data_1JRI # _model_server_result.job_id vCgAP_tPYC3MXFnVtOghCg _model_server_result.datetime_utc '2024-11-22 20:50:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jri # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":101}' # _entry.id 1JRI # _exptl.entry_id 1JRI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JRI _cell.length_a 40.371 _cell.length_b 114.698 _cell.length_c 238.6 _cell.Z_PDB 56 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JRI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA heptameric 7 author_and_software_defined_assembly 1 PISA heptameric 7 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,O,P,Q,R,S,T,U,EA,FA,GA,HA,IA,JA,KA 1 1 H,I,J,K,L,M,N,V,W,X,Y,Z,AA,BA,CA,DA,LA,MA,NA,OA,PA,QA,RA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 P N N ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N ? 3 Z N N ? 3 AA N N ? 3 BA N N ? 3 CA N N ? 3 DA N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 1JRI _atom_sites.fract_transf_matrix[1][1] 0.02477 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008719 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004191 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code O 2 CL B 1 202 2 CL CL . P 3 EDO C 1 101 1 EDO EDO . Q 3 EDO D 1 107 7 EDO EDO . R 3 EDO E 1 103 3 EDO EDO . S 3 EDO F 1 109 9 EDO EDO . T 2 CL G 1 203 3 CL CL . U 3 EDO G 1 104 4 EDO EDO . V 3 EDO H 1 111 11 EDO EDO . W 3 EDO H 1 112 12 EDO EDO . X 3 EDO I 1 113 13 EDO EDO . Y 2 CL L 1 201 1 CL CL . Z 3 EDO L 1 102 2 EDO EDO . AA 3 EDO M 1 108 8 EDO EDO . BA 3 EDO N 1 105 5 EDO EDO . CA 3 EDO N 1 106 6 EDO EDO . DA 3 EDO N 1 110 10 EDO EDO . EA 4 HOH A 1 86 67 HOH WAT . EA 4 HOH A 2 87 76 HOH WAT . EA 4 HOH A 3 88 86 HOH WAT . FA 4 HOH B 1 203 5 HOH WAT . FA 4 HOH B 2 204 36 HOH WAT . FA 4 HOH B 3 205 48 HOH WAT . FA 4 HOH B 4 206 49 HOH WAT . FA 4 HOH B 5 207 59 HOH WAT . FA 4 HOH B 6 208 74 HOH WAT . GA 4 HOH C 1 102 12 HOH WAT . GA 4 HOH C 2 103 19 HOH WAT . GA 4 HOH C 3 104 30 HOH WAT . GA 4 HOH C 4 105 39 HOH WAT . GA 4 HOH C 5 106 41 HOH WAT . GA 4 HOH C 6 107 55 HOH WAT . GA 4 HOH C 7 108 73 HOH WAT . GA 4 HOH C 8 109 75 HOH WAT . GA 4 HOH C 9 110 85 HOH WAT . HA 4 HOH D 1 108 11 HOH WAT . HA 4 HOH D 2 109 27 HOH WAT . HA 4 HOH D 3 110 37 HOH WAT . HA 4 HOH D 4 111 40 HOH WAT . HA 4 HOH D 5 112 70 HOH WAT . HA 4 HOH D 6 113 71 HOH WAT . IA 4 HOH E 1 104 7 HOH WAT . IA 4 HOH E 2 105 8 HOH WAT . IA 4 HOH E 3 106 14 HOH WAT . IA 4 HOH E 4 107 15 HOH WAT . IA 4 HOH E 5 108 51 HOH WAT . IA 4 HOH E 6 109 52 HOH WAT . IA 4 HOH E 7 110 69 HOH WAT . IA 4 HOH E 8 111 82 HOH WAT . IA 4 HOH E 9 112 84 HOH WAT . JA 4 HOH F 1 110 3 HOH WAT . JA 4 HOH F 2 111 22 HOH WAT . JA 4 HOH F 3 112 31 HOH WAT . JA 4 HOH F 4 113 34 HOH WAT . JA 4 HOH F 5 114 62 HOH WAT . JA 4 HOH F 6 115 65 HOH WAT . JA 4 HOH F 7 116 77 HOH WAT . KA 4 HOH G 1 204 16 HOH WAT . KA 4 HOH G 2 205 43 HOH WAT . KA 4 HOH G 3 206 56 HOH WAT . KA 4 HOH G 4 207 66 HOH WAT . LA 4 HOH H 1 113 25 HOH WAT . LA 4 HOH H 2 114 35 HOH WAT . LA 4 HOH H 3 115 60 HOH WAT . MA 4 HOH I 1 114 47 HOH WAT . MA 4 HOH I 2 115 57 HOH WAT . MA 4 HOH I 3 116 83 HOH WAT . NA 4 HOH J 1 86 20 HOH WAT . NA 4 HOH J 2 87 32 HOH WAT . OA 4 HOH K 1 86 4 HOH WAT . OA 4 HOH K 2 87 10 HOH WAT . PA 4 HOH L 1 202 18 HOH WAT . PA 4 HOH L 2 203 21 HOH WAT . PA 4 HOH L 3 204 23 HOH WAT . PA 4 HOH L 4 205 24 HOH WAT . PA 4 HOH L 5 206 28 HOH WAT . PA 4 HOH L 6 207 38 HOH WAT . PA 4 HOH L 7 208 42 HOH WAT . PA 4 HOH L 8 209 46 HOH WAT . PA 4 HOH L 9 210 53 HOH WAT . PA 4 HOH L 10 211 63 HOH WAT . PA 4 HOH L 11 212 68 HOH WAT . PA 4 HOH L 12 213 78 HOH WAT . PA 4 HOH L 13 214 81 HOH WAT . QA 4 HOH M 1 109 2 HOH WAT . QA 4 HOH M 2 110 6 HOH WAT . QA 4 HOH M 3 111 9 HOH WAT . QA 4 HOH M 4 112 13 HOH WAT . QA 4 HOH M 5 113 33 HOH WAT . QA 4 HOH M 6 114 45 HOH WAT . QA 4 HOH M 7 115 54 HOH WAT . QA 4 HOH M 8 116 61 HOH WAT . QA 4 HOH M 9 117 64 HOH WAT . QA 4 HOH M 10 118 79 HOH WAT . RA 4 HOH N 1 111 1 HOH WAT . RA 4 HOH N 2 112 17 HOH WAT . RA 4 HOH N 3 113 26 HOH WAT . RA 4 HOH N 4 114 29 HOH WAT . RA 4 HOH N 5 115 44 HOH WAT . RA 4 HOH N 6 116 50 HOH WAT . RA 4 HOH N 7 117 58 HOH WAT . RA 4 HOH N 8 118 72 HOH WAT . RA 4 HOH N 9 119 80 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . P 3 50.112 30.862 85.542 1 49.09 ? C1 EDO 101 C 1 HETATM 2 O O1 EDO . . . P 3 49.104 30.063 85.166 1 65.47 ? O1 EDO 101 C 1 HETATM 3 C C2 EDO . . . P 3 49.572 32.223 85.977 1 56.16 ? C2 EDO 101 C 1 HETATM 4 O O2 EDO . . . P 3 49.288 32.114 87.487 1 61.4 ? O2 EDO 101 C 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #