data_1JSZ # _model_server_result.job_id v33gp7tRvrACe2ssrfpIjw _model_server_result.datetime_utc '2024-11-20 07:38:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jsz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 1JSZ # _exptl.entry_id 1JSZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 184.219 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 7,9-DIMETHYLGUANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 118.1 _cell.angle_gamma 90 _cell.entry_id 1JSZ _cell.length_a 84.3 _cell.length_b 67.7 _cell.length_c 79.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JSZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H14 N5 O 1' _chem_comp.formula_weight 184.219 _chem_comp.id NDM _chem_comp.mon_nstd_flag . _chem_comp.name 7,9-DIMETHYLGUANINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CN9 N9 NDM sing 237 n n CN9 HN91 NDM sing 238 n n CN9 HN92 NDM sing 239 n n CN9 HN93 NDM sing 240 n n N9 C4 NDM sing 241 n y N9 C8 NDM sing 242 n y C4 N3 NDM sing 243 n n C4 C5 NDM doub 244 n y N3 C2 NDM sing 245 n n C2 N2 NDM sing 246 n n C2 N1 NDM sing 247 n n C2 H22 NDM sing 248 n n N2 HN21 NDM sing 249 n n N2 HN22 NDM sing 250 n n N1 C6 NDM sing 251 n n N1 HN11 NDM sing 252 n n C6 O6 NDM sing 253 n n C6 C5 NDM sing 254 n n C6 H66 NDM sing 255 n n C5 N7 NDM sing 256 n y N7 CN7 NDM sing 257 n n N7 C8 NDM doub 258 n y CN7 HN71 NDM sing 259 n n CN7 HN72 NDM sing 260 n n CN7 HN73 NDM sing 261 n n C8 HC81 NDM sing 262 n n HN1 N3 NDM sing 263 n n HO1 O6 NDM sing 264 n n # _atom_sites.entry_id 1JSZ _atom_sites.fract_transf_matrix[1][1] 0.011862 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006334 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014771 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014242 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SAH A 1 400 400 SAH SAH . C 3 NDM A 1 600 600 NDM DMG . D 4 HOH A 1 601 601 HOH HOH . D 4 HOH A 2 602 602 HOH HOH . D 4 HOH A 3 603 603 HOH HOH . D 4 HOH A 4 604 604 HOH HOH . D 4 HOH A 5 605 605 HOH HOH . D 4 HOH A 6 606 606 HOH HOH . D 4 HOH A 7 607 607 HOH HOH . D 4 HOH A 8 608 608 HOH HOH . D 4 HOH A 9 609 609 HOH HOH . D 4 HOH A 10 610 610 HOH HOH . D 4 HOH A 11 611 611 HOH HOH . D 4 HOH A 12 612 612 HOH HOH . D 4 HOH A 13 613 613 HOH HOH . D 4 HOH A 14 614 614 HOH HOH . D 4 HOH A 15 615 615 HOH HOH . D 4 HOH A 16 616 616 HOH HOH . D 4 HOH A 17 617 617 HOH HOH . D 4 HOH A 18 618 618 HOH HOH . D 4 HOH A 19 619 619 HOH HOH . D 4 HOH A 20 620 620 HOH HOH . D 4 HOH A 21 621 621 HOH HOH . D 4 HOH A 22 622 622 HOH HOH . D 4 HOH A 23 623 623 HOH HOH . D 4 HOH A 24 624 624 HOH HOH . D 4 HOH A 25 625 625 HOH HOH . D 4 HOH A 26 626 626 HOH HOH . D 4 HOH A 27 627 627 HOH HOH . D 4 HOH A 28 628 628 HOH HOH . D 4 HOH A 29 629 629 HOH HOH . D 4 HOH A 30 630 630 HOH HOH . D 4 HOH A 31 631 631 HOH HOH . D 4 HOH A 32 632 632 HOH HOH . D 4 HOH A 33 633 633 HOH HOH . D 4 HOH A 34 634 634 HOH HOH . D 4 HOH A 35 635 635 HOH HOH . D 4 HOH A 36 636 636 HOH HOH . D 4 HOH A 37 637 637 HOH HOH . D 4 HOH A 38 638 638 HOH HOH . D 4 HOH A 39 639 639 HOH HOH . D 4 HOH A 40 640 640 HOH HOH . D 4 HOH A 41 641 641 HOH HOH . D 4 HOH A 42 642 642 HOH HOH . D 4 HOH A 43 643 643 HOH HOH . D 4 HOH A 44 644 644 HOH HOH . D 4 HOH A 45 645 645 HOH HOH . D 4 HOH A 46 646 646 HOH HOH . D 4 HOH A 47 647 647 HOH HOH . D 4 HOH A 48 648 648 HOH HOH . D 4 HOH A 49 649 649 HOH HOH . D 4 HOH A 50 650 650 HOH HOH . D 4 HOH A 51 651 651 HOH HOH . D 4 HOH A 52 652 652 HOH HOH . D 4 HOH A 53 653 653 HOH HOH . D 4 HOH A 54 654 654 HOH HOH . D 4 HOH A 55 655 655 HOH HOH . D 4 HOH A 56 656 656 HOH HOH . D 4 HOH A 57 657 657 HOH HOH . D 4 HOH A 58 658 658 HOH HOH . D 4 HOH A 59 659 659 HOH HOH . D 4 HOH A 60 660 660 HOH HOH . D 4 HOH A 61 661 661 HOH HOH . D 4 HOH A 62 662 662 HOH HOH . D 4 HOH A 63 663 663 HOH HOH . D 4 HOH A 64 664 664 HOH HOH . D 4 HOH A 65 665 665 HOH HOH . D 4 HOH A 66 666 666 HOH HOH . D 4 HOH A 67 667 667 HOH HOH . D 4 HOH A 68 668 668 HOH HOH . D 4 HOH A 69 669 669 HOH HOH . D 4 HOH A 70 670 670 HOH HOH . D 4 HOH A 71 671 671 HOH HOH . D 4 HOH A 72 672 672 HOH HOH . D 4 HOH A 73 673 673 HOH HOH . D 4 HOH A 74 674 674 HOH HOH . D 4 HOH A 75 675 675 HOH HOH . D 4 HOH A 76 676 676 HOH HOH . D 4 HOH A 77 677 677 HOH HOH . D 4 HOH A 78 678 678 HOH HOH . D 4 HOH A 79 679 679 HOH HOH . D 4 HOH A 80 680 680 HOH HOH . D 4 HOH A 81 681 681 HOH HOH . D 4 HOH A 82 682 682 HOH HOH . D 4 HOH A 83 683 683 HOH HOH . D 4 HOH A 84 684 684 HOH HOH . D 4 HOH A 85 685 685 HOH HOH . D 4 HOH A 86 686 686 HOH HOH . D 4 HOH A 87 687 687 HOH HOH . D 4 HOH A 88 688 688 HOH HOH . D 4 HOH A 89 689 689 HOH HOH . D 4 HOH A 90 690 690 HOH HOH . D 4 HOH A 91 691 691 HOH HOH . D 4 HOH A 92 692 692 HOH HOH . D 4 HOH A 93 693 693 HOH HOH . D 4 HOH A 94 694 694 HOH HOH . D 4 HOH A 95 695 695 HOH HOH . D 4 HOH A 96 696 696 HOH HOH . D 4 HOH A 97 697 697 HOH HOH . D 4 HOH A 98 698 698 HOH HOH . D 4 HOH A 99 699 699 HOH HOH . D 4 HOH A 100 700 700 HOH HOH . D 4 HOH A 101 701 701 HOH HOH . D 4 HOH A 102 702 702 HOH HOH . D 4 HOH A 103 703 703 HOH HOH . D 4 HOH A 104 704 704 HOH HOH . D 4 HOH A 105 705 705 HOH HOH . D 4 HOH A 106 706 706 HOH HOH . D 4 HOH A 107 707 707 HOH HOH . D 4 HOH A 108 708 708 HOH HOH . D 4 HOH A 109 709 709 HOH HOH . D 4 HOH A 110 710 710 HOH HOH . D 4 HOH A 111 711 711 HOH HOH . D 4 HOH A 112 712 712 HOH HOH . D 4 HOH A 113 713 713 HOH HOH . D 4 HOH A 114 714 714 HOH HOH . D 4 HOH A 115 715 715 HOH HOH . D 4 HOH A 116 716 716 HOH HOH . D 4 HOH A 117 717 717 HOH HOH . D 4 HOH A 118 718 718 HOH HOH . D 4 HOH A 119 719 719 HOH HOH . D 4 HOH A 120 720 720 HOH HOH . D 4 HOH A 121 721 721 HOH HOH . D 4 HOH A 122 722 722 HOH HOH . D 4 HOH A 123 723 723 HOH HOH . D 4 HOH A 124 724 724 HOH HOH . D 4 HOH A 125 725 725 HOH HOH . D 4 HOH A 126 726 726 HOH HOH . D 4 HOH A 127 727 727 HOH HOH . D 4 HOH A 128 728 728 HOH HOH . D 4 HOH A 129 729 729 HOH HOH . D 4 HOH A 130 730 730 HOH HOH . D 4 HOH A 131 731 731 HOH HOH . D 4 HOH A 132 732 732 HOH HOH . D 4 HOH A 133 733 733 HOH HOH . D 4 HOH A 134 734 734 HOH HOH . D 4 HOH A 135 735 735 HOH HOH . D 4 HOH A 136 736 736 HOH HOH . D 4 HOH A 137 737 737 HOH HOH . D 4 HOH A 138 738 738 HOH HOH . D 4 HOH A 139 739 739 HOH HOH . D 4 HOH A 140 740 740 HOH HOH . D 4 HOH A 141 741 741 HOH HOH . D 4 HOH A 142 742 742 HOH HOH . D 4 HOH A 143 743 743 HOH HOH . D 4 HOH A 144 744 744 HOH HOH . D 4 HOH A 145 745 745 HOH HOH . D 4 HOH A 146 746 746 HOH HOH . D 4 HOH A 147 747 747 HOH HOH . D 4 HOH A 148 748 748 HOH HOH . D 4 HOH A 149 749 749 HOH HOH . D 4 HOH A 150 750 750 HOH HOH . D 4 HOH A 151 751 751 HOH HOH . D 4 HOH A 152 752 752 HOH HOH . D 4 HOH A 153 753 753 HOH HOH . D 4 HOH A 154 754 754 HOH HOH . D 4 HOH A 155 755 755 HOH HOH . D 4 HOH A 156 756 756 HOH HOH . D 4 HOH A 157 757 757 HOH HOH . D 4 HOH A 158 758 758 HOH HOH . D 4 HOH A 159 759 759 HOH HOH . D 4 HOH A 160 760 760 HOH HOH . D 4 HOH A 161 761 761 HOH HOH . D 4 HOH A 162 762 762 HOH HOH . D 4 HOH A 163 763 763 HOH HOH . D 4 HOH A 164 764 764 HOH HOH . D 4 HOH A 165 765 765 HOH HOH . D 4 HOH A 166 1675 675 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CN9 NDM . . . C 3 17.373 10.211 22.103 1 41.38 ? CN9 NDM 600 A 1 HETATM 2 N N9 NDM . . . C 3 17.031 11.656 21.968 1 38 ? N9 NDM 600 A 1 HETATM 3 C C4 NDM . . . C 3 17.559 12.456 20.986 1 39.19 ? C4 NDM 600 A 1 HETATM 4 N N3 NDM . . . C 3 18.392 11.921 20.01 1 39.53 ? N3 NDM 600 A 1 HETATM 5 C C2 NDM . . . C 3 18.786 12.905 19.175 1 40.37 ? C2 NDM 600 A 1 HETATM 6 N N2 NDM . . . C 3 19.588 12.578 18.14 1 40.98 ? N2 NDM 600 A 1 HETATM 7 N N1 NDM . . . C 3 18.379 14.253 19.306 1 40.38 ? N1 NDM 600 A 1 HETATM 8 C C6 NDM . . . C 3 17.48 14.765 20.331 1 37.45 ? C6 NDM 600 A 1 HETATM 9 O O6 NDM . . . C 3 16.893 16.092 20.308 1 36.02 ? O6 NDM 600 A 1 HETATM 10 C C5 NDM . . . C 3 17.094 13.751 21.199 1 38.79 ? C5 NDM 600 A 1 HETATM 11 N N7 NDM . . . C 3 16.251 13.835 22.305 1 38.57 ? N7 NDM 600 A 1 HETATM 12 C CN7 NDM . . . C 3 15.345 14.891 22.674 1 38.43 ? CN7 NDM 600 A 1 HETATM 13 C C8 NDM . . . C 3 16.241 12.447 22.753 1 37.51 ? C8 NDM 600 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 286 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #