data_1JPV
#
_model_server_result.job_id            rx-lzl0HDefHDNUKYd53HA 
_model_server_result.datetime_utc      '2024-10-12 06:25:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1jpv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":3250}' 
#
_entry.id    1JPV 
#
_exptl.entry_id    1JPV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            1JPV 
_cell.length_a            102.1 
_cell.length_b            174.31 
_cell.length_c            86.97 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 1JPV 
_symmetry.cell_setting             orthorhombic 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 3_655 -x+1,y,-z+1/2 -1 0 0 0 1 0 0 0 -1 102.1 0 43.485 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 125 A CYS 125 1_555 C SG CYS 125 C CYS 125 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf2 B SG CYS 125 B CYS 125 1_555 B SG CYS 125 B CYS 125 3_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 290 n n 
S O2 SO4 doub 291 n n 
S O3 SO4 sing 292 n n 
S O4 SO4 sing 293 n n 
#
_atom_sites.entry_id                     1JPV 
_atom_sites.fract_transf_matrix[1][1]    0.009794 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005737 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011498 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 SO4 A 1 1250 1250 SO4 SO4 . 
E 2 SO4 B 1 2250 2250 SO4 SO4 . 
F 2 SO4 C 1 3250 3250 SO4 SO4 . 
G 3 HOH A 1 303 303 HOH HOH . 
G 3 HOH A 2 307 307 HOH HOH . 
G 3 HOH A 3 309 309 HOH HOH . 
G 3 HOH A 4 311 311 HOH HOH . 
G 3 HOH A 5 314 314 HOH HOH . 
G 3 HOH A 6 315 315 HOH HOH . 
G 3 HOH A 7 316 316 HOH HOH . 
G 3 HOH A 8 318 318 HOH HOH . 
G 3 HOH A 9 322 322 HOH HOH . 
G 3 HOH A 10 326 326 HOH HOH . 
G 3 HOH A 11 328 328 HOH HOH . 
G 3 HOH A 12 330 330 HOH HOH . 
G 3 HOH A 13 331 331 HOH HOH . 
G 3 HOH A 14 337 337 HOH HOH . 
G 3 HOH A 15 338 338 HOH HOH . 
G 3 HOH A 16 340 340 HOH HOH . 
G 3 HOH A 17 345 345 HOH HOH . 
G 3 HOH A 18 346 346 HOH HOH . 
G 3 HOH A 19 354 354 HOH HOH . 
G 3 HOH A 20 356 356 HOH HOH . 
G 3 HOH A 21 357 357 HOH HOH . 
G 3 HOH A 22 362 362 HOH HOH . 
G 3 HOH A 23 364 364 HOH HOH . 
G 3 HOH A 24 365 365 HOH HOH . 
G 3 HOH A 25 369 369 HOH HOH . 
G 3 HOH A 26 370 370 HOH HOH . 
G 3 HOH A 27 372 372 HOH HOH . 
G 3 HOH A 28 373 373 HOH HOH . 
G 3 HOH A 29 374 374 HOH HOH . 
G 3 HOH A 30 379 379 HOH HOH . 
G 3 HOH A 31 385 385 HOH HOH . 
G 3 HOH A 32 391 391 HOH HOH . 
G 3 HOH A 33 392 392 HOH HOH . 
G 3 HOH A 34 394 394 HOH HOH . 
G 3 HOH A 35 396 396 HOH HOH . 
G 3 HOH A 36 397 397 HOH HOH . 
G 3 HOH A 37 399 399 HOH HOH . 
G 3 HOH A 38 401 401 HOH HOH . 
G 3 HOH A 39 403 403 HOH HOH . 
G 3 HOH A 40 404 404 HOH HOH . 
G 3 HOH A 41 406 406 HOH HOH . 
G 3 HOH A 42 408 408 HOH HOH . 
G 3 HOH A 43 410 410 HOH HOH . 
G 3 HOH A 44 412 412 HOH HOH . 
G 3 HOH A 45 414 414 HOH HOH . 
G 3 HOH A 46 419 419 HOH HOH . 
G 3 HOH A 47 420 420 HOH HOH . 
G 3 HOH A 48 421 421 HOH HOH . 
G 3 HOH A 49 425 425 HOH HOH . 
G 3 HOH A 50 428 428 HOH HOH . 
G 3 HOH A 51 431 431 HOH HOH . 
G 3 HOH A 52 436 436 HOH HOH . 
G 3 HOH A 53 441 441 HOH HOH . 
G 3 HOH A 54 442 442 HOH HOH . 
G 3 HOH A 55 444 444 HOH HOH . 
G 3 HOH A 56 445 445 HOH HOH . 
G 3 HOH A 57 446 446 HOH HOH . 
G 3 HOH A 58 452 452 HOH HOH . 
G 3 HOH A 59 456 456 HOH HOH . 
G 3 HOH A 60 463 463 HOH HOH . 
G 3 HOH A 61 465 465 HOH HOH . 
G 3 HOH A 62 466 466 HOH HOH . 
G 3 HOH A 63 470 470 HOH HOH . 
G 3 HOH A 64 473 473 HOH HOH . 
G 3 HOH A 65 475 475 HOH HOH . 
G 3 HOH A 66 476 476 HOH HOH . 
G 3 HOH A 67 479 479 HOH HOH . 
G 3 HOH A 68 481 481 HOH HOH . 
G 3 HOH A 69 484 484 HOH HOH . 
G 3 HOH A 70 486 486 HOH HOH . 
G 3 HOH A 71 488 488 HOH HOH . 
G 3 HOH A 72 489 489 HOH HOH . 
G 3 HOH A 73 490 490 HOH HOH . 
G 3 HOH A 74 491 491 HOH HOH . 
G 3 HOH A 75 493 493 HOH HOH . 
G 3 HOH A 76 494 494 HOH HOH . 
G 3 HOH A 77 495 495 HOH HOH . 
G 3 HOH A 78 503 503 HOH HOH . 
G 3 HOH A 79 507 507 HOH HOH . 
G 3 HOH A 80 509 509 HOH HOH . 
G 3 HOH A 81 513 513 HOH HOH . 
G 3 HOH A 82 514 514 HOH HOH . 
G 3 HOH A 83 519 519 HOH HOH . 
G 3 HOH A 84 522 522 HOH HOH . 
G 3 HOH A 85 524 524 HOH HOH . 
G 3 HOH A 86 528 528 HOH HOH . 
G 3 HOH A 87 529 529 HOH HOH . 
G 3 HOH A 88 530 530 HOH HOH . 
G 3 HOH A 89 531 531 HOH HOH . 
G 3 HOH A 90 534 534 HOH HOH . 
G 3 HOH A 91 535 535 HOH HOH . 
G 3 HOH A 92 537 537 HOH HOH . 
G 3 HOH A 93 541 541 HOH HOH . 
G 3 HOH A 94 545 545 HOH HOH . 
G 3 HOH A 95 547 547 HOH HOH . 
G 3 HOH A 96 550 550 HOH HOH . 
G 3 HOH A 97 554 554 HOH HOH . 
G 3 HOH A 98 555 555 HOH HOH . 
G 3 HOH A 99 556 556 HOH HOH . 
G 3 HOH A 100 559 559 HOH HOH . 
H 3 HOH B 1 304 304 HOH HOH . 
H 3 HOH B 2 308 308 HOH HOH . 
H 3 HOH B 3 310 310 HOH HOH . 
H 3 HOH B 4 312 312 HOH HOH . 
H 3 HOH B 5 319 319 HOH HOH . 
H 3 HOH B 6 321 321 HOH HOH . 
H 3 HOH B 7 323 323 HOH HOH . 
H 3 HOH B 8 324 324 HOH HOH . 
H 3 HOH B 9 329 329 HOH HOH . 
H 3 HOH B 10 334 334 HOH HOH . 
H 3 HOH B 11 336 336 HOH HOH . 
H 3 HOH B 12 343 343 HOH HOH . 
H 3 HOH B 13 349 349 HOH HOH . 
H 3 HOH B 14 351 351 HOH HOH . 
H 3 HOH B 15 358 358 HOH HOH . 
H 3 HOH B 16 360 360 HOH HOH . 
H 3 HOH B 17 361 361 HOH HOH . 
H 3 HOH B 18 366 366 HOH HOH . 
H 3 HOH B 19 371 371 HOH HOH . 
H 3 HOH B 20 377 377 HOH HOH . 
H 3 HOH B 21 382 382 HOH HOH . 
H 3 HOH B 22 383 383 HOH HOH . 
H 3 HOH B 23 387 387 HOH HOH . 
H 3 HOH B 24 389 389 HOH HOH . 
H 3 HOH B 25 393 393 HOH HOH . 
H 3 HOH B 26 395 395 HOH HOH . 
H 3 HOH B 27 398 398 HOH HOH . 
H 3 HOH B 28 405 405 HOH HOH . 
H 3 HOH B 29 409 409 HOH HOH . 
H 3 HOH B 30 411 411 HOH HOH . 
H 3 HOH B 31 413 413 HOH HOH . 
H 3 HOH B 32 415 415 HOH HOH . 
H 3 HOH B 33 417 417 HOH HOH . 
H 3 HOH B 34 422 422 HOH HOH . 
H 3 HOH B 35 424 424 HOH HOH . 
H 3 HOH B 36 426 426 HOH HOH . 
H 3 HOH B 37 429 429 HOH HOH . 
H 3 HOH B 38 432 432 HOH HOH . 
H 3 HOH B 39 437 437 HOH HOH . 
H 3 HOH B 40 439 439 HOH HOH . 
H 3 HOH B 41 443 443 HOH HOH . 
H 3 HOH B 42 448 448 HOH HOH . 
H 3 HOH B 43 455 455 HOH HOH . 
H 3 HOH B 44 459 459 HOH HOH . 
H 3 HOH B 45 460 460 HOH HOH . 
H 3 HOH B 46 461 461 HOH HOH . 
H 3 HOH B 47 467 467 HOH HOH . 
H 3 HOH B 48 468 468 HOH HOH . 
H 3 HOH B 49 471 471 HOH HOH . 
H 3 HOH B 50 480 480 HOH HOH . 
H 3 HOH B 51 483 483 HOH HOH . 
H 3 HOH B 52 485 485 HOH HOH . 
H 3 HOH B 53 487 487 HOH HOH . 
H 3 HOH B 54 498 498 HOH HOH . 
H 3 HOH B 55 500 500 HOH HOH . 
H 3 HOH B 56 501 501 HOH HOH . 
H 3 HOH B 57 502 502 HOH HOH . 
H 3 HOH B 58 504 504 HOH HOH . 
H 3 HOH B 59 510 510 HOH HOH . 
H 3 HOH B 60 515 515 HOH HOH . 
H 3 HOH B 61 517 517 HOH HOH . 
H 3 HOH B 62 520 520 HOH HOH . 
H 3 HOH B 63 523 523 HOH HOH . 
H 3 HOH B 64 527 527 HOH HOH . 
H 3 HOH B 65 533 533 HOH HOH . 
H 3 HOH B 66 536 536 HOH HOH . 
H 3 HOH B 67 542 542 HOH HOH . 
H 3 HOH B 68 546 546 HOH HOH . 
H 3 HOH B 69 551 551 HOH HOH . 
H 3 HOH B 70 553 553 HOH HOH . 
H 3 HOH B 71 557 557 HOH HOH . 
H 3 HOH B 72 558 558 HOH HOH . 
I 3 HOH C 1 301 301 HOH HOH . 
I 3 HOH C 2 302 302 HOH HOH . 
I 3 HOH C 3 305 305 HOH HOH . 
I 3 HOH C 4 306 306 HOH HOH . 
I 3 HOH C 5 313 313 HOH HOH . 
I 3 HOH C 6 317 317 HOH HOH . 
I 3 HOH C 7 320 320 HOH HOH . 
I 3 HOH C 8 325 325 HOH HOH . 
I 3 HOH C 9 327 327 HOH HOH . 
I 3 HOH C 10 332 332 HOH HOH . 
I 3 HOH C 11 335 335 HOH HOH . 
I 3 HOH C 12 339 339 HOH HOH . 
I 3 HOH C 13 341 341 HOH HOH . 
I 3 HOH C 14 342 342 HOH HOH . 
I 3 HOH C 15 344 344 HOH HOH . 
I 3 HOH C 16 347 347 HOH HOH . 
I 3 HOH C 17 348 348 HOH HOH . 
I 3 HOH C 18 350 350 HOH HOH . 
I 3 HOH C 19 352 352 HOH HOH . 
I 3 HOH C 20 353 353 HOH HOH . 
I 3 HOH C 21 355 355 HOH HOH . 
I 3 HOH C 22 359 359 HOH HOH . 
I 3 HOH C 23 363 363 HOH HOH . 
I 3 HOH C 24 367 367 HOH HOH . 
I 3 HOH C 25 368 368 HOH HOH . 
I 3 HOH C 26 375 375 HOH HOH . 
I 3 HOH C 27 376 376 HOH HOH . 
I 3 HOH C 28 378 378 HOH HOH . 
I 3 HOH C 29 380 380 HOH HOH . 
I 3 HOH C 30 381 381 HOH HOH . 
I 3 HOH C 31 384 384 HOH HOH . 
I 3 HOH C 32 386 386 HOH HOH . 
I 3 HOH C 33 388 388 HOH HOH . 
I 3 HOH C 34 390 390 HOH HOH . 
I 3 HOH C 35 400 400 HOH HOH . 
I 3 HOH C 36 402 402 HOH HOH . 
I 3 HOH C 37 407 407 HOH HOH . 
I 3 HOH C 38 416 416 HOH HOH . 
I 3 HOH C 39 418 418 HOH HOH . 
I 3 HOH C 40 423 423 HOH HOH . 
I 3 HOH C 41 427 427 HOH HOH . 
I 3 HOH C 42 430 430 HOH HOH . 
I 3 HOH C 43 433 433 HOH HOH . 
I 3 HOH C 44 434 434 HOH HOH . 
I 3 HOH C 45 435 435 HOH HOH . 
I 3 HOH C 46 438 438 HOH HOH . 
I 3 HOH C 47 440 440 HOH HOH . 
I 3 HOH C 48 447 447 HOH HOH . 
I 3 HOH C 49 449 449 HOH HOH . 
I 3 HOH C 50 450 450 HOH HOH . 
I 3 HOH C 51 451 451 HOH HOH . 
I 3 HOH C 52 453 453 HOH HOH . 
I 3 HOH C 53 454 454 HOH HOH . 
I 3 HOH C 54 457 457 HOH HOH . 
I 3 HOH C 55 458 458 HOH HOH . 
I 3 HOH C 56 462 462 HOH HOH . 
I 3 HOH C 57 464 464 HOH HOH . 
I 3 HOH C 58 469 469 HOH HOH . 
I 3 HOH C 59 477 477 HOH HOH . 
I 3 HOH C 60 478 478 HOH HOH . 
I 3 HOH C 61 482 482 HOH HOH . 
I 3 HOH C 62 492 492 HOH HOH . 
I 3 HOH C 63 496 496 HOH HOH . 
I 3 HOH C 64 497 497 HOH HOH . 
I 3 HOH C 65 499 499 HOH HOH . 
I 3 HOH C 66 505 505 HOH HOH . 
I 3 HOH C 67 506 506 HOH HOH . 
I 3 HOH C 68 508 508 HOH HOH . 
I 3 HOH C 69 511 511 HOH HOH . 
I 3 HOH C 70 512 512 HOH HOH . 
I 3 HOH C 71 516 516 HOH HOH . 
I 3 HOH C 72 518 518 HOH HOH . 
I 3 HOH C 73 521 521 HOH HOH . 
I 3 HOH C 74 525 525 HOH HOH . 
I 3 HOH C 75 526 526 HOH HOH . 
I 3 HOH C 76 532 532 HOH HOH . 
I 3 HOH C 77 538 538 HOH HOH . 
I 3 HOH C 78 539 539 HOH HOH . 
I 3 HOH C 79 540 540 HOH HOH . 
I 3 HOH C 80 543 543 HOH HOH . 
I 3 HOH C 81 544 544 HOH HOH . 
I 3 HOH C 82 548 548 HOH HOH . 
I 3 HOH C 83 549 549 HOH HOH . 
I 3 HOH C 84 552 552 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . F 2 80.685 120.953 20.834 1 30.45 ? S SO4 3250 C 1 
HETATM 2 O O1 SO4 . . . F 2 81.784 120.761 19.86 1 28.39 ? O1 SO4 3250 C 1 
HETATM 3 O O2 SO4 . . . F 2 79.746 121.973 20.337 1 28.8 ? O2 SO4 3250 C 1 
HETATM 4 O O3 SO4 . . . F 2 79.968 119.676 21.036 1 30.72 ? O3 SO4 3250 C 1 
HETATM 5 O O4 SO4 . . . F 2 81.274 121.404 22.119 1 29.27 ? O4 SO4 3250 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           313 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#