data_1JM6
#
_model_server_result.job_id            clhB4KKED-XiA-Ii7Clx7Q 
_model_server_result.datetime_utc      '2024-11-27 02:54:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1jm6 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":4611}' 
#
_entry.id    1JM6 
#
_exptl.entry_id    1JM6 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.52 
_cell.angle_gamma         90 
_cell.entry_id            1JM6 
_cell.length_a            71.421 
_cell.length_b            109.874 
_cell.length_c            71.414 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1JM6 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASN 255 A ASN 1247 1_555 C MG MG . A MG 4601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.736 ? 
metalc ? metalc2 D O3B ADP . A ADP 3500 1_555 C MG MG . A MG 4601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc3 D O2A ADP . A ADP 3500 1_555 C MG MG . A MG 4601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? 
metalc ? metalc4 C MG MG . A MG 4601 1_555 G O HOH . A HOH 4602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
metalc ? metalc5 C MG MG . A MG 4601 1_555 G O HOH . A HOH 4603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? 
metalc ? metalc6 B OD1 ASN 255 B ASN 1247 1_555 E MG MG . B MG 4611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? 
metalc ? metalc7 F O3B ADP . B ADP 3510 1_555 E MG MG . B MG 4611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc8 F O2A ADP . B ADP 3510 1_555 E MG MG . B MG 4611 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.99 ? 
metalc ? metalc9 E MG MG . B MG 4611 1_555 H O HOH . B HOH 6003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
metalc ? metalc10 E MG MG . B MG 4611 1_555 H O HOH . B HOH 6004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     1JM6 
_atom_sites.fract_transf_matrix[1][1]    0.014001 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003626 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009101 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014465 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 MG A 1 4601 4601 MG MG . 
D 3 ADP A 1 3500 3500 ADP ADP . 
E 2 MG B 1 4611 4611 MG MG . 
F 3 ADP B 1 3510 3510 ADP ADP . 
G 4 HOH A 1 4602 4602 HOH HOH . 
G 4 HOH A 2 4603 4603 HOH HOH . 
G 4 HOH A 3 6007 6007 HOH HOH . 
G 4 HOH A 4 6008 6008 HOH HOH . 
G 4 HOH A 5 6013 6013 HOH HOH . 
G 4 HOH A 6 6014 6014 HOH HOH . 
G 4 HOH A 7 6016 6016 HOH HOH . 
G 4 HOH A 8 6018 6018 HOH HOH . 
G 4 HOH A 9 6019 6019 HOH HOH . 
G 4 HOH A 10 6020 6020 HOH HOH . 
G 4 HOH A 11 6021 6021 HOH HOH . 
G 4 HOH A 12 6024 6024 HOH HOH . 
G 4 HOH A 13 6025 6025 HOH HOH . 
G 4 HOH A 14 6028 6028 HOH HOH . 
G 4 HOH A 15 6031 6031 HOH HOH . 
G 4 HOH A 16 6032 6032 HOH HOH . 
G 4 HOH A 17 6033 6033 HOH HOH . 
G 4 HOH A 18 6036 6036 HOH HOH . 
G 4 HOH A 19 6038 6038 HOH HOH . 
G 4 HOH A 20 6039 6039 HOH HOH . 
G 4 HOH A 21 6044 6044 HOH HOH . 
G 4 HOH A 22 6045 6045 HOH HOH . 
G 4 HOH A 23 6046 6046 HOH HOH . 
G 4 HOH A 24 6047 6047 HOH HOH . 
G 4 HOH A 25 6048 6048 HOH HOH . 
G 4 HOH A 26 6050 6050 HOH HOH . 
G 4 HOH A 27 6053 6053 HOH HOH . 
G 4 HOH A 28 6067 6067 HOH HOH . 
G 4 HOH A 29 6069 6069 HOH HOH . 
G 4 HOH A 30 6070 6070 HOH HOH . 
G 4 HOH A 31 6072 6072 HOH HOH . 
G 4 HOH A 32 6073 6073 HOH HOH . 
G 4 HOH A 33 6074 6074 HOH HOH . 
G 4 HOH A 34 6076 6076 HOH HOH . 
G 4 HOH A 35 6077 6077 HOH HOH . 
G 4 HOH A 36 6078 6078 HOH HOH . 
G 4 HOH A 37 6079 6079 HOH HOH . 
G 4 HOH A 38 6080 6080 HOH HOH . 
G 4 HOH A 39 6081 6081 HOH HOH . 
G 4 HOH A 40 6082 6082 HOH HOH . 
G 4 HOH A 41 6083 6083 HOH HOH . 
G 4 HOH A 42 6084 6084 HOH HOH . 
G 4 HOH A 43 6085 6085 HOH HOH . 
G 4 HOH A 44 6091 6091 HOH HOH . 
G 4 HOH A 45 6092 6092 HOH HOH . 
G 4 HOH A 46 6094 6094 HOH HOH . 
G 4 HOH A 47 6096 6096 HOH HOH . 
G 4 HOH A 48 6097 6097 HOH HOH . 
G 4 HOH A 49 6098 6098 HOH HOH . 
G 4 HOH A 50 6099 6099 HOH HOH . 
G 4 HOH A 51 6100 6100 HOH HOH . 
G 4 HOH A 52 6101 6101 HOH HOH . 
G 4 HOH A 53 6102 6102 HOH HOH . 
G 4 HOH A 54 6104 6104 HOH HOH . 
G 4 HOH A 55 6111 6111 HOH HOH . 
G 4 HOH A 56 6112 6112 HOH HOH . 
G 4 HOH A 57 6114 6114 HOH HOH . 
G 4 HOH A 58 6115 6115 HOH HOH . 
G 4 HOH A 59 6116 6116 HOH HOH . 
G 4 HOH A 60 6122 6122 HOH HOH . 
G 4 HOH A 61 6124 6124 HOH HOH . 
G 4 HOH A 62 6126 6126 HOH HOH . 
G 4 HOH A 63 6127 6127 HOH HOH . 
G 4 HOH A 64 6130 6130 HOH HOH . 
G 4 HOH A 65 6133 6133 HOH HOH . 
G 4 HOH A 66 6136 6136 HOH HOH . 
G 4 HOH A 67 6138 6138 HOH HOH . 
G 4 HOH A 68 6140 6140 HOH HOH . 
G 4 HOH A 69 6142 6142 HOH HOH . 
G 4 HOH A 70 6143 6143 HOH HOH . 
G 4 HOH A 71 6144 6144 HOH HOH . 
G 4 HOH A 72 6146 6146 HOH HOH . 
G 4 HOH A 73 6148 6148 HOH HOH . 
G 4 HOH A 74 6149 6149 HOH HOH . 
G 4 HOH A 75 6152 6152 HOH HOH . 
G 4 HOH A 76 6153 6153 HOH HOH . 
G 4 HOH A 77 6155 6155 HOH HOH . 
G 4 HOH A 78 6159 6159 HOH HOH . 
G 4 HOH A 79 6161 6161 HOH HOH . 
G 4 HOH A 80 6162 6162 HOH HOH . 
G 4 HOH A 81 6169 6169 HOH HOH . 
G 4 HOH A 82 6170 6170 HOH HOH . 
G 4 HOH A 83 6172 6172 HOH HOH . 
G 4 HOH A 84 6176 6176 HOH HOH . 
G 4 HOH A 85 6177 6177 HOH HOH . 
G 4 HOH A 86 6178 6178 HOH HOH . 
G 4 HOH A 87 6180 6180 HOH HOH . 
G 4 HOH A 88 6181 6181 HOH HOH . 
G 4 HOH A 89 6182 6182 HOH HOH . 
G 4 HOH A 90 6183 6183 HOH HOH . 
G 4 HOH A 91 6184 6184 HOH HOH . 
G 4 HOH A 92 6185 6185 HOH HOH . 
G 4 HOH A 93 6186 6186 HOH HOH . 
G 4 HOH A 94 6187 6187 HOH HOH . 
G 4 HOH A 95 6188 6188 HOH HOH . 
G 4 HOH A 96 6202 6202 HOH HOH . 
G 4 HOH A 97 6204 6204 HOH HOH . 
G 4 HOH A 98 6205 6205 HOH HOH . 
G 4 HOH A 99 6206 6206 HOH HOH . 
G 4 HOH A 100 6207 6207 HOH HOH . 
G 4 HOH A 101 6208 6208 HOH HOH . 
G 4 HOH A 102 6209 6209 HOH HOH . 
G 4 HOH A 103 6210 6210 HOH HOH . 
G 4 HOH A 104 6211 6211 HOH HOH . 
G 4 HOH A 105 6212 6212 HOH HOH . 
G 4 HOH A 106 6213 6213 HOH HOH . 
G 4 HOH A 107 6214 6214 HOH HOH . 
G 4 HOH A 108 6215 6215 HOH HOH . 
G 4 HOH A 109 6216 6216 HOH HOH . 
G 4 HOH A 110 6217 6217 HOH HOH . 
G 4 HOH A 111 6218 6218 HOH HOH . 
G 4 HOH A 112 6219 6219 HOH HOH . 
G 4 HOH A 113 6220 6220 HOH HOH . 
G 4 HOH A 114 6221 6221 HOH HOH . 
G 4 HOH A 115 6222 6222 HOH HOH . 
G 4 HOH A 116 6223 6223 HOH HOH . 
G 4 HOH A 117 6224 6224 HOH HOH . 
G 4 HOH A 118 6225 6225 HOH HOH . 
G 4 HOH A 119 6226 6226 HOH HOH . 
H 4 HOH B 1 6003 6003 HOH HOH . 
H 4 HOH B 2 6004 6004 HOH HOH . 
H 4 HOH B 3 6005 6005 HOH HOH . 
H 4 HOH B 4 6006 6006 HOH HOH . 
H 4 HOH B 5 6009 6009 HOH HOH . 
H 4 HOH B 6 6010 6010 HOH HOH . 
H 4 HOH B 7 6012 6012 HOH HOH . 
H 4 HOH B 8 6015 6015 HOH HOH . 
H 4 HOH B 9 6017 6017 HOH HOH . 
H 4 HOH B 10 6022 6022 HOH HOH . 
H 4 HOH B 11 6023 6023 HOH HOH . 
H 4 HOH B 12 6026 6026 HOH HOH . 
H 4 HOH B 13 6027 6027 HOH HOH . 
H 4 HOH B 14 6029 6029 HOH HOH . 
H 4 HOH B 15 6030 6030 HOH HOH . 
H 4 HOH B 16 6034 6034 HOH HOH . 
H 4 HOH B 17 6035 6035 HOH HOH . 
H 4 HOH B 18 6037 6037 HOH HOH . 
H 4 HOH B 19 6040 6040 HOH HOH . 
H 4 HOH B 20 6042 6042 HOH HOH . 
H 4 HOH B 21 6043 6043 HOH HOH . 
H 4 HOH B 22 6049 6049 HOH HOH . 
H 4 HOH B 23 6051 6051 HOH HOH . 
H 4 HOH B 24 6052 6052 HOH HOH . 
H 4 HOH B 25 6054 6054 HOH HOH . 
H 4 HOH B 26 6055 6055 HOH HOH . 
H 4 HOH B 27 6056 6056 HOH HOH . 
H 4 HOH B 28 6057 6057 HOH HOH . 
H 4 HOH B 29 6058 6058 HOH HOH . 
H 4 HOH B 30 6059 6059 HOH HOH . 
H 4 HOH B 31 6060 6060 HOH HOH . 
H 4 HOH B 32 6061 6061 HOH HOH . 
H 4 HOH B 33 6062 6062 HOH HOH . 
H 4 HOH B 34 6063 6063 HOH HOH . 
H 4 HOH B 35 6064 6064 HOH HOH . 
H 4 HOH B 36 6065 6065 HOH HOH . 
H 4 HOH B 37 6066 6066 HOH HOH . 
H 4 HOH B 38 6068 6068 HOH HOH . 
H 4 HOH B 39 6071 6071 HOH HOH . 
H 4 HOH B 40 6075 6075 HOH HOH . 
H 4 HOH B 41 6086 6086 HOH HOH . 
H 4 HOH B 42 6087 6087 HOH HOH . 
H 4 HOH B 43 6088 6088 HOH HOH . 
H 4 HOH B 44 6089 6089 HOH HOH . 
H 4 HOH B 45 6090 6090 HOH HOH . 
H 4 HOH B 46 6093 6093 HOH HOH . 
H 4 HOH B 47 6095 6095 HOH HOH . 
H 4 HOH B 48 6103 6103 HOH HOH . 
H 4 HOH B 49 6105 6105 HOH HOH . 
H 4 HOH B 50 6106 6106 HOH HOH . 
H 4 HOH B 51 6107 6107 HOH HOH . 
H 4 HOH B 52 6108 6108 HOH HOH . 
H 4 HOH B 53 6110 6110 HOH HOH . 
H 4 HOH B 54 6113 6113 HOH HOH . 
H 4 HOH B 55 6117 6117 HOH HOH . 
H 4 HOH B 56 6119 6119 HOH HOH . 
H 4 HOH B 57 6120 6120 HOH HOH . 
H 4 HOH B 58 6121 6121 HOH HOH . 
H 4 HOH B 59 6123 6123 HOH HOH . 
H 4 HOH B 60 6125 6125 HOH HOH . 
H 4 HOH B 61 6128 6128 HOH HOH . 
H 4 HOH B 62 6129 6129 HOH HOH . 
H 4 HOH B 63 6131 6131 HOH HOH . 
H 4 HOH B 64 6132 6132 HOH HOH . 
H 4 HOH B 65 6134 6134 HOH HOH . 
H 4 HOH B 66 6135 6135 HOH HOH . 
H 4 HOH B 67 6137 6137 HOH HOH . 
H 4 HOH B 68 6139 6139 HOH HOH . 
H 4 HOH B 69 6141 6141 HOH HOH . 
H 4 HOH B 70 6145 6145 HOH HOH . 
H 4 HOH B 71 6147 6147 HOH HOH . 
H 4 HOH B 72 6150 6150 HOH HOH . 
H 4 HOH B 73 6151 6151 HOH HOH . 
H 4 HOH B 74 6156 6156 HOH HOH . 
H 4 HOH B 75 6163 6163 HOH HOH . 
H 4 HOH B 76 6164 6164 HOH HOH . 
H 4 HOH B 77 6165 6165 HOH HOH . 
H 4 HOH B 78 6168 6168 HOH HOH . 
H 4 HOH B 79 6171 6171 HOH HOH . 
H 4 HOH B 80 6173 6173 HOH HOH . 
H 4 HOH B 81 6174 6174 HOH HOH . 
H 4 HOH B 82 6175 6175 HOH HOH . 
H 4 HOH B 83 6179 6179 HOH HOH . 
H 4 HOH B 84 6189 6189 HOH HOH . 
H 4 HOH B 85 6190 6190 HOH HOH . 
H 4 HOH B 86 6191 6191 HOH HOH . 
H 4 HOH B 87 6192 6192 HOH HOH . 
H 4 HOH B 88 6193 6193 HOH HOH . 
H 4 HOH B 89 6194 6194 HOH HOH . 
H 4 HOH B 90 6196 6196 HOH HOH . 
H 4 HOH B 91 6198 6198 HOH HOH . 
H 4 HOH B 92 6199 6199 HOH HOH . 
H 4 HOH B 93 6200 6200 HOH HOH . 
H 4 HOH B 94 6201 6201 HOH HOH . 
H 4 HOH B 95 6227 6227 HOH HOH . 
H 4 HOH B 96 6228 6228 HOH HOH . 
H 4 HOH B 97 6229 6229 HOH HOH . 
H 4 HOH B 98 6230 6230 HOH HOH . 
H 4 HOH B 99 6231 6231 HOH HOH . 
H 4 HOH B 100 6232 6232 HOH HOH . 
H 4 HOH B 101 6233 6233 HOH HOH . 
H 4 HOH B 102 6234 6234 HOH HOH . 
H 4 HOH B 103 6235 6235 HOH HOH . 
H 4 HOH B 104 6236 6236 HOH HOH . 
H 4 HOH B 105 6237 6237 HOH HOH . 
H 4 HOH B 106 6238 6238 HOH HOH . 
H 4 HOH B 107 6239 6239 HOH HOH . 
H 4 HOH B 108 6240 6240 HOH HOH . 
H 4 HOH B 109 6241 6241 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               39.198 
_atom_site.Cartn_y               -7.686 
_atom_site.Cartn_z               11.898 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        47 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           4611 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           269 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#