data_1JT6 # _model_server_result.job_id ssHYLjYZSKiJRysQFbEDaA _model_server_result.datetime_utc '2024-11-23 19:22:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jt6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"BA","auth_seq_id":201}' # _entry.id 1JT6 # _exptl.entry_id 1JT6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.665 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DEQUALINIUM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JT6 _cell.length_a 172 _cell.length_b 172 _cell.length_c 94.6 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JT6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,S,T,U,V,W,X,Y,Z,AA,BA,HA,JA 1 1 B,D,K,L,M,N,O,P,Q,R,CA,DA,EA,FA,GA,IA,KA 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id BA _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H40 N4 2' _chem_comp.formula_weight 456.665 _chem_comp.id DEQ _chem_comp.mon_nstd_flag . _chem_comp.name DEQUALINIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms DEQUADIN # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 DEQ doub 83 n y C1 C5 DEQ sing 84 n y C1 H11 DEQ sing 85 n n C2 C3 DEQ sing 86 n y C2 H21 DEQ sing 87 n n C3 C4 DEQ doub 88 n y C3 H31 DEQ sing 89 n n C4 C6 DEQ sing 90 n y C4 H41 DEQ sing 91 n n C5 C6 DEQ doub 92 n y C5 N1 DEQ sing 93 n y C6 C7 DEQ sing 94 n y C7 C8 DEQ doub 95 n y C7 N4 DEQ sing 96 n n C8 C9 DEQ sing 97 n y C8 H81 DEQ sing 98 n n C9 N1 DEQ doub 99 n y C9 C30 DEQ sing 100 n n N1 C28 DEQ sing 101 n n C10 C11 DEQ doub 102 n y C10 C14 DEQ sing 103 n y C10 C15 DEQ sing 104 n y C11 N2 DEQ sing 105 n y C11 C18 DEQ sing 106 n y N2 C12 DEQ doub 107 n y N2 C19 DEQ sing 108 n n C12 C13 DEQ sing 109 n y C12 C29 DEQ sing 110 n n C13 C14 DEQ doub 111 n y C13 H131 DEQ sing 112 n n C14 N3 DEQ sing 113 n n C15 C16 DEQ doub 114 n y C15 H151 DEQ sing 115 n n C16 C17 DEQ sing 116 n y C16 H161 DEQ sing 117 n n C17 C18 DEQ doub 118 n y C17 H171 DEQ sing 119 n n C18 H181 DEQ sing 120 n n C19 C20 DEQ sing 121 n n C19 H191 DEQ sing 122 n n C19 H192 DEQ sing 123 n n C20 C21 DEQ sing 124 n n C20 H201 DEQ sing 125 n n C20 H202 DEQ sing 126 n n C21 C22 DEQ sing 127 n n C21 H211 DEQ sing 128 n n C21 H212 DEQ sing 129 n n C22 C23 DEQ sing 130 n n C22 H221 DEQ sing 131 n n C22 H222 DEQ sing 132 n n C23 C24 DEQ sing 133 n n C23 H231 DEQ sing 134 n n C23 H232 DEQ sing 135 n n C24 C25 DEQ sing 136 n n C24 H241 DEQ sing 137 n n C24 H242 DEQ sing 138 n n C25 C26 DEQ sing 139 n n C25 H251 DEQ sing 140 n n C25 H252 DEQ sing 141 n n C26 C27 DEQ sing 142 n n C26 H261 DEQ sing 143 n n C26 H262 DEQ sing 144 n n C27 C28 DEQ sing 145 n n C27 H271 DEQ sing 146 n n C27 H272 DEQ sing 147 n n C28 H281 DEQ sing 148 n n C28 H282 DEQ sing 149 n n C30 H301 DEQ sing 150 n n C30 H302 DEQ sing 151 n n C30 H303 DEQ sing 152 n n C29 H291 DEQ sing 153 n n C29 H292 DEQ sing 154 n n C29 H293 DEQ sing 155 n n N4 HN41 DEQ sing 156 n n N4 HN42 DEQ sing 157 n n N3 HN31 DEQ sing 158 n n N3 HN32 DEQ sing 159 n n # _atom_sites.entry_id 1JT6 _atom_sites.fract_transf_matrix[1][1] 0.005814 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005814 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010571 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 B 1 600 599 SO4 SO4 . F 2 SO4 B 1 219 19 SO4 SO4 . G 2 SO4 B 1 199 199 SO4 SO4 . H 2 SO4 B 1 499 499 SO4 SO4 . I 2 SO4 B 1 700 699 SO4 SO4 . J 2 SO4 B 1 1000 999 SO4 SO4 . K 2 SO4 D 1 899 899 SO4 SO4 . L 2 SO4 D 1 269 69 SO4 SO4 . M 2 SO4 D 1 270 69 SO4 SO4 . N 2 SO4 D 1 999 999 SO4 SO4 . O 2 SO4 D 1 280 79 SO4 SO4 . P 2 SO4 D 1 779 779 SO4 SO4 . Q 2 SO4 D 1 639 639 SO4 SO4 . R 2 SO4 D 1 400 399 SO4 SO4 . S 2 SO4 A 1 599 599 SO4 SO4 . T 2 SO4 A 1 299 299 SO4 SO4 . U 2 SO4 A 1 699 699 SO4 SO4 . V 2 SO4 A 1 799 799 SO4 SO4 . W 2 SO4 A 1 800 799 SO4 SO4 . X 2 SO4 A 1 801 799 SO4 SO4 . Y 2 SO4 A 1 279 79 SO4 SO4 . Z 2 SO4 A 1 601 599 SO4 SO4 . AA 2 SO4 A 1 579 579 SO4 SO4 . BA 3 DEQ A 1 201 1 DEQ UNK . CA 2 SO4 E 1 900 899 SO4 SO4 . DA 2 SO4 E 1 249 49 SO4 SO4 . EA 2 SO4 E 1 399 399 SO4 SO4 . FA 2 SO4 E 1 289 89 SO4 SO4 . GA 2 SO4 E 1 239 39 SO4 SO4 . HA 4 HOH B 1 1001 18 HOH WAT . HA 4 HOH B 2 1002 19 HOH WAT . HA 4 HOH B 3 1003 20 HOH WAT . HA 4 HOH B 4 1004 34 HOH WAT . HA 4 HOH B 5 1005 35 HOH WAT . HA 4 HOH B 6 1006 36 HOH WAT . HA 4 HOH B 7 1007 38 HOH WAT . HA 4 HOH B 8 1008 41 HOH WAT . HA 4 HOH B 9 1009 46 HOH WAT . HA 4 HOH B 10 1010 49 HOH WAT . HA 4 HOH B 11 1011 64 HOH WAT . HA 4 HOH B 12 1012 72 HOH WAT . HA 4 HOH B 13 1013 76 HOH WAT . HA 4 HOH B 14 1014 77 HOH WAT . HA 4 HOH B 15 1015 79 HOH WAT . HA 4 HOH B 16 1016 117 HOH WAT . HA 4 HOH B 17 1017 120 HOH WAT . HA 4 HOH B 18 1018 128 HOH WAT . HA 4 HOH B 19 1019 129 HOH WAT . HA 4 HOH B 20 1020 131 HOH WAT . IA 4 HOH D 1 1000 15 HOH WAT . IA 4 HOH D 2 1001 42 HOH WAT . IA 4 HOH D 3 1002 43 HOH WAT . IA 4 HOH D 4 1003 44 HOH WAT . IA 4 HOH D 5 1004 59 HOH WAT . IA 4 HOH D 6 1005 60 HOH WAT . IA 4 HOH D 7 1006 70 HOH WAT . IA 4 HOH D 8 1007 78 HOH WAT . IA 4 HOH D 9 1008 88 HOH WAT . IA 4 HOH D 10 1009 93 HOH WAT . IA 4 HOH D 11 1010 94 HOH WAT . IA 4 HOH D 12 1011 100 HOH WAT . IA 4 HOH D 13 1012 127 HOH WAT . IA 4 HOH D 14 1013 130 HOH WAT . IA 4 HOH D 15 1014 134 HOH WAT . IA 4 HOH D 16 1015 136 HOH WAT . IA 4 HOH D 17 1016 138 HOH WAT . IA 4 HOH D 18 1017 142 HOH WAT . IA 4 HOH D 19 1018 143 HOH WAT . IA 4 HOH D 20 1019 145 HOH WAT . IA 4 HOH D 21 1020 146 HOH WAT . JA 4 HOH A 1 802 5 HOH WAT . JA 4 HOH A 2 803 10 HOH WAT . JA 4 HOH A 3 804 11 HOH WAT . JA 4 HOH A 4 805 14 HOH WAT . JA 4 HOH A 5 806 16 HOH WAT . JA 4 HOH A 6 807 21 HOH WAT . JA 4 HOH A 7 808 22 HOH WAT . JA 4 HOH A 8 809 23 HOH WAT . JA 4 HOH A 9 810 24 HOH WAT . JA 4 HOH A 10 811 25 HOH WAT . JA 4 HOH A 11 812 26 HOH WAT . JA 4 HOH A 12 813 27 HOH WAT . JA 4 HOH A 13 814 28 HOH WAT . JA 4 HOH A 14 815 29 HOH WAT . JA 4 HOH A 15 816 30 HOH WAT . JA 4 HOH A 16 817 37 HOH WAT . JA 4 HOH A 17 818 39 HOH WAT . JA 4 HOH A 18 819 40 HOH WAT . JA 4 HOH A 19 820 45 HOH WAT . JA 4 HOH A 20 821 51 HOH WAT . JA 4 HOH A 21 822 53 HOH WAT . JA 4 HOH A 22 823 54 HOH WAT . JA 4 HOH A 23 824 55 HOH WAT . JA 4 HOH A 24 825 56 HOH WAT . JA 4 HOH A 25 826 57 HOH WAT . JA 4 HOH A 26 827 58 HOH WAT . JA 4 HOH A 27 828 65 HOH WAT . JA 4 HOH A 28 829 66 HOH WAT . JA 4 HOH A 29 830 68 HOH WAT . JA 4 HOH A 30 831 69 HOH WAT . JA 4 HOH A 31 832 75 HOH WAT . JA 4 HOH A 32 833 82 HOH WAT . JA 4 HOH A 33 834 84 HOH WAT . JA 4 HOH A 34 835 87 HOH WAT . JA 4 HOH A 35 836 90 HOH WAT . JA 4 HOH A 36 837 91 HOH WAT . JA 4 HOH A 37 838 92 HOH WAT . JA 4 HOH A 38 839 97 HOH WAT . JA 4 HOH A 39 840 98 HOH WAT . JA 4 HOH A 40 841 99 HOH WAT . JA 4 HOH A 41 842 102 HOH WAT . JA 4 HOH A 42 843 103 HOH WAT . JA 4 HOH A 43 844 104 HOH WAT . JA 4 HOH A 44 845 105 HOH WAT . JA 4 HOH A 45 846 106 HOH WAT . JA 4 HOH A 46 847 107 HOH WAT . JA 4 HOH A 47 848 110 HOH WAT . JA 4 HOH A 48 849 111 HOH WAT . JA 4 HOH A 49 850 112 HOH WAT . JA 4 HOH A 50 851 114 HOH WAT . JA 4 HOH A 51 852 115 HOH WAT . JA 4 HOH A 52 853 116 HOH WAT . JA 4 HOH A 53 854 119 HOH WAT . JA 4 HOH A 54 855 121 HOH WAT . JA 4 HOH A 55 856 122 HOH WAT . JA 4 HOH A 56 857 123 HOH WAT . JA 4 HOH A 57 858 124 HOH WAT . JA 4 HOH A 58 859 148 HOH WAT . JA 4 HOH A 59 860 149 HOH WAT . KA 4 HOH E 1 901 1 HOH WAT . KA 4 HOH E 2 902 2 HOH WAT . KA 4 HOH E 3 903 3 HOH WAT . KA 4 HOH E 4 904 4 HOH WAT . KA 4 HOH E 5 905 6 HOH WAT . KA 4 HOH E 6 906 9 HOH WAT . KA 4 HOH E 7 907 13 HOH WAT . KA 4 HOH E 8 908 17 HOH WAT . KA 4 HOH E 9 909 31 HOH WAT . KA 4 HOH E 10 910 32 HOH WAT . KA 4 HOH E 11 911 33 HOH WAT . KA 4 HOH E 12 912 47 HOH WAT . KA 4 HOH E 13 913 48 HOH WAT . KA 4 HOH E 14 914 50 HOH WAT . KA 4 HOH E 15 915 52 HOH WAT . KA 4 HOH E 16 916 61 HOH WAT . KA 4 HOH E 17 917 62 HOH WAT . KA 4 HOH E 18 918 63 HOH WAT . KA 4 HOH E 19 919 67 HOH WAT . KA 4 HOH E 20 920 71 HOH WAT . KA 4 HOH E 21 921 73 HOH WAT . KA 4 HOH E 22 922 80 HOH WAT . KA 4 HOH E 23 923 81 HOH WAT . KA 4 HOH E 24 924 83 HOH WAT . KA 4 HOH E 25 925 85 HOH WAT . KA 4 HOH E 26 926 86 HOH WAT . KA 4 HOH E 27 927 95 HOH WAT . KA 4 HOH E 28 928 96 HOH WAT . KA 4 HOH E 29 929 108 HOH WAT . KA 4 HOH E 30 930 109 HOH WAT . KA 4 HOH E 31 931 133 HOH WAT . KA 4 HOH E 32 932 135 HOH WAT . KA 4 HOH E 33 933 137 HOH WAT . KA 4 HOH E 34 934 140 HOH WAT . KA 4 HOH E 35 935 141 HOH WAT . KA 4 HOH E 36 936 144 HOH WAT . KA 4 HOH E 37 937 147 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DEQ . . . BA 3 -71.553 -50.571 8.119 1 81.66 ? C1 DEQ 201 A 1 HETATM 2 C C2 DEQ . . . BA 3 -71.805 -51.741 7.36 1 80.07 ? C2 DEQ 201 A 1 HETATM 3 C C3 DEQ . . . BA 3 -73.132 -52.181 7.176 1 79.46 ? C3 DEQ 201 A 1 HETATM 4 C C4 DEQ . . . BA 3 -74.197 -51.444 7.736 1 79.5 ? C4 DEQ 201 A 1 HETATM 5 C C5 DEQ . . . BA 3 -72.605 -49.784 8.704 1 83.87 ? C5 DEQ 201 A 1 HETATM 6 C C6 DEQ . . . BA 3 -73.966 -50.256 8.504 1 83.74 ? C6 DEQ 201 A 1 HETATM 7 C C7 DEQ . . . BA 3 -75.067 -49.528 9.054 1 86.88 ? C7 DEQ 201 A 1 HETATM 8 C C8 DEQ . . . BA 3 -74.84 -48.36 9.806 1 87.16 ? C8 DEQ 201 A 1 HETATM 9 C C9 DEQ . . . BA 3 -73.575 -47.82 10.07 1 87.04 ? C9 DEQ 201 A 1 HETATM 10 N N1 DEQ . . . BA 3 -72.391 -48.509 9.556 1 85.62 ? N1 DEQ 201 A 1 HETATM 11 C C10 DEQ . . . BA 3 -62.347 -45.985 1.139 1 82.32 ? C10 DEQ 201 A 1 HETATM 12 C C11 DEQ . . . BA 3 -62.672 -45.709 2.539 1 82.47 ? C11 DEQ 201 A 1 HETATM 13 N N2 DEQ . . . BA 3 -61.506 -45.486 3.578 1 84.73 ? N2 DEQ 201 A 1 HETATM 14 C C12 DEQ . . . BA 3 -60.135 -45.541 2.907 1 84.67 ? C12 DEQ 201 A 1 HETATM 15 C C13 DEQ . . . BA 3 -59.957 -45.808 1.558 1 87.55 ? C13 DEQ 201 A 1 HETATM 16 C C14 DEQ . . . BA 3 -60.997 -46.023 0.679 1 86.64 ? C14 DEQ 201 A 1 HETATM 17 C C15 DEQ . . . BA 3 -63.402 -46.189 0.196 1 83.56 ? C15 DEQ 201 A 1 HETATM 18 C C16 DEQ . . . BA 3 -64.765 -46.154 0.564 1 84.34 ? C16 DEQ 201 A 1 HETATM 19 C C17 DEQ . . . BA 3 -65.104 -45.897 1.902 1 87.57 ? C17 DEQ 201 A 1 HETATM 20 C C18 DEQ . . . BA 3 -64.077 -45.689 2.858 1 84.47 ? C18 DEQ 201 A 1 HETATM 21 C C19 DEQ . . . BA 3 -61.45 -45.503 5.163 1 87.43 ? C19 DEQ 201 A 1 HETATM 22 C C20 DEQ . . . BA 3 -62.895 -45.9 5.468 1 85.41 ? C20 DEQ 201 A 1 HETATM 23 C C21 DEQ . . . BA 3 -63.143 -46.052 6.976 1 81.95 ? C21 DEQ 201 A 1 HETATM 24 C C22 DEQ . . . BA 3 -64.583 -46.463 7.177 1 84.19 ? C22 DEQ 201 A 1 HETATM 25 C C23 DEQ . . . BA 3 -64.979 -46.696 8.635 1 80.04 ? C23 DEQ 201 A 1 HETATM 26 C C24 DEQ . . . BA 3 -66.469 -47.097 8.663 1 80.25 ? C24 DEQ 201 A 1 HETATM 27 C C25 DEQ . . . BA 3 -66.983 -47.378 10.064 1 83.37 ? C25 DEQ 201 A 1 HETATM 28 C C26 DEQ . . . BA 3 -68.474 -47.733 10.081 1 82.42 ? C26 DEQ 201 A 1 HETATM 29 C C27 DEQ . . . BA 3 -69.675 -48.518 9.497 1 84.56 ? C27 DEQ 201 A 1 HETATM 30 C C28 DEQ . . . BA 3 -71.021 -47.875 9.934 1 86.89 ? C28 DEQ 201 A 1 HETATM 31 C C30 DEQ . . . BA 3 -73.563 -46.541 10.925 1 90.37 ? C30 DEQ 201 A 1 HETATM 32 C C29 DEQ . . . BA 3 -58.846 -45.337 3.695 1 86.77 ? C29 DEQ 201 A 1 HETATM 33 N N4 DEQ . . . BA 3 -76.447 -49.909 8.915 1 89.02 ? N4 DEQ 201 A 1 HETATM 34 N N3 DEQ . . . BA 3 -60.492 -46.278 -0.648 1 90.28 ? N3 DEQ 201 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 34 #