOH WAT . T 4 HOH C 21 824 74 HOH WAT . T 4 HOH C 22 825 78 HOH WAT . T 4 HOH C 23 826 86 HOH WAT . T 4 HOH C 24 827 87 HOH WAT . T 4 HOH C 25 828 108 HOH WAT . T 4 HOH C 26 829 113 HOH WAT . T 4 HOH C 27 830 120 HOH WAT . T 4 HOH C 28 831 121 HOH WAT . T 4 HOH C 29 832 122 HOH WAT . T 4 HOH C 30 833 124 HOH WAT . T 4 HOH C 31 834 125 HOH WAT . T 4 HOH C 32 835 127 HOH WAT . T 4 HOH C 33 836 130 HOH WAT . T 4 HOH C 34 837 135 HOH WAT . T 4 HOH C 35 838 148 HOH WAT . T 4 HOH C 36 839 150 HOH WAT . T 4 HOH C 37 840 151 HOH WAT . T 4 HOH C 38 841 155 HOH WAT . T 4 HOH C 39 842 158 HOH WAT . T 4 HOH C 40 843 159 HOH WAT . T 4 HOH C 41 844 161 HOH WAT . T 4 HOH C 42 845 166 HOH WAT . T 4 HOH C 43 846 168 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . I 2 -4.45 64.407 42.574 1 42.64 ? P PO4 804 B 1 HETATM 2 O O1 PO4 . . . I 2 -4.93 65.557 43.381 1 45.62 ? O1 PO4 804 B 1 HETATM 3 O O2 PO4 . . . I 2 -3.709 64.909 41.385 1 40.64 ? O2 PO4 804 B 1 HETATM 4 O O3 PO4 . . . I 2 -5.612 63.605 42.128 1 41.84 ? O3 PO4 804 B 1 HETATM 5 O O4 PO4 . . . I 2 -3.55 63.563 43.404 1 39.42 ? O4 PO4 804 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 268 _model_server_stats.encode_time_ms 30 _model_server_stats.element_count 5 #