data_1JVI
#
_model_server_result.job_id            I5QramM3rsaQ-9uKXImDIA 
_model_server_result.datetime_utc      '2024-10-11 01:24:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          1jvi 
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_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
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_entry.id    1JVI 
#
_exptl.entry_id    1JVI 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
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_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            1JVI 
_cell.length_a            62.095 
_cell.length_b            62.095 
_cell.length_c            150.051 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 1JVI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 65 2 2' 
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_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -31.0475 53.775847 -25.0085 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 41 A CYS 41 1_555 E SD HCS . A HCS 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
covale ? covale2 A C GLY 83 A GLY 83 1_555 A N OCS 84 A OCS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? 
covale ? covale3 A C OCS 84 A OCS 84 1_555 A N GLN 85 A GLN 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
metalc ? metalc1 A NE2 HIS 54 A HIS 54 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? 
metalc ? metalc2 A NE2 HIS 58 A HIS 58 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? 
metalc ? metalc3 A SG CYS 126 A CYS 126 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 356 n n 
S O2 SO4 doub 357 n n 
S O3 SO4 sing 358 n n 
S O4 SO4 sing 359 n n 
#
_atom_sites.entry_id                     1JVI 
_atom_sites.fract_transf_matrix[1][1]    0.016104 
_atom_sites.fract_transf_matrix[1][2]    0.009298 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018596 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006664 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 300 300 ZN ZN . 
C 3 SO4 A 1 501 501 SO4 SO4 . 
D 4 RHC A 1 401 401 RHC RHC . 
E 5 HCS A 1 402 402 HCS HCS . 
F 6 HOH A 1 502 1 HOH HOH . 
F 6 HOH A 2 503 2 HOH HOH . 
F 6 HOH A 3 504 3 HOH HOH . 
F 6 HOH A 4 505 4 HOH HOH . 
F 6 HOH A 5 506 5 HOH HOH . 
F 6 HOH A 6 507 6 HOH HOH . 
F 6 HOH A 7 508 7 HOH HOH . 
F 6 HOH A 8 509 8 HOH HOH . 
F 6 HOH A 9 510 9 HOH HOH . 
F 6 HOH A 10 511 10 HOH HOH . 
F 6 HOH A 11 512 11 HOH HOH . 
F 6 HOH A 12 513 12 HOH HOH . 
F 6 HOH A 13 514 13 HOH HOH . 
F 6 HOH A 14 515 14 HOH HOH . 
F 6 HOH A 15 516 15 HOH HOH . 
F 6 HOH A 16 517 16 HOH HOH . 
F 6 HOH A 17 518 17 HOH HOH . 
F 6 HOH A 18 519 18 HOH HOH . 
F 6 HOH A 19 520 19 HOH HOH . 
F 6 HOH A 20 521 20 HOH HOH . 
F 6 HOH A 21 522 21 HOH HOH . 
F 6 HOH A 22 523 22 HOH HOH . 
F 6 HOH A 23 524 23 HOH HOH . 
F 6 HOH A 24 525 24 HOH HOH . 
F 6 HOH A 25 526 25 HOH HOH . 
F 6 HOH A 26 527 26 HOH HOH . 
F 6 HOH A 27 528 27 HOH HOH . 
F 6 HOH A 28 529 28 HOH HOH . 
F 6 HOH A 29 530 29 HOH HOH . 
F 6 HOH A 30 531 30 HOH HOH . 
F 6 HOH A 31 532 31 HOH HOH . 
F 6 HOH A 32 533 32 HOH HOH . 
F 6 HOH A 33 534 33 HOH HOH . 
F 6 HOH A 34 535 34 HOH HOH . 
F 6 HOH A 35 536 35 HOH HOH . 
F 6 HOH A 36 537 36 HOH HOH . 
F 6 HOH A 37 538 37 HOH HOH . 
F 6 HOH A 38 539 38 HOH HOH . 
F 6 HOH A 39 540 39 HOH HOH . 
F 6 HOH A 40 541 40 HOH HOH . 
F 6 HOH A 41 542 41 HOH HOH . 
F 6 HOH A 42 543 42 HOH HOH . 
F 6 HOH A 43 544 43 HOH HOH . 
F 6 HOH A 44 545 44 HOH HOH . 
F 6 HOH A 45 546 45 HOH HOH . 
F 6 HOH A 46 547 46 HOH HOH . 
F 6 HOH A 47 548 47 HOH HOH . 
F 6 HOH A 48 549 48 HOH HOH . 
F 6 HOH A 49 550 49 HOH HOH . 
F 6 HOH A 50 551 50 HOH HOH . 
F 6 HOH A 51 552 51 HOH HOH . 
F 6 HOH A 52 553 52 HOH HOH . 
F 6 HOH A 53 554 53 HOH HOH . 
F 6 HOH A 54 555 54 HOH HOH . 
F 6 HOH A 55 556 55 HOH HOH . 
F 6 HOH A 56 557 56 HOH HOH . 
F 6 HOH A 57 558 57 HOH HOH . 
F 6 HOH A 58 559 58 HOH HOH . 
F 6 HOH A 59 560 59 HOH HOH . 
F 6 HOH A 60 561 60 HOH HOH . 
F 6 HOH A 61 562 61 HOH HOH . 
F 6 HOH A 62 563 62 HOH HOH . 
F 6 HOH A 63 564 63 HOH HOH . 
F 6 HOH A 64 565 64 HOH HOH . 
F 6 HOH A 65 566 65 HOH HOH . 
F 6 HOH A 66 567 66 HOH HOH . 
F 6 HOH A 67 568 67 HOH HOH . 
F 6 HOH A 68 569 68 HOH HOH . 
F 6 HOH A 69 570 69 HOH HOH . 
F 6 HOH A 70 571 70 HOH HOH . 
F 6 HOH A 71 572 71 HOH HOH . 
F 6 HOH A 72 573 72 HOH HOH . 
F 6 HOH A 73 574 73 HOH HOH . 
F 6 HOH A 74 575 74 HOH HOH . 
F 6 HOH A 75 576 75 HOH HOH . 
F 6 HOH A 76 577 76 HOH HOH . 
F 6 HOH A 77 578 77 HOH HOH . 
F 6 HOH A 78 579 78 HOH HOH . 
F 6 HOH A 79 580 79 HOH HOH . 
F 6 HOH A 80 581 80 HOH HOH . 
F 6 HOH A 81 582 81 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . C 3 -8.315 31.132 4.764 1 51.39 ? S SO4 501 A 1 
HETATM 2 O O1 SO4 . . . C 3 -6.989 30.99 4.115 1 49.73 ? O1 SO4 501 A 1 
HETATM 3 O O2 SO4 . . . C 3 -8.159 31.856 6.041 1 67.25 ? O2 SO4 501 A 1 
HETATM 4 O O3 SO4 . . . C 3 -8.904 29.808 5.042 1 48.61 ? O3 SO4 501 A 1 
HETATM 5 O O4 SO4 . . . C 3 -9.198 31.889 3.856 1 72.29 ? O4 SO4 501 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           5 
#