data_1JTB # _model_server_result.job_id PwgT2azpVZQpghZ8dqmHNg _model_server_result.datetime_utc '2024-10-19 09:22:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jtb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":92}' # _entry.id 1JTB # _exptl.entry_id 1JTB _exptl.method 'SOLUTION NMR' # _entity.details ? _entity.formula_weight 767.534 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'COENZYME A' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JTB _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 3 A CYS 3 1_555 A SG CYS 50 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf2 A SG CYS 13 A CYS 13 1_555 A SG CYS 27 A CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 A SG CYS 28 A CYS 28 1_555 A SG CYS 73 A CYS 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 A SG CYS 48 A CYS 48 1_555 A SG CYS 87 A CYS 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? covale ? covale1 B S1P COA . A COA 92 1_555 C C1 PLM . A PLM 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.814 ? # _chem_comp.formula 'C21 H36 N7 O16 P3 S' _chem_comp.formula_weight 767.534 _chem_comp.id COA _chem_comp.mon_nstd_flag . _chem_comp.name 'COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A COA sing 70 n y N1A C6A COA doub 71 n y C2A N3A COA doub 72 n y C2A H2A COA sing 73 n n N3A C4A COA sing 74 n y C4A C5A COA doub 75 n y C4A N9A COA sing 76 n y C5A C6A COA sing 77 n y C5A N7A COA sing 78 n y C6A N6A COA sing 79 n n N6A H61A COA sing 80 n n N6A H62A COA sing 81 n n N7A C8A COA doub 82 n y C8A N9A COA sing 83 n y C8A H8A COA sing 84 n n N9A C1B COA sing 85 n n C1B C2B COA sing 86 n n C1B O4B COA sing 87 n n C1B H1B COA sing 88 n n C2B O2B COA sing 89 n n C2B C3B COA sing 90 n n C2B H2B COA sing 91 n n O2B HO2A COA sing 92 n n C3B O3B COA sing 93 n n C3B C4B COA sing 94 n n C3B H3B COA sing 95 n n O3B P3B COA sing 96 n n P3B O7A COA doub 97 n n P3B O8A COA sing 98 n n P3B O9A COA sing 99 n n O8A HOA8 COA sing 100 n n O9A HOA9 COA sing 101 n n C4B O4B COA sing 102 n n C4B C5B COA sing 103 n n C4B H4B COA sing 104 n n C5B O5B COA sing 105 n n C5B H51A COA sing 106 n n C5B H52A COA sing 107 n n O5B P1A COA sing 108 n n P1A O1A COA doub 109 n n P1A O2A COA sing 110 n n P1A O3A COA sing 111 n n O2A HOA2 COA sing 112 n n O3A P2A COA sing 113 n n P2A O4A COA doub 114 n n P2A O5A COA sing 115 n n P2A O6A COA sing 116 n n O5A HOA5 COA sing 117 n n O6A CCP COA sing 118 n n CBP CCP COA sing 119 n n CBP CDP COA sing 120 n n CBP CEP COA sing 121 n n CBP CAP COA sing 122 n n CCP H121 COA sing 123 n n CCP H122 COA sing 124 n n CDP H131 COA sing 125 n n CDP H132 COA sing 126 n n CDP H133 COA sing 127 n n CEP H141 COA sing 128 n n CEP H142 COA sing 129 n n CEP H143 COA sing 130 n n CAP OAP COA sing 131 n n CAP C9P COA sing 132 n n CAP H10 COA sing 133 n n OAP HO1 COA sing 134 n n C9P O9P COA doub 135 n n C9P N8P COA sing 136 n n N8P C7P COA sing 137 n n N8P HN8 COA sing 138 n n C7P C6P COA sing 139 n n C7P H71 COA sing 140 n n C7P H72 COA sing 141 n n C6P C5P COA sing 142 n n C6P H61 COA sing 143 n n C6P H62 COA sing 144 n n C5P O5P COA doub 145 n n C5P N4P COA sing 146 n n N4P C3P COA sing 147 n n N4P HN4 COA sing 148 n n C3P C2P COA sing 149 n n C3P H31 COA sing 150 n n C3P H32 COA sing 151 n n C2P S1P COA sing 152 n n C2P H21 COA sing 153 n n C2P H22 COA sing 154 n n S1P HS1 COA sing 155 n n # _atom_sites.entry_id 1JTB _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 COA A 1 92 92 COA COA . C 3 PLM A 1 96 96 PLM PLM . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A COA . . . B 2 0.792 12.649 7.265 1 0 ? N1A COA 92 A 1 HETATM 2 C C2A COA . . . B 2 -0.409 12.155 6.938 1 0 ? C2A COA 92 A 1 HETATM 3 N N3A COA . . . B 2 -1.242 11.47 7.723 1 0 ? N3A COA 92 A 1 HETATM 4 C C4A COA . . . B 2 -0.742 11.295 8.974 1 0 ? C4A COA 92 A 1 HETATM 5 C C5A COA . . . B 2 0.465 11.742 9.447 1 0 ? C5A COA 92 A 1 HETATM 6 C C6A COA . . . B 2 1.254 12.457 8.516 1 0 ? C6A COA 92 A 1 HETATM 7 N N6A COA . . . B 2 2.447 12.952 8.82 1 0 ? N6A COA 92 A 1 HETATM 8 N N7A COA . . . B 2 0.646 11.36 10.771 1 0 ? N7A COA 92 A 1 HETATM 9 C C8A COA . . . B 2 -0.451 10.701 11.042 1 0 ? C8A COA 92 A 1 HETATM 10 N N9A COA . . . B 2 -1.345 10.623 9.999 1 0 ? N9A COA 92 A 1 HETATM 11 C C1B COA . . . B 2 -2.695 9.988 9.943 1 0 ? C1B COA 92 A 1 HETATM 12 C C2B COA . . . B 2 -2.759 8.793 8.985 1 0 ? C2B COA 92 A 1 HETATM 13 O O2B COA . . . B 2 -3.217 9.217 7.69 1 0 ? O2B COA 92 A 1 HETATM 14 C C3B COA . . . B 2 -3.814 7.893 9.639 1 0 ? C3B COA 92 A 1 HETATM 15 O O3B COA . . . B 2 -5.169 8.308 9.226 1 0 ? O3B COA 92 A 1 HETATM 16 P P3B COA . . . B 2 -6.489 7.475 9.652 1 0 ? P3B COA 92 A 1 HETATM 17 O O7A COA . . . B 2 -7.581 7.857 8.727 1 0 ? O7A COA 92 A 1 HETATM 18 O O8A COA . . . B 2 -6.148 6.047 9.55 1 0 ? O8A COA 92 A 1 HETATM 19 O O9A COA . . . B 2 -6.759 7.905 11.033 1 0 ? O9A COA 92 A 1 HETATM 20 C C4B COA . . . B 2 -3.553 8.142 11.14 1 0 ? C4B COA 92 A 1 HETATM 21 O O4B COA . . . B 2 -2.995 9.468 11.246 1 0 ? O4B COA 92 A 1 HETATM 22 C C5B COA . . . B 2 -2.55 7.088 11.682 1 0 ? C5B COA 92 A 1 HETATM 23 O O5B COA . . . B 2 -2.001 7.418 12.984 1 0 ? O5B COA 92 A 1 HETATM 24 P P1A COA . . . B 2 -0.411 7.351 13.303 1 0 ? P1A COA 92 A 1 HETATM 25 O O1A COA . . . B 2 -0.043 5.951 13.635 1 0 ? O1A COA 92 A 1 HETATM 26 O O2A COA . . . B 2 -0.134 8.421 14.291 1 0 ? O2A COA 92 A 1 HETATM 27 O O3A COA . . . B 2 0.145 7.769 11.888 1 0 ? O3A COA 92 A 1 HETATM 28 P P2A COA . . . B 2 1.685 7.684 11.853 1 0 ? P2A COA 92 A 1 HETATM 29 O O4A COA . . . B 2 2.104 6.271 11.939 1 0 ? O4A COA 92 A 1 HETATM 30 O O5A COA . . . B 2 2.244 8.678 12.789 1 0 ? O5A COA 92 A 1 HETATM 31 O O6A COA . . . B 2 2.125 8.159 10.354 1 0 ? O6A COA 92 A 1 HETATM 32 C CBP COA . . . B 2 1.887 8.215 7.839 1 0 ? CBP COA 92 A 1 HETATM 33 C CCP COA . . . B 2 1.234 8.371 9.234 1 0 ? CCP COA 92 A 1 HETATM 34 C CDP COA . . . B 2 0.894 8.689 6.829 1 0 ? CDP COA 92 A 1 HETATM 35 C CEP COA . . . B 2 2.146 6.762 7.509 1 0 ? CEP COA 92 A 1 HETATM 36 C CAP COA . . . B 2 3.186 9.056 7.743 1 0 ? CAP COA 92 A 1 HETATM 37 O OAP COA . . . B 2 4.061 8.456 8.697 1 0 ? OAP COA 92 A 1 HETATM 38 C C9P COA . . . B 2 3.847 9.013 6.373 1 0 ? C9P COA 92 A 1 HETATM 39 O O9P COA . . . B 2 3.753 9.932 5.59 1 0 ? O9P COA 92 A 1 HETATM 40 N N8P COA . . . B 2 4.474 7.891 6.167 1 0 ? N8P COA 92 A 1 HETATM 41 C C7P COA . . . B 2 5.238 7.521 4.94 1 0 ? C7P COA 92 A 1 HETATM 42 C C6P COA . . . B 2 4.678 6.207 4.379 1 0 ? C6P COA 92 A 1 HETATM 43 C C5P COA . . . B 2 3.435 6.397 3.511 1 0 ? C5P COA 92 A 1 HETATM 44 O O5P COA . . . B 2 2.803 7.432 3.447 1 0 ? O5P COA 92 A 1 HETATM 45 N N4P COA . . . B 2 3.122 5.33 2.834 1 0 ? N4P COA 92 A 1 HETATM 46 C C3P COA . . . B 2 1.946 5.298 1.941 1 0 ? C3P COA 92 A 1 HETATM 47 C C2P COA . . . B 2 1.12 4.188 2.495 1 0 ? C2P COA 92 A 1 HETATM 48 S S1P COA . . . B 2 1.701 2.476 2.399 1 0 ? S1P COA 92 A 1 HETATM 49 H H2A COA . . . B 2 -0.747 12.317 5.924 1 0 ? H2A COA 92 A 1 HETATM 50 H H61A COA . . . B 2 2.818 12.791 9.746 1 0 ? H61A COA 92 A 1 HETATM 51 H H62A COA . . . B 2 2.965 13.481 8.133 1 0 ? H62A COA 92 A 1 HETATM 52 H H8A COA . . . B 2 -0.646 10.235 11.999 1 0 ? H8A COA 92 A 1 HETATM 53 H H1B COA . . . B 2 -3.449 10.727 9.67 1 0 ? H1B COA 92 A 1 HETATM 54 H H2B COA . . . B 2 -1.8 8.28 8.907 1 0 ? H2B COA 92 A 1 HETATM 55 H HO2A COA . . . B 2 -4.161 9.037 7.731 1 0 ? HO2A COA 92 A 1 HETATM 56 H H3B COA . . . B 2 -3.646 6.843 9.424 1 0 ? H3B COA 92 A 1 HETATM 57 H H4B COA . . . B 2 -4.476 8.09 11.713 1 0 ? H4B COA 92 A 1 HETATM 58 H H51A COA . . . B 2 -1.775 6.946 10.938 1 0 ? H51A COA 92 A 1 HETATM 59 H H52A COA . . . B 2 -3.069 6.146 11.767 1 0 ? H52A COA 92 A 1 HETATM 60 H H121 COA . . . B 2 0.396 7.691 9.291 1 0 ? H121 COA 92 A 1 HETATM 61 H H122 COA . . . B 2 0.819 9.364 9.252 1 0 ? H122 COA 92 A 1 HETATM 62 H H131 COA . . . B 2 -0.02 8.121 6.948 1 0 ? H131 COA 92 A 1 HETATM 63 H H132 COA . . . B 2 0.682 9.731 6.992 1 0 ? H132 COA 92 A 1 HETATM 64 H H133 COA . . . B 2 1.323 8.528 5.85 1 0 ? H133 COA 92 A 1 HETATM 65 H H141 COA . . . B 2 2.872 6.371 8.204 1 0 ? H141 COA 92 A 1 HETATM 66 H H142 COA . . . B 2 2.475 6.635 6.484 1 0 ? H142 COA 92 A 1 HETATM 67 H H143 COA . . . B 2 1.217 6.235 7.647 1 0 ? H143 COA 92 A 1 HETATM 68 H H10 COA . . . B 2 2.991 10.074 8.01 1 0 ? H10 COA 92 A 1 HETATM 69 H HO1 COA . . . B 2 3.428 8.271 9.435 1 0 ? HO1 COA 92 A 1 HETATM 70 H HN8 COA . . . B 2 4.38 7.289 6.931 1 0 ? HN8 COA 92 A 1 HETATM 71 H H71 COA . . . B 2 5.163 8.324 4.229 1 0 ? H71 COA 92 A 1 HETATM 72 H H72 COA . . . B 2 6.275 7.398 5.214 1 0 ? H72 COA 92 A 1 HETATM 73 H H61 COA . . . B 2 5.433 5.701 3.803 1 0 ? H61 COA 92 A 1 HETATM 74 H H62 COA . . . B 2 4.398 5.568 5.204 1 0 ? H62 COA 92 A 1 HETATM 75 H HN4 COA . . . B 2 3.688 4.543 2.923 1 0 ? HN4 COA 92 A 1 HETATM 76 H H31 COA . . . B 2 1.404 6.23 2.043 1 0 ? H31 COA 92 A 1 HETATM 77 H H32 COA . . . B 2 2.253 5.132 0.921 1 0 ? H32 COA 92 A 1 HETATM 78 H H21 COA . . . B 2 0.145 4.246 2.038 1 0 ? H21 COA 92 A 1 HETATM 79 H H22 COA . . . B 2 1.013 4.43 3.543 1 0 ? H22 COA 92 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 36 _model_server_stats.query_time_ms 4875 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 79 #