data_1JU9 # _model_server_result.job_id YwVsUYx6d9Iz6RemlAjHFg _model_server_result.datetime_utc '2024-10-24 04:31:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1ju9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":375}' # _entry.id 1JU9 # _exptl.entry_id 1JU9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.65 _cell.angle_gamma 90 _cell.entry_id 1JU9 _cell.length_a 46.271 _cell.length_b 180.398 _cell.length_c 46.176 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JU9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 46 A CYS 46 1_555 C ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc2 A NE2 HIS 67 A HIS 67 1_555 C ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc3 A SG CYS 97 A CYS 97 1_555 D ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc4 A SG CYS 100 A CYS 100 1_555 D ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc5 A SG CYS 103 A CYS 103 1_555 D ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc6 A SG CYS 111 A CYS 111 1_555 D ZN ZN . A ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc7 A SG CYS 174 A CYS 174 1_555 C ZN ZN . A ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc8 C ZN ZN . A ZN 375 1_555 I O HOH . A HOH 437 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc9 B SG CYS 46 B CYS 46 1_555 F ZN ZN . B ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc10 B NE2 HIS 67 B HIS 67 1_555 F ZN ZN . B ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? metalc ? metalc11 B SG CYS 97 B CYS 97 1_555 G ZN ZN . B ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc12 B SG CYS 100 B CYS 100 1_555 G ZN ZN . B ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc13 B SG CYS 103 B CYS 103 1_555 G ZN ZN . B ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc14 B SG CYS 111 B CYS 111 1_555 G ZN ZN . B ZN 376 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc15 B SG CYS 174 B CYS 174 1_555 F ZN ZN . B ZN 375 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc16 F ZN ZN . B ZN 375 1_555 J O HOH . B HOH 433 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1JU9 _atom_sites.fract_transf_matrix[1][1] 0.021612 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006462 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005543 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022604 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 375 375 ZN ZN . D 2 ZN A 1 376 376 ZN ZN . E 3 NAD A 1 377 377 NAD NAD . F 2 ZN B 1 375 375 ZN ZN . G 2 ZN B 1 376 376 ZN ZN . H 3 NAD B 1 377 377 NAD NAD . I 4 HOH A 1 378 1 HOH HOH . I 4 HOH A 2 379 4 HOH HOH . I 4 HOH A 3 380 8 HOH HOH . I 4 HOH A 4 381 9 HOH HOH . I 4 HOH A 5 382 11 HOH HOH . I 4 HOH A 6 383 14 HOH HOH . I 4 HOH A 7 384 15 HOH HOH . I 4 HOH A 8 385 16 HOH HOH . I 4 HOH A 9 386 17 HOH HOH . I 4 HOH A 10 387 18 HOH HOH . I 4 HOH A 11 388 19 HOH HOH . I 4 HOH A 12 389 24 HOH HOH . I 4 HOH A 13 390 25 HOH HOH . I 4 HOH A 14 391 26 HOH HOH . I 4 HOH A 15 392 29 HOH HOH . I 4 HOH A 16 393 30 HOH HOH . I 4 HOH A 17 394 32 HOH HOH . I 4 HOH A 18 395 36 HOH HOH . I 4 HOH A 19 396 37 HOH HOH . I 4 HOH A 20 397 38 HOH HOH . I 4 HOH A 21 398 39 HOH HOH . I 4 HOH A 22 399 41 HOH HOH . I 4 HOH A 23 400 42 HOH HOH . I 4 HOH A 24 401 44 HOH HOH . I 4 HOH A 25 402 45 HOH HOH . I 4 HOH A 26 403 46 HOH HOH . I 4 HOH A 27 404 47 HOH HOH . I 4 HOH A 28 405 48 HOH HOH . I 4 HOH A 29 406 50 HOH HOH . I 4 HOH A 30 407 52 HOH HOH . I 4 HOH A 31 408 53 HOH HOH . I 4 HOH A 32 409 55 HOH HOH . I 4 HOH A 33 410 57 HOH HOH . I 4 HOH A 34 411 58 HOH HOH . I 4 HOH A 35 412 60 HOH HOH . I 4 HOH A 36 413 61 HOH HOH . I 4 HOH A 37 414 64 HOH HOH . I 4 HOH A 38 415 66 HOH HOH . I 4 HOH A 39 416 67 HOH HOH . I 4 HOH A 40 417 71 HOH HOH . I 4 HOH A 41 418 72 HOH HOH . I 4 HOH A 42 419 73 HOH HOH . I 4 HOH A 43 420 74 HOH HOH . I 4 HOH A 44 421 78 HOH HOH . I 4 HOH A 45 422 79 HOH HOH . I 4 HOH A 46 423 82 HOH HOH . I 4 HOH A 47 424 83 HOH HOH . I 4 HOH A 48 425 85 HOH HOH . I 4 HOH A 49 426 89 HOH HOH . I 4 HOH A 50 427 90 HOH HOH . I 4 HOH A 51 428 93 HOH HOH . I 4 HOH A 52 429 95 HOH HOH . I 4 HOH A 53 430 99 HOH HOH . I 4 HOH A 54 431 100 HOH HOH . I 4 HOH A 55 432 101 HOH HOH . I 4 HOH A 56 433 102 HOH HOH . I 4 HOH A 57 434 105 HOH HOH . I 4 HOH A 58 435 112 HOH HOH . I 4 HOH A 59 436 113 HOH HOH . I 4 HOH A 60 437 114 HOH HOH . I 4 HOH A 61 438 115 HOH HOH . I 4 HOH A 62 439 116 HOH HOH . I 4 HOH A 63 440 117 HOH HOH . I 4 HOH A 64 441 118 HOH HOH . I 4 HOH A 65 442 119 HOH HOH . I 4 HOH A 66 443 120 HOH HOH . I 4 HOH A 67 444 121 HOH HOH . I 4 HOH A 68 445 122 HOH HOH . I 4 HOH A 69 446 123 HOH HOH . I 4 HOH A 70 447 124 HOH HOH . I 4 HOH A 71 448 125 HOH HOH . I 4 HOH A 72 449 126 HOH HOH . I 4 HOH A 73 450 127 HOH HOH . I 4 HOH A 74 451 141 HOH HOH . I 4 HOH A 75 452 143 HOH HOH . I 4 HOH A 76 453 144 HOH HOH . I 4 HOH A 77 454 145 HOH HOH . I 4 HOH A 78 455 146 HOH HOH . I 4 HOH A 79 456 147 HOH HOH . I 4 HOH A 80 457 148 HOH HOH . I 4 HOH A 81 458 149 HOH HOH . I 4 HOH A 82 459 152 HOH HOH . I 4 HOH A 83 460 153 HOH HOH . I 4 HOH A 84 461 159 HOH HOH . I 4 HOH A 85 462 162 HOH HOH . I 4 HOH A 86 463 164 HOH HOH . J 4 HOH B 1 378 2 HOH HOH . J 4 HOH B 2 379 3 HOH HOH . J 4 HOH B 3 380 5 HOH HOH . J 4 HOH B 4 381 6 HOH HOH . J 4 HOH B 5 382 7 HOH HOH . J 4 HOH B 6 383 10 HOH HOH . J 4 HOH B 7 384 12 HOH HOH . J 4 HOH B 8 385 13 HOH HOH . J 4 HOH B 9 386 20 HOH HOH . J 4 HOH B 10 387 21 HOH HOH . J 4 HOH B 11 388 22 HOH HOH . J 4 HOH B 12 389 23 HOH HOH . J 4 HOH B 13 390 27 HOH HOH . J 4 HOH B 14 391 28 HOH HOH . J 4 HOH B 15 392 31 HOH HOH . J 4 HOH B 16 393 33 HOH HOH . J 4 HOH B 17 394 34 HOH HOH . J 4 HOH B 18 395 35 HOH HOH . J 4 HOH B 19 396 40 HOH HOH . J 4 HOH B 20 397 43 HOH HOH . J 4 HOH B 21 398 49 HOH HOH . J 4 HOH B 22 399 51 HOH HOH . J 4 HOH B 23 400 54 HOH HOH . J 4 HOH B 24 401 56 HOH HOH . J 4 HOH B 25 402 59 HOH HOH . J 4 HOH B 26 403 62 HOH HOH . J 4 HOH B 27 404 63 HOH HOH . J 4 HOH B 28 405 65 HOH HOH . J 4 HOH B 29 406 68 HOH HOH . J 4 HOH B 30 407 69 HOH HOH . J 4 HOH B 31 408 70 HOH HOH . J 4 HOH B 32 409 75 HOH HOH . J 4 HOH B 33 410 76 HOH HOH . J 4 HOH B 34 411 77 HOH HOH . J 4 HOH B 35 412 80 HOH HOH . J 4 HOH B 36 413 81 HOH HOH . J 4 HOH B 37 414 84 HOH HOH . J 4 HOH B 38 415 86 HOH HOH . J 4 HOH B 39 416 87 HOH HOH . J 4 HOH B 40 417 88 HOH HOH . J 4 HOH B 41 418 91 HOH HOH . J 4 HOH B 42 419 92 HOH HOH . J 4 HOH B 43 420 94 HOH HOH . J 4 HOH B 44 421 96 HOH HOH . J 4 HOH B 45 422 97 HOH HOH . J 4 HOH B 46 423 98 HOH HOH . J 4 HOH B 47 424 103 HOH HOH . J 4 HOH B 48 425 104 HOH HOH . J 4 HOH B 49 426 106 HOH HOH . J 4 HOH B 50 427 107 HOH HOH . J 4 HOH B 51 428 108 HOH HOH . J 4 HOH B 52 429 109 HOH HOH . J 4 HOH B 53 430 110 HOH HOH . J 4 HOH B 54 431 111 HOH HOH . J 4 HOH B 55 432 128 HOH HOH . J 4 HOH B 56 433 129 HOH HOH . J 4 HOH B 57 434 130 HOH HOH . J 4 HOH B 58 435 131 HOH HOH . J 4 HOH B 59 436 132 HOH HOH . J 4 HOH B 60 437 133 HOH HOH . J 4 HOH B 61 438 134 HOH HOH . J 4 HOH B 62 439 135 HOH HOH . J 4 HOH B 63 440 136 HOH HOH . J 4 HOH B 64 441 137 HOH HOH . J 4 HOH B 65 442 138 HOH HOH . J 4 HOH B 66 443 139 HOH HOH . J 4 HOH B 67 444 140 HOH HOH . J 4 HOH B 68 445 142 HOH HOH . J 4 HOH B 69 446 150 HOH HOH . J 4 HOH B 70 447 151 HOH HOH . J 4 HOH B 71 448 154 HOH HOH . J 4 HOH B 72 449 155 HOH HOH . J 4 HOH B 73 450 156 HOH HOH . J 4 HOH B 74 451 157 HOH HOH . J 4 HOH B 75 452 158 HOH HOH . J 4 HOH B 76 453 160 HOH HOH . J 4 HOH B 77 454 161 HOH HOH . J 4 HOH B 78 455 163 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 0.894 _atom_site.Cartn_y 1.518 _atom_site.Cartn_z 11.091 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.92 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 375 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 236 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #