data_1JNU
#
_model_server_result.job_id            WuctO7MA5TsgvC_K49w9-w 
_model_server_result.datetime_utc      '2024-11-09 02:51:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1jnu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":1033}' 
#
_entry.id    1JNU 
#
_exptl.entry_id    1JNU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         93.14 
_cell.angle_beta          93.79 
_cell.angle_gamma         90.4 
_cell.entry_id            1JNU 
_cell.length_a            44.843 
_cell.length_b            54.771 
_cell.length_c            70.963 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1JNU 
_symmetry.cell_setting             triclinic 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,I 1 1 
B,F,J 2 1 
C,G,K 3 1 
D,H,L 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 38 A CYS 966 1_555 E C4A FMN . A FMN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? 
covale ? covale2 B SG CYS 38 B CYS 966 1_555 F C4A FMN . B FMN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.812 ? 
covale ? covale3 C SG CYS 38 C CYS 966 1_555 G C4A FMN . C FMN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? 
covale ? covale4 D SG CYS 38 D CYS 966 1_555 H C4A FMN . D FMN 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 83 n n 
N1 C10 FMN doub 84 n n 
C2 O2 FMN doub 85 n n 
C2 N3 FMN sing 86 n n 
N3 C4 FMN sing 87 n n 
N3 HN3 FMN sing 88 n n 
C4 O4 FMN doub 89 n n 
C4 C4A FMN sing 90 n n 
C4A N5 FMN doub 91 n n 
C4A C10 FMN sing 92 n n 
N5 C5A FMN sing 93 n n 
C5A C6 FMN doub 94 n y 
C5A C9A FMN sing 95 n y 
C6 C7 FMN sing 96 n y 
C6 H6 FMN sing 97 n n 
C7 C7M FMN sing 98 n n 
C7 C8 FMN doub 99 n y 
C7M HM71 FMN sing 100 n n 
C7M HM72 FMN sing 101 n n 
C7M HM73 FMN sing 102 n n 
C8 C8M FMN sing 103 n n 
C8 C9 FMN sing 104 n y 
C8M HM81 FMN sing 105 n n 
C8M HM82 FMN sing 106 n n 
C8M HM83 FMN sing 107 n n 
C9 C9A FMN doub 108 n y 
C9 H9 FMN sing 109 n n 
C9A N10 FMN sing 110 n n 
N10 C10 FMN sing 111 n n 
N10 C1' FMN sing 112 n n 
C1' C2' FMN sing 113 n n 
C1' "H1'1" FMN sing 114 n n 
C1' "H1'2" FMN sing 115 n n 
C2' O2' FMN sing 116 n n 
C2' C3' FMN sing 117 n n 
C2' H2' FMN sing 118 n n 
O2' HO2' FMN sing 119 n n 
C3' O3' FMN sing 120 n n 
C3' C4' FMN sing 121 n n 
C3' H3' FMN sing 122 n n 
O3' HO3' FMN sing 123 n n 
C4' O4' FMN sing 124 n n 
C4' C5' FMN sing 125 n n 
C4' H4' FMN sing 126 n n 
O4' HO4' FMN sing 127 n n 
C5' O5' FMN sing 128 n n 
C5' "H5'1" FMN sing 129 n n 
C5' "H5'2" FMN sing 130 n n 
O5' P FMN sing 131 n n 
P O1P FMN doub 132 n n 
P O2P FMN sing 133 n n 
P O3P FMN sing 134 n n 
O2P HOP2 FMN sing 135 n n 
O3P HOP3 FMN sing 136 n n 
#
_atom_sites.entry_id                     1JNU 
_atom_sites.fract_transf_matrix[1][1]    0.0223 
_atom_sites.fract_transf_matrix[1][2]    0.000157 
_atom_sites.fract_transf_matrix[1][3]    0.001488 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018258 
_atom_sites.fract_transf_matrix[2][3]    0.001012 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014144 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 FMN A 1 1033 1033 FMN FMN . 
F 2 FMN B 1 1033 1033 FMN FMN . 
G 2 FMN C 1 1033 1033 FMN FMN . 
H 2 FMN D 1 1033 1033 FMN FMN . 
I 3 HOH A 1 12 12 HOH HOH . 
I 3 HOH A 2 13 13 HOH HOH . 
I 3 HOH A 3 18 18 HOH HOH . 
I 3 HOH A 4 19 19 HOH HOH . 
I 3 HOH A 5 23 23 HOH HOH . 
I 3 HOH A 6 25 25 HOH HOH . 
I 3 HOH A 7 27 27 HOH HOH . 
I 3 HOH A 8 34 34 HOH HOH . 
I 3 HOH A 9 38 38 HOH HOH . 
I 3 HOH A 10 40 40 HOH HOH . 
I 3 HOH A 11 41 41 HOH HOH . 
I 3 HOH A 12 43 43 HOH HOH . 
I 3 HOH A 13 46 46 HOH HOH . 
I 3 HOH A 14 53 53 HOH HOH . 
I 3 HOH A 15 63 63 HOH HOH . 
J 3 HOH B 1 6 6 HOH HOH . 
J 3 HOH B 2 7 7 HOH HOH . 
J 3 HOH B 3 9 9 HOH HOH . 
J 3 HOH B 4 16 16 HOH HOH . 
J 3 HOH B 5 17 17 HOH HOH . 
J 3 HOH B 6 20 20 HOH HOH . 
J 3 HOH B 7 26 26 HOH HOH . 
J 3 HOH B 8 29 29 HOH HOH . 
J 3 HOH B 9 32 32 HOH HOH . 
J 3 HOH B 10 47 47 HOH HOH . 
J 3 HOH B 11 48 48 HOH HOH . 
J 3 HOH B 12 52 52 HOH HOH . 
J 3 HOH B 13 58 58 HOH HOH . 
J 3 HOH B 14 62 62 HOH HOH . 
J 3 HOH B 15 64 64 HOH HOH . 
K 3 HOH C 1 1 1 HOH HOH . 
K 3 HOH C 2 2 2 HOH HOH . 
K 3 HOH C 3 3 3 HOH HOH . 
K 3 HOH C 4 4 4 HOH HOH . 
K 3 HOH C 5 5 5 HOH HOH . 
K 3 HOH C 6 15 15 HOH HOH . 
K 3 HOH C 7 22 22 HOH HOH . 
K 3 HOH C 8 24 24 HOH HOH . 
K 3 HOH C 9 28 28 HOH HOH . 
K 3 HOH C 10 30 30 HOH HOH . 
K 3 HOH C 11 35 35 HOH HOH . 
K 3 HOH C 12 36 36 HOH HOH . 
K 3 HOH C 13 44 44 HOH HOH . 
K 3 HOH C 14 55 55 HOH HOH . 
K 3 HOH C 15 56 56 HOH HOH . 
K 3 HOH C 16 60 60 HOH HOH . 
K 3 HOH C 17 65 65 HOH HOH . 
L 3 HOH D 1 8 8 HOH HOH . 
L 3 HOH D 2 10 10 HOH HOH . 
L 3 HOH D 3 11 11 HOH HOH . 
L 3 HOH D 4 14 14 HOH HOH . 
L 3 HOH D 5 21 21 HOH HOH . 
L 3 HOH D 6 31 31 HOH HOH . 
L 3 HOH D 7 33 33 HOH HOH . 
L 3 HOH D 8 37 37 HOH HOH . 
L 3 HOH D 9 39 39 HOH HOH . 
L 3 HOH D 10 42 42 HOH HOH . 
L 3 HOH D 11 45 45 HOH HOH . 
L 3 HOH D 12 49 49 HOH HOH . 
L 3 HOH D 13 50 50 HOH HOH . 
L 3 HOH D 14 51 51 HOH HOH . 
L 3 HOH D 15 54 54 HOH HOH . 
L 3 HOH D 16 57 57 HOH HOH . 
L 3 HOH D 17 59 59 HOH HOH . 
L 3 HOH D 18 61 61 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . F 2 28.344 9.449 19.77 1 44.12 ? N1 FMN 1033 B 1 
HETATM 2 C C2 FMN . . . F 2 29.615 9.137 19.354 1 47.29 ? C2 FMN 1033 B 1 
HETATM 3 O O2 FMN . . . F 2 29.847 8.744 18.235 1 49.34 ? O2 FMN 1033 B 1 
HETATM 4 N N3 FMN . . . F 2 30.71 9.254 20.282 1 47.78 ? N3 FMN 1033 B 1 
HETATM 5 C C4 FMN . . . F 2 30.563 9.718 21.564 1 47.54 ? C4 FMN 1033 B 1 
HETATM 6 O O4 FMN . . . F 2 31.494 9.731 22.345 1 49.63 ? O4 FMN 1033 B 1 
HETATM 7 C C4A FMN . . . F 2 29.25 10.417 21.889 1 45.43 ? C4A FMN 1033 B 1 
HETATM 8 N N5 FMN . . . F 2 28.937 10.314 23.296 1 43.5 ? N5 FMN 1033 B 1 
HETATM 9 C C5A FMN . . . F 2 27.636 10.629 23.728 1 42.54 ? C5A FMN 1033 B 1 
HETATM 10 C C6 FMN . . . F 2 27.361 11.031 25.059 1 41.87 ? C6 FMN 1033 B 1 
HETATM 11 C C7 FMN . . . F 2 26.059 11.331 25.508 1 43.69 ? C7 FMN 1033 B 1 
HETATM 12 C C7M FMN . . . F 2 25.861 11.755 26.947 1 47.32 ? C7M FMN 1033 B 1 
HETATM 13 C C8 FMN . . . F 2 24.968 11.219 24.581 1 43.88 ? C8 FMN 1033 B 1 
HETATM 14 C C8M FMN . . . F 2 23.533 11.513 24.94 1 44.26 ? C8M FMN 1033 B 1 
HETATM 15 C C9 FMN . . . F 2 25.224 10.817 23.258 1 44.34 ? C9 FMN 1033 B 1 
HETATM 16 C C9A FMN . . . F 2 26.541 10.525 22.809 1 44.35 ? C9A FMN 1033 B 1 
HETATM 17 N N10 FMN . . . F 2 26.839 10.11 21.43 1 44.49 ? N10 FMN 1033 B 1 
HETATM 18 C C10 FMN . . . F 2 28.114 9.869 21.006 1 44.2 ? C10 FMN 1033 B 1 
HETATM 19 C C1' FMN . . . F 2 25.719 9.934 20.478 1 41.63 ? C1' FMN 1033 B 1 
HETATM 20 C C2' FMN . . . F 2 25.423 11.103 19.549 1 40.49 ? C2' FMN 1033 B 1 
HETATM 21 O O2' FMN . . . F 2 25.402 12.373 20.19 1 42.02 ? O2' FMN 1033 B 1 
HETATM 22 C C3' FMN . . . F 2 24.047 10.868 18.883 1 38.63 ? C3' FMN 1033 B 1 
HETATM 23 O O3' FMN . . . F 2 23.085 10.474 19.927 1 38.97 ? O3' FMN 1033 B 1 
HETATM 24 C C4' FMN . . . F 2 24.073 9.776 17.834 1 38.52 ? C4' FMN 1033 B 1 
HETATM 25 O O4' FMN . . . F 2 25.009 10.121 16.798 1 39.18 ? O4' FMN 1033 B 1 
HETATM 26 C C5' FMN . . . F 2 22.727 9.473 17.166 1 36.48 ? C5' FMN 1033 B 1 
HETATM 27 O O5' FMN . . . F 2 21.978 10.681 16.895 1 38.87 ? O5' FMN 1033 B 1 
HETATM 28 P P FMN . . . F 2 21.993 11.411 15.484 1 40.15 ? P FMN 1033 B 1 
HETATM 29 O O1P FMN . . . F 2 23.427 11.739 15.136 1 37.13 ? O1P FMN 1033 B 1 
HETATM 30 O O2P FMN . . . F 2 21.12 12.637 15.578 1 37.44 ? O2P FMN 1033 B 1 
HETATM 31 O O3P FMN . . . F 2 21.429 10.32 14.51 1 39.18 ? O3P FMN 1033 B 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           339 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           31 
#