data_1JOM # _model_server_result.job_id -D6P19kR3FOxsRPln0ON6w _model_server_result.datetime_utc '2024-10-19 09:26:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jom # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":164}' # _entry.id 1JOM # _exptl.entry_id 1JOM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1JOM _cell.length_a 96.862 _cell.length_b 96.862 _cell.length_c 35.022 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JOM _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 17 A GLU 17 1_555 C CA CA . A CA 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.005 ? metalc ? metalc2 A O MET 20 A MET 20 1_555 C CA CA . A CA 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.645 ? metalc ? metalc3 C CA CA . A CA 164 1_555 G O EOH . A EOH 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc4 C CA CA . A CA 164 1_555 H O HOH . A HOH 246 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.007 ? metalc ? metalc5 C CA CA . A CA 164 1_555 H O HOH . A HOH 266 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.072 ? metalc ? metalc6 C CA CA . A CA 164 1_555 H O HOH . A HOH 432 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? metalc ? metalc7 C CA CA . A CA 164 1_555 H O HOH . A HOH 440 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 3.241 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1JOM _atom_sites.fract_transf_matrix[1][1] 0.010324 _atom_sites.fract_transf_matrix[1][2] 0.005961 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011921 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028553 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL A 1 163 163 CL CL . C 3 CA A 1 164 164 CA CA . D 4 FFO A 1 161 161 FFO FFO . E 5 EOH A 1 171 171 EOH EOH . F 5 EOH A 1 173 173 EOH EOH . G 5 EOH A 1 174 174 EOH EOH . H 6 HOH A 1 206 206 HOH HOH . H 6 HOH A 2 207 207 HOH HOH . H 6 HOH A 3 208 208 HOH HOH . H 6 HOH A 4 209 209 HOH HOH . H 6 HOH A 5 210 210 HOH HOH . H 6 HOH A 6 211 211 HOH HOH . H 6 HOH A 7 212 212 HOH HOH . H 6 HOH A 8 213 213 HOH HOH . H 6 HOH A 9 216 216 HOH HOH . H 6 HOH A 10 217 217 HOH HOH . H 6 HOH A 11 218 218 HOH HOH . H 6 HOH A 12 219 219 HOH HOH . H 6 HOH A 13 225 225 HOH HOH . H 6 HOH A 14 226 226 HOH HOH . H 6 HOH A 15 229 229 HOH HOH . H 6 HOH A 16 232 232 HOH HOH . H 6 HOH A 17 235 235 HOH HOH . H 6 HOH A 18 237 237 HOH HOH . H 6 HOH A 19 238 238 HOH HOH . H 6 HOH A 20 239 239 HOH HOH . H 6 HOH A 21 242 242 HOH HOH . H 6 HOH A 22 243 243 HOH HOH . H 6 HOH A 23 246 246 HOH HOH . H 6 HOH A 24 248 248 HOH HOH . H 6 HOH A 25 249 249 HOH HOH . H 6 HOH A 26 251 251 HOH HOH . H 6 HOH A 27 252 252 HOH HOH . H 6 HOH A 28 253 253 HOH HOH . H 6 HOH A 29 254 254 HOH HOH . H 6 HOH A 30 255 255 HOH HOH . H 6 HOH A 31 256 256 HOH HOH . H 6 HOH A 32 257 257 HOH HOH . H 6 HOH A 33 260 260 HOH HOH . H 6 HOH A 34 262 262 HOH HOH . H 6 HOH A 35 263 263 HOH HOH . H 6 HOH A 36 264 264 HOH HOH . H 6 HOH A 37 265 265 HOH HOH . H 6 HOH A 38 266 266 HOH HOH . H 6 HOH A 39 268 268 HOH HOH . H 6 HOH A 40 269 269 HOH HOH . H 6 HOH A 41 273 273 HOH HOH . H 6 HOH A 42 276 276 HOH HOH . H 6 HOH A 43 278 278 HOH HOH . H 6 HOH A 44 285 285 HOH HOH . H 6 HOH A 45 286 286 HOH HOH . H 6 HOH A 46 287 287 HOH HOH . H 6 HOH A 47 289 289 HOH HOH . H 6 HOH A 48 291 291 HOH HOH . H 6 HOH A 49 292 292 HOH HOH . H 6 HOH A 50 293 293 HOH HOH . H 6 HOH A 51 294 294 HOH HOH . H 6 HOH A 52 296 296 HOH HOH . H 6 HOH A 53 297 297 HOH HOH . H 6 HOH A 54 298 298 HOH HOH . H 6 HOH A 55 299 299 HOH HOH . H 6 HOH A 56 300 300 HOH HOH . H 6 HOH A 57 301 301 HOH HOH . H 6 HOH A 58 302 302 HOH HOH . H 6 HOH A 59 304 304 HOH HOH . H 6 HOH A 60 305 305 HOH HOH . H 6 HOH A 61 306 306 HOH HOH . H 6 HOH A 62 307 307 HOH HOH . H 6 HOH A 63 308 308 HOH HOH . H 6 HOH A 64 309 309 HOH HOH . H 6 HOH A 65 311 311 HOH HOH . H 6 HOH A 66 313 313 HOH HOH . H 6 HOH A 67 314 314 HOH HOH . H 6 HOH A 68 318 318 HOH HOH . H 6 HOH A 69 319 319 HOH HOH . H 6 HOH A 70 320 320 HOH HOH . H 6 HOH A 71 321 321 HOH HOH . H 6 HOH A 72 322 322 HOH HOH . H 6 HOH A 73 323 323 HOH HOH . H 6 HOH A 74 324 324 HOH HOH . H 6 HOH A 75 325 325 HOH HOH . H 6 HOH A 76 327 327 HOH HOH . H 6 HOH A 77 328 328 HOH HOH . H 6 HOH A 78 331 331 HOH HOH . H 6 HOH A 79 332 332 HOH HOH . H 6 HOH A 80 333 333 HOH HOH . H 6 HOH A 81 334 334 HOH HOH . H 6 HOH A 82 335 335 HOH HOH . H 6 HOH A 83 336 336 HOH HOH . H 6 HOH A 84 337 337 HOH HOH . H 6 HOH A 85 338 338 HOH HOH . H 6 HOH A 86 339 339 HOH HOH . H 6 HOH A 87 341 341 HOH HOH . H 6 HOH A 88 342 342 HOH HOH . H 6 HOH A 89 343 343 HOH HOH . H 6 HOH A 90 344 344 HOH HOH . H 6 HOH A 91 345 345 HOH HOH . H 6 HOH A 92 346 346 HOH HOH . H 6 HOH A 93 347 347 HOH HOH . H 6 HOH A 94 348 348 HOH HOH . H 6 HOH A 95 349 349 HOH HOH . H 6 HOH A 96 352 352 HOH HOH . H 6 HOH A 97 353 353 HOH HOH . H 6 HOH A 98 354 354 HOH HOH . H 6 HOH A 99 355 355 HOH HOH . H 6 HOH A 100 356 356 HOH HOH . H 6 HOH A 101 357 357 HOH HOH . H 6 HOH A 102 358 358 HOH HOH . H 6 HOH A 103 359 359 HOH HOH . H 6 HOH A 104 360 360 HOH HOH . H 6 HOH A 105 362 362 HOH HOH . H 6 HOH A 106 363 363 HOH HOH . H 6 HOH A 107 364 364 HOH HOH . H 6 HOH A 108 366 366 HOH HOH . H 6 HOH A 109 367 367 HOH HOH . H 6 HOH A 110 368 368 HOH HOH . H 6 HOH A 111 369 369 HOH HOH . H 6 HOH A 112 370 370 HOH HOH . H 6 HOH A 113 371 371 HOH HOH . H 6 HOH A 114 372 372 HOH HOH . H 6 HOH A 115 373 373 HOH HOH . H 6 HOH A 116 374 374 HOH HOH . H 6 HOH A 117 375 375 HOH HOH . H 6 HOH A 118 376 376 HOH HOH . H 6 HOH A 119 377 377 HOH HOH . H 6 HOH A 120 378 378 HOH HOH . H 6 HOH A 121 379 379 HOH HOH . H 6 HOH A 122 380 380 HOH HOH . H 6 HOH A 123 383 383 HOH HOH . H 6 HOH A 124 384 384 HOH HOH . H 6 HOH A 125 385 385 HOH HOH . H 6 HOH A 126 386 386 HOH HOH . H 6 HOH A 127 387 387 HOH HOH . H 6 HOH A 128 388 388 HOH HOH . H 6 HOH A 129 389 389 HOH HOH . H 6 HOH A 130 390 390 HOH HOH . H 6 HOH A 131 391 391 HOH HOH . H 6 HOH A 132 392 392 HOH HOH . H 6 HOH A 133 393 393 HOH HOH . H 6 HOH A 134 394 394 HOH HOH . H 6 HOH A 135 396 396 HOH HOH . H 6 HOH A 136 397 397 HOH HOH . H 6 HOH A 137 398 398 HOH HOH . H 6 HOH A 138 399 399 HOH HOH . H 6 HOH A 139 400 400 HOH HOH . H 6 HOH A 140 402 402 HOH HOH . H 6 HOH A 141 403 403 HOH HOH . H 6 HOH A 142 404 404 HOH HOH . H 6 HOH A 143 406 406 HOH HOH . H 6 HOH A 144 407 407 HOH HOH . H 6 HOH A 145 408 408 HOH HOH . H 6 HOH A 146 409 409 HOH HOH . H 6 HOH A 147 410 410 HOH HOH . H 6 HOH A 148 411 411 HOH HOH . H 6 HOH A 149 412 412 HOH HOH . H 6 HOH A 150 413 413 HOH HOH . H 6 HOH A 151 414 414 HOH HOH . H 6 HOH A 152 415 415 HOH HOH . H 6 HOH A 153 416 416 HOH HOH . H 6 HOH A 154 417 417 HOH HOH . H 6 HOH A 155 419 419 HOH HOH . H 6 HOH A 156 420 420 HOH HOH . H 6 HOH A 157 421 421 HOH HOH . H 6 HOH A 158 422 422 HOH HOH . H 6 HOH A 159 425 425 HOH HOH . H 6 HOH A 160 426 426 HOH HOH . H 6 HOH A 161 427 427 HOH HOH . H 6 HOH A 162 428 428 HOH HOH . H 6 HOH A 163 429 429 HOH HOH . H 6 HOH A 164 430 430 HOH HOH . H 6 HOH A 165 431 431 HOH HOH . H 6 HOH A 166 432 432 HOH HOH . H 6 HOH A 167 434 434 HOH HOH . H 6 HOH A 168 435 435 HOH HOH . H 6 HOH A 169 437 437 HOH HOH . H 6 HOH A 170 438 438 HOH HOH . H 6 HOH A 171 439 439 HOH HOH . H 6 HOH A 172 440 440 HOH HOH . H 6 HOH A 173 442 442 HOH HOH . H 6 HOH A 174 446 446 HOH HOH . H 6 HOH A 175 447 447 HOH HOH . H 6 HOH A 176 448 448 HOH HOH . H 6 HOH A 177 449 449 HOH HOH . H 6 HOH A 178 450 450 HOH HOH . H 6 HOH A 179 452 452 HOH HOH . H 6 HOH A 180 453 453 HOH HOH . H 6 HOH A 181 454 454 HOH HOH . H 6 HOH A 182 455 455 HOH HOH . H 6 HOH A 183 456 456 HOH HOH . H 6 HOH A 184 457 457 HOH HOH . H 6 HOH A 185 458 458 HOH HOH . H 6 HOH A 186 459 459 HOH HOH . H 6 HOH A 187 460 460 HOH HOH . H 6 HOH A 188 461 461 HOH HOH . H 6 HOH A 189 462 462 HOH HOH . H 6 HOH A 190 463 463 HOH HOH . H 6 HOH A 191 464 464 HOH HOH . H 6 HOH A 192 466 466 HOH HOH . H 6 HOH A 193 467 467 HOH HOH . H 6 HOH A 194 468 468 HOH HOH . H 6 HOH A 195 469 469 HOH HOH . H 6 HOH A 196 470 470 HOH HOH . H 6 HOH A 197 471 471 HOH HOH . H 6 HOH A 198 473 473 HOH HOH . H 6 HOH A 199 474 474 HOH HOH . H 6 HOH A 200 475 475 HOH HOH . H 6 HOH A 201 477 477 HOH HOH . H 6 HOH A 202 479 479 HOH HOH . H 6 HOH A 203 482 482 HOH HOH . H 6 HOH A 204 483 483 HOH HOH . H 6 HOH A 205 484 484 HOH HOH . H 6 HOH A 206 485 485 HOH HOH . H 6 HOH A 207 486 486 HOH HOH . H 6 HOH A 208 487 487 HOH HOH . H 6 HOH A 209 488 488 HOH HOH . H 6 HOH A 210 489 489 HOH HOH . H 6 HOH A 211 490 490 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 8.952 _atom_site.Cartn_y 38.237 _atom_site.Cartn_z 32.17 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.29 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 164 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #