data_1JVI # _model_server_result.job_id n6G4w7-Jje5WjuwGFvvdcg _model_server_result.datetime_utc '2024-12-03 11:18:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jvi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":501}' # _entry.id 1JVI # _exptl.entry_id 1JVI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 1JVI _cell.length_a 62.095 _cell.length_b 62.095 _cell.length_c 150.051 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JVI _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -31.0475 53.775847 -25.0085 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 41 A CYS 41 1_555 E SD HCS . A HCS 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? covale ? covale2 A C GLY 83 A GLY 83 1_555 A N OCS 84 A OCS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C OCS 84 A OCS 84 1_555 A N GLN 85 A GLN 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 A NE2 HIS 54 A HIS 54 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc2 A NE2 HIS 58 A HIS 58 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc3 A SG CYS 126 A CYS 126 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 356 n n S O2 SO4 doub 357 n n S O3 SO4 sing 358 n n S O4 SO4 sing 359 n n # _atom_sites.entry_id 1JVI _atom_sites.fract_transf_matrix[1][1] 0.016104 _atom_sites.fract_transf_matrix[1][2] 0.009298 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006664 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 300 300 ZN ZN . C 3 SO4 A 1 501 501 SO4 SO4 . D 4 RHC A 1 401 401 RHC RHC . E 5 HCS A 1 402 402 HCS HCS . F 6 HOH A 1 502 1 HOH HOH . F 6 HOH A 2 503 2 HOH HOH . F 6 HOH A 3 504 3 HOH HOH . F 6 HOH A 4 505 4 HOH HOH . F 6 HOH A 5 506 5 HOH HOH . F 6 HOH A 6 507 6 HOH HOH . F 6 HOH A 7 508 7 HOH HOH . F 6 HOH A 8 509 8 HOH HOH . F 6 HOH A 9 510 9 HOH HOH . F 6 HOH A 10 511 10 HOH HOH . F 6 HOH A 11 512 11 HOH HOH . F 6 HOH A 12 513 12 HOH HOH . F 6 HOH A 13 514 13 HOH HOH . F 6 HOH A 14 515 14 HOH HOH . F 6 HOH A 15 516 15 HOH HOH . F 6 HOH A 16 517 16 HOH HOH . F 6 HOH A 17 518 17 HOH HOH . F 6 HOH A 18 519 18 HOH HOH . F 6 HOH A 19 520 19 HOH HOH . F 6 HOH A 20 521 20 HOH HOH . F 6 HOH A 21 522 21 HOH HOH . F 6 HOH A 22 523 22 HOH HOH . F 6 HOH A 23 524 23 HOH HOH . F 6 HOH A 24 525 24 HOH HOH . F 6 HOH A 25 526 25 HOH HOH . F 6 HOH A 26 527 26 HOH HOH . F 6 HOH A 27 528 27 HOH HOH . F 6 HOH A 28 529 28 HOH HOH . F 6 HOH A 29 530 29 HOH HOH . F 6 HOH A 30 531 30 HOH HOH . F 6 HOH A 31 532 31 HOH HOH . F 6 HOH A 32 533 32 HOH HOH . F 6 HOH A 33 534 33 HOH HOH . F 6 HOH A 34 535 34 HOH HOH . F 6 HOH A 35 536 35 HOH HOH . F 6 HOH A 36 537 36 HOH HOH . F 6 HOH A 37 538 37 HOH HOH . F 6 HOH A 38 539 38 HOH HOH . F 6 HOH A 39 540 39 HOH HOH . F 6 HOH A 40 541 40 HOH HOH . F 6 HOH A 41 542 41 HOH HOH . F 6 HOH A 42 543 42 HOH HOH . F 6 HOH A 43 544 43 HOH HOH . F 6 HOH A 44 545 44 HOH HOH . F 6 HOH A 45 546 45 HOH HOH . F 6 HOH A 46 547 46 HOH HOH . F 6 HOH A 47 548 47 HOH HOH . F 6 HOH A 48 549 48 HOH HOH . F 6 HOH A 49 550 49 HOH HOH . F 6 HOH A 50 551 50 HOH HOH . F 6 HOH A 51 552 51 HOH HOH . F 6 HOH A 52 553 52 HOH HOH . F 6 HOH A 53 554 53 HOH HOH . F 6 HOH A 54 555 54 HOH HOH . F 6 HOH A 55 556 55 HOH HOH . F 6 HOH A 56 557 56 HOH HOH . F 6 HOH A 57 558 57 HOH HOH . F 6 HOH A 58 559 58 HOH HOH . F 6 HOH A 59 560 59 HOH HOH . F 6 HOH A 60 561 60 HOH HOH . F 6 HOH A 61 562 61 HOH HOH . F 6 HOH A 62 563 62 HOH HOH . F 6 HOH A 63 564 63 HOH HOH . F 6 HOH A 64 565 64 HOH HOH . F 6 HOH A 65 566 65 HOH HOH . F 6 HOH A 66 567 66 HOH HOH . F 6 HOH A 67 568 67 HOH HOH . F 6 HOH A 68 569 68 HOH HOH . F 6 HOH A 69 570 69 HOH HOH . F 6 HOH A 70 571 70 HOH HOH . F 6 HOH A 71 572 71 HOH HOH . F 6 HOH A 72 573 72 HOH HOH . F 6 HOH A 73 574 73 HOH HOH . F 6 HOH A 74 575 74 HOH HOH . F 6 HOH A 75 576 75 HOH HOH . F 6 HOH A 76 577 76 HOH HOH . F 6 HOH A 77 578 77 HOH HOH . F 6 HOH A 78 579 78 HOH HOH . F 6 HOH A 79 580 79 HOH HOH . F 6 HOH A 80 581 80 HOH HOH . F 6 HOH A 81 582 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . C 3 -8.315 31.132 4.764 1 51.39 ? S SO4 501 A 1 HETATM 2 O O1 SO4 . . . C 3 -6.989 30.99 4.115 1 49.73 ? O1 SO4 501 A 1 HETATM 3 O O2 SO4 . . . C 3 -8.159 31.856 6.041 1 67.25 ? O2 SO4 501 A 1 HETATM 4 O O3 SO4 . . . C 3 -8.904 29.808 5.042 1 48.61 ? O3 SO4 501 A 1 HETATM 5 O O4 SO4 . . . C 3 -9.198 31.889 3.856 1 72.29 ? O4 SO4 501 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 123 _model_server_stats.create_model_time_ms 43 _model_server_stats.query_time_ms 359 _model_server_stats.encode_time_ms 42 _model_server_stats.element_count 5 #