data_1JU6 # _model_server_result.job_id 4b-i5LNRER_gNEIRgu-Okg _model_server_result.datetime_utc '2025-03-31 05:59:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ju6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":316}' # _entry.id 1JU6 # _exptl.entry_id 1JU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 71.67 _cell.angle_beta 85.72 _cell.angle_gamma 75.11 _cell.entry_id 1JU6 _cell.length_a 68.138 _cell.length_b 69.633 _cell.length_c 73.958 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,I,N,O 1 1 C,D,J,K,L,M,P,Q 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 195 A CYS 195 1_555 F C6 UMP . A UMP 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? covale ? covale2 B SG CYS 195 B CYS 195 1_555 H C6 UMP . B UMP 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.832 ? covale ? covale3 C SG CYS 195 C CYS 195 1_555 J C6 UMP . C UMP 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? covale ? covale4 D SG CYS 195 D CYS 195 1_555 L C6 UMP . D UMP 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 314 n n P O2 PO4 sing 315 n n P O3 PO4 sing 316 n n P O4 PO4 sing 317 n n # _atom_sites.entry_id 1JU6 _atom_sites.fract_transf_matrix[1][1] 0.014676 _atom_sites.fract_transf_matrix[1][2] -0.003901 _atom_sites.fract_transf_matrix[1][3] 0.000102 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01486 _atom_sites.fract_transf_matrix[2][3] -0.004783 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014244 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 A 1 316 316 PO4 PO4 . F 3 UMP A 1 314 314 UMP DUM . G 4 LYA A 1 317 315 LYA LYA . H 3 UMP B 1 314 314 UMP DUM . I 4 LYA B 1 315 315 LYA LYA . J 3 UMP C 1 314 314 UMP DUM . K 4 LYA C 1 315 315 LYA LYA . L 3 UMP D 1 314 314 UMP DUM . M 4 LYA D 1 315 315 LYA LYA . N 5 HOH A 1 401 318 HOH WAT . N 5 HOH A 2 402 319 HOH WAT . N 5 HOH A 3 403 320 HOH WAT . N 5 HOH A 4 404 321 HOH WAT . N 5 HOH A 5 405 322 HOH WAT . N 5 HOH A 6 406 324 HOH WAT . N 5 HOH A 7 407 325 HOH WAT . N 5 HOH A 8 408 326 HOH WAT . N 5 HOH A 9 409 328 HOH WAT . N 5 HOH A 10 410 329 HOH WAT . N 5 HOH A 11 411 330 HOH WAT . N 5 HOH A 12 412 331 HOH WAT . O 5 HOH B 1 413 318 HOH WAT . O 5 HOH B 2 414 319 HOH WAT . O 5 HOH B 3 415 320 HOH WAT . O 5 HOH B 4 416 321 HOH WAT . O 5 HOH B 5 417 322 HOH WAT . O 5 HOH B 6 418 324 HOH WAT . O 5 HOH B 7 419 325 HOH WAT . O 5 HOH B 8 420 326 HOH WAT . O 5 HOH B 9 421 328 HOH WAT . O 5 HOH B 10 422 329 HOH WAT . O 5 HOH B 11 423 330 HOH WAT . O 5 HOH B 12 424 331 HOH WAT . P 5 HOH C 1 425 318 HOH WAT . P 5 HOH C 2 426 319 HOH WAT . P 5 HOH C 3 427 320 HOH WAT . P 5 HOH C 4 428 321 HOH WAT . P 5 HOH C 5 429 322 HOH WAT . P 5 HOH C 6 430 324 HOH WAT . P 5 HOH C 7 431 325 HOH WAT . P 5 HOH C 8 432 326 HOH WAT . P 5 HOH C 9 433 328 HOH WAT . P 5 HOH C 10 434 329 HOH WAT . P 5 HOH C 11 435 330 HOH WAT . P 5 HOH C 12 436 331 HOH WAT . P 5 HOH C 13 440 321 HOH WAT . Q 5 HOH D 1 437 318 HOH WAT . Q 5 HOH D 2 438 319 HOH WAT . Q 5 HOH D 3 439 320 HOH WAT . Q 5 HOH D 4 441 322 HOH WAT . Q 5 HOH D 5 442 324 HOH WAT . Q 5 HOH D 6 443 325 HOH WAT . Q 5 HOH D 7 444 326 HOH WAT . Q 5 HOH D 8 445 328 HOH WAT . Q 5 HOH D 9 446 329 HOH WAT . Q 5 HOH D 10 447 330 HOH WAT . Q 5 HOH D 11 448 331 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . E 2 -9.307 11.528 -20.42 1 24.38 ? P PO4 316 A 1 HETATM 2 O O1 PO4 . . . E 2 -9.864 12.427 -19.361 1 22.81 ? O1 PO4 316 A 1 HETATM 3 O O2 PO4 . . . E 2 -9.712 10.117 -20.149 1 24.58 ? O2 PO4 316 A 1 HETATM 4 O O3 PO4 . . . E 2 -7.823 11.633 -20.423 1 24.32 ? O3 PO4 316 A 1 HETATM 5 O O4 PO4 . . . E 2 -9.829 11.938 -21.756 1 23.33 ? O4 PO4 316 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #