data_1JVB # _model_server_result.job_id ytV273Gbt0kelehA_uvPQg _model_server_result.datetime_utc '2024-11-24 14:38:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jvb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":500}' # _entry.id 1JVB # _exptl.entry_id 1JVB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1JVB _cell.length_a 125.316 _cell.length_b 125.316 _cell.length_c 115.59 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JVB _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 3 'crystal symmetry operation' 10_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 1 A MSE 1 1_555 A N ARG 2 A ARG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C HIS 43 A HIS 43 1_555 A N MSE 44 A MSE 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C MSE 44 A MSE 44 1_555 A N ARG 45 A ARG 45 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale4 A C TYR 137 A TYR 137 1_555 A N MSE 138 A MSE 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale5 A C MSE 138 A MSE 138 1_555 A N TYR 139 A TYR 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale6 A C THR 185 A THR 185 1_555 A N MSE 186 A MSE 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale7 A C MSE 186 A MSE 186 1_555 A N ALA 187 A ALA 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale8 A C VAL 268 A VAL 268 1_555 A N MSE 269 A MSE 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 A C MSE 269 A MSE 269 1_555 A N VAL 270 A VAL 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale10 A C ILE 305 A ILE 305 1_555 A N MSE 306 A MSE 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale11 A C MSE 306 A MSE 306 1_555 A N ARG 307 A ARG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale12 A C PRO 316 A PRO 316 1_555 A N MSE 317 A MSE 317 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale13 A C MSE 317 A MSE 317 1_555 A N ILE 318 A ILE 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale14 A C THR 321 A THR 321 1_555 A N MSE 322 A MSE 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale15 A C MSE 322 A MSE 322 1_555 A N LYS 323 A LYS 323 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? metalc ? metalc1 A SG CYS 38 A CYS 38 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? metalc ? metalc2 A NE2 HIS 68 A HIS 68 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 A OE2 GLU 69 A GLU 69 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? metalc ? metalc4 A OE2 GLU 98 A GLU 98 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? metalc ? metalc5 A SG CYS 101 A CYS 101 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc6 A SG CYS 104 A CYS 104 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.24 ? metalc ? metalc7 A SG CYS 112 A CYS 112 1_555 B ZN ZN . A ZN 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? metalc ? metalc8 A SG CYS 154 A CYS 154 1_555 C ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1JVB _atom_sites.fract_transf_matrix[1][1] 0.00798 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00798 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008651 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 400 400 ZN ZN . C 2 ZN A 1 500 500 ZN ZN . D 3 HOH A 1 501 1 HOH HOH . D 3 HOH A 2 502 2 HOH HOH . D 3 HOH A 3 503 3 HOH HOH . D 3 HOH A 4 504 4 HOH HOH . D 3 HOH A 5 505 5 HOH HOH . D 3 HOH A 6 506 6 HOH HOH . D 3 HOH A 7 507 7 HOH HOH . D 3 HOH A 8 508 8 HOH HOH . D 3 HOH A 9 509 9 HOH HOH . D 3 HOH A 10 510 10 HOH HOH . D 3 HOH A 11 511 11 HOH HOH . D 3 HOH A 12 512 12 HOH HOH . D 3 HOH A 13 513 13 HOH HOH . D 3 HOH A 14 514 14 HOH HOH . D 3 HOH A 15 515 15 HOH HOH . D 3 HOH A 16 516 16 HOH HOH . D 3 HOH A 17 517 17 HOH HOH . D 3 HOH A 18 518 18 HOH HOH . D 3 HOH A 19 519 19 HOH HOH . D 3 HOH A 20 520 20 HOH HOH . D 3 HOH A 21 521 21 HOH HOH . D 3 HOH A 22 522 22 HOH HOH . D 3 HOH A 23 523 23 HOH HOH . D 3 HOH A 24 524 24 HOH HOH . D 3 HOH A 25 525 25 HOH HOH . D 3 HOH A 26 526 26 HOH HOH . D 3 HOH A 27 527 27 HOH HOH . D 3 HOH A 28 528 28 HOH HOH . D 3 HOH A 29 529 29 HOH HOH . D 3 HOH A 30 530 30 HOH HOH . D 3 HOH A 31 531 31 HOH HOH . D 3 HOH A 32 532 32 HOH HOH . D 3 HOH A 33 533 33 HOH HOH . D 3 HOH A 34 534 34 HOH HOH . D 3 HOH A 35 535 35 HOH HOH . D 3 HOH A 36 536 36 HOH HOH . D 3 HOH A 37 537 37 HOH HOH . D 3 HOH A 38 538 38 HOH HOH . D 3 HOH A 39 539 39 HOH HOH . D 3 HOH A 40 540 40 HOH HOH . D 3 HOH A 41 541 41 HOH HOH . D 3 HOH A 42 542 42 HOH HOH . D 3 HOH A 43 543 43 HOH HOH . D 3 HOH A 44 544 44 HOH HOH . D 3 HOH A 45 545 45 HOH HOH . D 3 HOH A 46 546 46 HOH HOH . D 3 HOH A 47 547 47 HOH HOH . D 3 HOH A 48 548 48 HOH HOH . D 3 HOH A 49 549 49 HOH HOH . D 3 HOH A 50 550 50 HOH HOH . D 3 HOH A 51 551 51 HOH HOH . D 3 HOH A 52 552 52 HOH HOH . D 3 HOH A 53 553 53 HOH HOH . D 3 HOH A 54 554 54 HOH HOH . D 3 HOH A 55 555 55 HOH HOH . D 3 HOH A 56 556 56 HOH HOH . D 3 HOH A 57 557 57 HOH HOH . D 3 HOH A 58 558 58 HOH HOH . D 3 HOH A 59 559 59 HOH HOH . D 3 HOH A 60 560 60 HOH HOH . D 3 HOH A 61 561 61 HOH HOH . D 3 HOH A 62 562 62 HOH HOH . D 3 HOH A 63 563 63 HOH HOH . D 3 HOH A 64 564 64 HOH HOH . D 3 HOH A 65 565 65 HOH HOH . D 3 HOH A 66 566 66 HOH HOH . D 3 HOH A 67 567 67 HOH HOH . D 3 HOH A 68 568 68 HOH HOH . D 3 HOH A 69 569 69 HOH HOH . D 3 HOH A 70 570 70 HOH HOH . D 3 HOH A 71 571 71 HOH HOH . D 3 HOH A 72 572 72 HOH HOH . D 3 HOH A 73 573 73 HOH HOH . D 3 HOH A 74 574 74 HOH HOH . D 3 HOH A 75 575 75 HOH HOH . D 3 HOH A 76 576 76 HOH HOH . D 3 HOH A 77 577 77 HOH HOH . D 3 HOH A 78 578 78 HOH HOH . D 3 HOH A 79 579 79 HOH HOH . D 3 HOH A 80 580 80 HOH HOH . D 3 HOH A 81 581 81 HOH HOH . D 3 HOH A 82 582 82 HOH HOH . D 3 HOH A 83 583 83 HOH HOH . D 3 HOH A 84 584 84 HOH HOH . D 3 HOH A 85 585 85 HOH HOH . D 3 HOH A 86 586 86 HOH HOH . D 3 HOH A 87 587 87 HOH HOH . D 3 HOH A 88 588 88 HOH HOH . D 3 HOH A 89 589 89 HOH HOH . D 3 HOH A 90 590 90 HOH HOH . D 3 HOH A 91 591 91 HOH HOH . D 3 HOH A 92 592 92 HOH HOH . D 3 HOH A 93 593 93 HOH HOH . D 3 HOH A 94 594 94 HOH HOH . D 3 HOH A 95 595 95 HOH HOH . D 3 HOH A 96 596 96 HOH HOH . D 3 HOH A 97 597 97 HOH HOH . D 3 HOH A 98 598 98 HOH HOH . D 3 HOH A 99 599 99 HOH HOH . D 3 HOH A 100 600 100 HOH HOH . D 3 HOH A 101 601 101 HOH HOH . D 3 HOH A 102 602 102 HOH HOH . D 3 HOH A 103 603 103 HOH HOH . D 3 HOH A 104 604 104 HOH HOH . D 3 HOH A 105 605 105 HOH HOH . D 3 HOH A 106 606 106 HOH HOH . D 3 HOH A 107 607 107 HOH HOH . D 3 HOH A 108 608 108 HOH HOH . D 3 HOH A 109 609 109 HOH HOH . D 3 HOH A 110 610 110 HOH HOH . D 3 HOH A 111 611 111 HOH HOH . D 3 HOH A 112 612 112 HOH HOH . D 3 HOH A 113 613 113 HOH HOH . D 3 HOH A 114 614 114 HOH HOH . D 3 HOH A 115 615 115 HOH HOH . D 3 HOH A 116 616 116 HOH HOH . D 3 HOH A 117 617 117 HOH HOH . D 3 HOH A 118 618 118 HOH HOH . D 3 HOH A 119 619 119 HOH HOH . D 3 HOH A 120 620 120 HOH HOH . D 3 HOH A 121 621 121 HOH HOH . D 3 HOH A 122 622 122 HOH HOH . D 3 HOH A 123 623 123 HOH HOH . D 3 HOH A 124 624 124 HOH HOH . D 3 HOH A 125 625 125 HOH HOH . D 3 HOH A 126 626 126 HOH HOH . D 3 HOH A 127 627 127 HOH HOH . D 3 HOH A 128 628 128 HOH HOH . D 3 HOH A 129 629 129 HOH HOH . D 3 HOH A 130 630 130 HOH HOH . D 3 HOH A 131 631 131 HOH HOH . D 3 HOH A 132 632 132 HOH HOH . D 3 HOH A 133 633 133 HOH HOH . D 3 HOH A 134 634 134 HOH HOH . D 3 HOH A 135 635 135 HOH HOH . D 3 HOH A 136 636 136 HOH HOH . D 3 HOH A 137 637 137 HOH HOH . D 3 HOH A 138 638 138 HOH HOH . D 3 HOH A 139 639 139 HOH HOH . D 3 HOH A 140 640 140 HOH HOH . D 3 HOH A 141 641 141 HOH HOH . D 3 HOH A 142 642 142 HOH HOH . D 3 HOH A 143 643 143 HOH HOH . D 3 HOH A 144 644 144 HOH HOH . D 3 HOH A 145 645 145 HOH HOH . D 3 HOH A 146 646 146 HOH HOH . D 3 HOH A 147 647 147 HOH HOH . D 3 HOH A 148 648 148 HOH HOH . D 3 HOH A 149 649 149 HOH HOH . D 3 HOH A 150 650 150 HOH HOH . D 3 HOH A 151 651 151 HOH HOH . D 3 HOH A 152 652 152 HOH HOH . D 3 HOH A 153 653 153 HOH HOH . D 3 HOH A 154 654 154 HOH HOH . D 3 HOH A 155 655 155 HOH HOH . D 3 HOH A 156 656 156 HOH HOH . D 3 HOH A 157 657 157 HOH HOH . D 3 HOH A 158 658 158 HOH HOH . D 3 HOH A 159 659 159 HOH HOH . D 3 HOH A 160 660 160 HOH HOH . D 3 HOH A 161 661 161 HOH HOH . D 3 HOH A 162 662 162 HOH HOH . D 3 HOH A 163 663 163 HOH HOH . D 3 HOH A 164 664 164 HOH HOH . D 3 HOH A 165 665 165 HOH HOH . D 3 HOH A 166 666 166 HOH HOH . D 3 HOH A 167 667 167 HOH HOH . D 3 HOH A 168 668 168 HOH HOH . D 3 HOH A 169 669 169 HOH HOH . D 3 HOH A 170 670 170 HOH HOH . D 3 HOH A 171 671 171 HOH HOH . D 3 HOH A 172 672 172 HOH HOH . D 3 HOH A 173 673 173 HOH HOH . D 3 HOH A 174 674 174 HOH HOH . D 3 HOH A 175 675 175 HOH HOH . D 3 HOH A 176 676 176 HOH HOH . D 3 HOH A 177 677 177 HOH HOH . D 3 HOH A 178 678 178 HOH HOH . D 3 HOH A 179 679 179 HOH HOH . D 3 HOH A 180 680 180 HOH HOH . D 3 HOH A 181 681 181 HOH HOH . D 3 HOH A 182 682 182 HOH HOH . D 3 HOH A 183 683 183 HOH HOH . D 3 HOH A 184 684 184 HOH HOH . D 3 HOH A 185 685 185 HOH HOH . D 3 HOH A 186 686 186 HOH HOH . D 3 HOH A 187 687 187 HOH HOH . D 3 HOH A 188 688 188 HOH HOH . D 3 HOH A 189 689 189 HOH HOH . D 3 HOH A 190 690 190 HOH HOH . D 3 HOH A 191 691 191 HOH HOH . D 3 HOH A 192 692 192 HOH HOH . D 3 HOH A 193 693 193 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -25.123 _atom_site.Cartn_y -1.819 _atom_site.Cartn_z 15.969 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 27.72 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 500 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #