data_1JOE # _model_server_result.job_id 3ZiGLVqOz79zDrNZ2RBGYw _model_server_result.datetime_utc '2025-03-06 09:36:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1joe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":208}' # _entry.id 1JOE # _exptl.entry_id 1JOE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JOE _cell.length_a 115.53 _cell.length_b 115.53 _cell.length_c 51.23 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JOE _symmetry.cell_setting ? _symmetry.Int_Tables_number 77 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O PHE 40 A PHE 40 1_555 E HG HG . A HG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.422 ? metalc ? metalc2 A SG CYS 41 A CYS 41 1_555 E HG HG . A HG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.4 ? metalc ? metalc3 A NE2 HIS 54 A HIS 54 1_555 F ZN ZN . A ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc4 A NE2 HIS 58 A HIS 58 1_555 F ZN ZN . A ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc5 A SG CYS 128 A CYS 128 1_555 F ZN ZN . A ZN 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.535 ? metalc ? metalc6 E HG HG . A HG 201 1_555 M O HOH . A HOH 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? metalc ? metalc7 F ZN ZN . A ZN 205 1_555 M O HOH . A HOH 231 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? metalc ? metalc8 B SG CYS 41 B CYS 41 1_555 G HG HG . B HG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc9 B OE2 GLU 46 B GLU 46 1_555 G HG HG . B HG 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.188 ? metalc ? metalc10 B NE2 HIS 54 B HIS 54 1_555 H ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc11 B NE2 HIS 58 B HIS 58 1_555 H ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc12 B SG CYS 128 B CYS 128 1_555 H ZN ZN . B ZN 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc13 G HG HG . B HG 202 1_555 N O HOH . B HOH 213 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.7 ? metalc ? metalc14 H ZN ZN . B ZN 206 1_555 N O HOH . B HOH 236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc15 C SG CYS 41 C CYS 41 1_555 I HG HG . C HG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc16 C OE1 GLU 46 C GLU 46 1_555 I HG HG . C HG 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? metalc ? metalc17 C NE2 HIS 54 C HIS 54 1_555 J ZN ZN . C ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.374 ? metalc ? metalc18 C NE2 HIS 58 C HIS 58 1_555 J ZN ZN . C ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc19 C SG CYS 128 C CYS 128 1_555 J ZN ZN . C ZN 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.88 ? metalc ? metalc20 D SG CYS 41 D CYS 41 1_555 K HG HG . D HG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc21 D OE2 GLU 46 D GLU 46 1_555 K HG HG . D HG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.972 ? metalc ? metalc22 D NE2 HIS 54 D HIS 54 1_555 L ZN ZN . D ZN 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc23 D NE2 HIS 58 D HIS 58 1_555 L ZN ZN . D ZN 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.626 ? metalc ? metalc24 D ND2 ASN 145 D ASN 145 1_555 K HG HG . D HG 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.102 ? metalc ? metalc25 K HG HG . D HG 204 1_555 P O HOH . D HOH 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1JOE _atom_sites.fract_transf_matrix[1][1] 0.008656 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008656 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01952 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HG A 1 201 201 HG HG . F 3 ZN A 1 205 205 ZN ZN . G 2 HG B 1 202 202 HG HG . H 3 ZN B 1 206 206 ZN ZN . I 2 HG C 1 203 203 HG HG . J 3 ZN C 1 207 207 ZN ZN . K 2 HG D 1 204 204 HG HG . L 3 ZN D 1 208 208 ZN ZN . M 4 HOH A 1 206 10 HOH HOH . M 4 HOH A 2 207 11 HOH HOH . M 4 HOH A 3 208 14 HOH HOH . M 4 HOH A 4 209 16 HOH HOH . M 4 HOH A 5 210 21 HOH HOH . M 4 HOH A 6 211 23 HOH HOH . M 4 HOH A 7 212 35 HOH HOH . M 4 HOH A 8 213 37 HOH HOH . M 4 HOH A 9 214 38 HOH HOH . M 4 HOH A 10 215 39 HOH HOH . M 4 HOH A 11 216 41 HOH HOH . M 4 HOH A 12 217 43 HOH HOH . M 4 HOH A 13 218 50 HOH HOH . M 4 HOH A 14 219 56 HOH HOH . M 4 HOH A 15 220 58 HOH HOH . M 4 HOH A 16 221 59 HOH HOH . M 4 HOH A 17 222 60 HOH HOH . M 4 HOH A 18 223 61 HOH HOH . M 4 HOH A 19 224 62 HOH HOH . M 4 HOH A 20 225 64 HOH HOH . M 4 HOH A 21 226 68 HOH HOH . M 4 HOH A 22 227 77 HOH HOH . M 4 HOH A 23 228 84 HOH HOH . M 4 HOH A 24 229 88 HOH HOH . M 4 HOH A 25 230 91 HOH HOH . M 4 HOH A 26 231 93 HOH HOH . M 4 HOH A 27 232 100 HOH HOH . M 4 HOH A 28 233 117 HOH HOH . M 4 HOH A 29 234 126 HOH HOH . M 4 HOH A 30 235 127 HOH HOH . M 4 HOH A 31 236 130 HOH HOH . M 4 HOH A 32 237 132 HOH HOH . N 4 HOH B 1 207 2 HOH HOH . N 4 HOH B 2 208 19 HOH HOH . N 4 HOH B 3 209 28 HOH HOH . N 4 HOH B 4 210 31 HOH HOH . N 4 HOH B 5 211 32 HOH HOH . N 4 HOH B 6 212 34 HOH HOH . N 4 HOH B 7 213 40 HOH HOH . N 4 HOH B 8 214 46 HOH HOH . N 4 HOH B 9 215 47 HOH HOH . N 4 HOH B 10 216 49 HOH HOH . N 4 HOH B 11 217 52 HOH HOH . N 4 HOH B 12 218 65 HOH HOH . N 4 HOH B 13 219 70 HOH HOH . N 4 HOH B 14 220 71 HOH HOH . N 4 HOH B 15 221 76 HOH HOH . N 4 HOH B 16 222 79 HOH HOH . N 4 HOH B 17 223 80 HOH HOH . N 4 HOH B 18 224 87 HOH HOH . N 4 HOH B 19 225 94 HOH HOH . N 4 HOH B 20 226 99 HOH HOH . N 4 HOH B 21 227 106 HOH HOH . N 4 HOH B 22 228 108 HOH HOH . N 4 HOH B 23 229 109 HOH HOH . N 4 HOH B 24 230 111 HOH HOH . N 4 HOH B 25 231 112 HOH HOH . N 4 HOH B 26 232 113 HOH HOH . N 4 HOH B 27 233 114 HOH HOH . N 4 HOH B 28 234 115 HOH HOH . N 4 HOH B 29 235 116 HOH HOH . N 4 HOH B 30 236 123 HOH HOH . N 4 HOH B 31 237 125 HOH HOH . N 4 HOH B 32 238 129 HOH HOH . N 4 HOH B 33 239 131 HOH HOH . O 4 HOH C 1 208 1 HOH HOH . O 4 HOH C 2 209 4 HOH HOH . O 4 HOH C 3 210 6 HOH HOH . O 4 HOH C 4 211 9 HOH HOH . O 4 HOH C 5 212 13 HOH HOH . O 4 HOH C 6 213 15 HOH HOH . O 4 HOH C 7 214 17 HOH HOH . O 4 HOH C 8 215 18 HOH HOH . O 4 HOH C 9 216 20 HOH HOH . O 4 HOH C 10 217 30 HOH HOH . O 4 HOH C 11 218 36 HOH HOH . O 4 HOH C 12 219 42 HOH HOH . O 4 HOH C 13 220 44 HOH HOH . O 4 HOH C 14 221 57 HOH HOH . O 4 HOH C 15 222 63 HOH HOH . O 4 HOH C 16 223 66 HOH HOH . O 4 HOH C 17 224 67 HOH HOH . O 4 HOH C 18 225 69 HOH HOH . O 4 HOH C 19 226 73 HOH HOH . O 4 HOH C 20 227 74 HOH HOH . O 4 HOH C 21 228 78 HOH HOH . O 4 HOH C 22 229 81 HOH HOH . O 4 HOH C 23 230 83 HOH HOH . O 4 HOH C 24 231 86 HOH HOH . O 4 HOH C 25 232 89 HOH HOH . O 4 HOH C 26 233 90 HOH HOH . O 4 HOH C 27 234 95 HOH HOH . O 4 HOH C 28 235 97 HOH HOH . O 4 HOH C 29 236 98 HOH HOH . O 4 HOH C 30 237 101 HOH HOH . O 4 HOH C 31 238 102 HOH HOH . O 4 HOH C 32 239 104 HOH HOH . O 4 HOH C 33 240 107 HOH HOH . O 4 HOH C 34 241 110 HOH HOH . O 4 HOH C 35 242 119 HOH HOH . O 4 HOH C 36 243 122 HOH HOH . O 4 HOH C 37 244 124 HOH HOH . P 4 HOH D 1 209 3 HOH HOH . P 4 HOH D 2 210 5 HOH HOH . P 4 HOH D 3 211 7 HOH HOH . P 4 HOH D 4 212 8 HOH HOH . P 4 HOH D 5 213 12 HOH HOH . P 4 HOH D 6 214 22 HOH HOH . P 4 HOH D 7 215 24 HOH HOH . P 4 HOH D 8 216 25 HOH HOH . P 4 HOH D 9 217 26 HOH HOH . P 4 HOH D 10 218 27 HOH HOH . P 4 HOH D 11 219 29 HOH HOH . P 4 HOH D 12 220 33 HOH HOH . P 4 HOH D 13 221 45 HOH HOH . P 4 HOH D 14 222 48 HOH HOH . P 4 HOH D 15 223 51 HOH HOH . P 4 HOH D 16 224 53 HOH HOH . P 4 HOH D 17 225 54 HOH HOH . P 4 HOH D 18 226 55 HOH HOH . P 4 HOH D 19 227 72 HOH HOH . P 4 HOH D 20 228 75 HOH HOH . P 4 HOH D 21 229 82 HOH HOH . P 4 HOH D 22 230 85 HOH HOH . P 4 HOH D 23 231 92 HOH HOH . P 4 HOH D 24 232 96 HOH HOH . P 4 HOH D 25 233 103 HOH HOH . P 4 HOH D 26 234 105 HOH HOH . P 4 HOH D 27 235 118 HOH HOH . P 4 HOH D 28 236 120 HOH HOH . P 4 HOH D 29 237 121 HOH HOH . P 4 HOH D 30 238 128 HOH HOH . P 4 HOH D 31 239 133 HOH HOH . P 4 HOH D 32 240 134 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 32.733 _atom_site.Cartn_y 66.147 _atom_site.Cartn_z 33.802 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 48.08 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 208 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #