data_1JXA # _model_server_result.job_id maPFjNCazRORWLYMrPLfbg _model_server_result.datetime_utc '2024-10-24 04:28:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1jxa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":700}' # _entry.id 1JXA # _exptl.entry_id 1JXA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 260.136 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUCOSE-6-PHOSPHATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.4 _cell.angle_gamma 90 _cell.entry_id 1JXA _cell.length_a 131.4 _cell.length_b 112.4 _cell.length_c 185.1 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1JXA _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,F 1 1,2 B,C,E,G,H 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B OG SER 347 B SER 347 1_555 E O2P G6Q . B G6Q 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? covale ? covale2 B OE1 GLU 488 B GLU 488 1_555 E O1 G6Q . B G6Q 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? # _chem_comp.formula 'C6 H13 O9 P' _chem_comp.formula_weight 260.136 _chem_comp.id G6Q _chem_comp.mon_nstd_flag . _chem_comp.name GLUCOSE-6-PHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 G6Q sing 83 n n C1 O1 G6Q doub 84 n n C1 H1 G6Q sing 85 n n C2 C3 G6Q sing 86 n n C2 O2 G6Q sing 87 n n C2 H2 G6Q sing 88 n n C3 C4 G6Q sing 89 n n C3 O3 G6Q sing 90 n n C3 H3 G6Q sing 91 n n C4 C5 G6Q sing 92 n n C4 O4 G6Q sing 93 n n C4 H4 G6Q sing 94 n n C5 C6 G6Q sing 95 n n C5 O5 G6Q sing 96 n n C5 H5 G6Q sing 97 n n C6 O6 G6Q sing 98 n n C6 H61 G6Q sing 99 n n C6 H62 G6Q sing 100 n n O2 HO2 G6Q sing 101 n n O3 HO3 G6Q sing 102 n n O4 HO4 G6Q sing 103 n n O5 HO5 G6Q sing 104 n n O6 P G6Q sing 105 n n P O1P G6Q doub 106 n n P O2P G6Q sing 107 n n P O3P G6Q sing 108 n n O2P HOP2 G6Q sing 109 n n O3P HOP3 G6Q sing 110 n n # _atom_sites.entry_id 1JXA _atom_sites.fract_transf_matrix[1][1] 0.00761 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000854 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008897 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005436 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 G6Q A 1 700 700 G6Q G6P . E 2 G6Q B 1 701 700 G6Q G6P . F 3 HOH A 1 701 1 HOH HOH . F 3 HOH A 2 702 2 HOH HOH . F 3 HOH A 3 703 3 HOH HOH . F 3 HOH A 4 704 5 HOH HOH . F 3 HOH A 5 705 6 HOH HOH . F 3 HOH A 6 706 7 HOH HOH . F 3 HOH A 7 707 8 HOH HOH . F 3 HOH A 8 708 9 HOH HOH . F 3 HOH A 9 709 10 HOH HOH . F 3 HOH A 10 710 11 HOH HOH . F 3 HOH A 11 711 12 HOH HOH . F 3 HOH A 12 712 14 HOH HOH . F 3 HOH A 13 713 15 HOH HOH . F 3 HOH A 14 714 16 HOH HOH . F 3 HOH A 15 715 17 HOH HOH . F 3 HOH A 16 716 18 HOH HOH . F 3 HOH A 17 717 19 HOH HOH . F 3 HOH A 18 718 24 HOH HOH . F 3 HOH A 19 719 29 HOH HOH . F 3 HOH A 20 720 30 HOH HOH . F 3 HOH A 21 721 31 HOH HOH . F 3 HOH A 22 722 32 HOH HOH . F 3 HOH A 23 723 33 HOH HOH . F 3 HOH A 24 724 34 HOH HOH . F 3 HOH A 25 725 35 HOH HOH . F 3 HOH A 26 726 39 HOH HOH . G 3 HOH B 1 702 4 HOH HOH . G 3 HOH B 2 703 13 HOH HOH . G 3 HOH B 3 704 22 HOH HOH . G 3 HOH B 4 705 23 HOH HOH . G 3 HOH B 5 706 25 HOH HOH . G 3 HOH B 6 707 26 HOH HOH . G 3 HOH B 7 708 27 HOH HOH . G 3 HOH B 8 709 36 HOH HOH . G 3 HOH B 9 710 37 HOH HOH . G 3 HOH B 10 711 38 HOH HOH . H 3 HOH C 1 609 20 HOH HOH . H 3 HOH C 2 610 21 HOH HOH . H 3 HOH C 3 611 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 G6Q . . . D 2 -14.115 6.507 5.428 1 30.26 ? C1 G6Q 700 A 1 HETATM 2 C C2 G6Q . . . D 2 -14.435 5.011 5.812 1 34.14 ? C2 G6Q 700 A 1 HETATM 3 C C3 G6Q . . . D 2 -14.877 4.382 4.537 1 36.3 ? C3 G6Q 700 A 1 HETATM 4 C C4 G6Q . . . D 2 -15.272 2.946 4.544 1 31.17 ? C4 G6Q 700 A 1 HETATM 5 C C5 G6Q . . . D 2 -15.129 2.312 3.149 1 27.71 ? C5 G6Q 700 A 1 HETATM 6 C C6 G6Q . . . D 2 -15.612 0.928 3.347 1 28.64 ? C6 G6Q 700 A 1 HETATM 7 O O1 G6Q . . . D 2 -13.158 6.958 6.046 1 32.98 ? O1 G6Q 700 A 1 HETATM 8 O O2 G6Q . . . D 2 -13.112 4.533 6.078 1 28.97 ? O2 G6Q 700 A 1 HETATM 9 O O3 G6Q . . . D 2 -13.762 4.388 3.591 1 34.24 ? O3 G6Q 700 A 1 HETATM 10 O O4 G6Q . . . D 2 -14.516 2.142 5.374 1 25.95 ? O4 G6Q 700 A 1 HETATM 11 O O5 G6Q . . . D 2 -15.791 2.869 2.103 1 29.43 ? O5 G6Q 700 A 1 HETATM 12 O O6 G6Q . . . D 2 -16.993 0.576 3.173 1 31.83 ? O6 G6Q 700 A 1 HETATM 13 P P G6Q . . . D 2 -17.549 -0.569 4.238 1 34.67 ? P G6Q 700 A 1 HETATM 14 O O1P G6Q . . . D 2 -18.857 -0.184 4.862 1 35.9 ? O1P G6Q 700 A 1 HETATM 15 O O2P G6Q . . . D 2 -17.831 -1.756 3.48 1 32.92 ? O2P G6Q 700 A 1 HETATM 16 O O3P G6Q . . . D 2 -16.764 -0.633 5.475 1 29.19 ? O3P G6Q 700 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 16 #