data_1K0Y # _model_server_result.job_id PxTbNItyjdatzwdMHsRccQ _model_server_result.datetime_utc '2024-10-14 06:22:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1k0y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1300}' # _entry.id 1K0Y # _exptl.entry_id 1K0Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.33 _cell.angle_gamma 90 _cell.entry_id 1K0Y _cell.length_a 63.28 _cell.length_b 83.79 _cell.length_c 53.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K0Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 87 A HIS 87 1_555 E FE HEM . A HEM 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc2 B NE2 HIS 92 B HIS 292 1_555 G FE HEM . B HEM 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc3 C NE2 HIS 87 C HIS 487 1_555 H FE HEM . C HEM 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc4 D NE2 HIS 92 D HIS 692 1_555 J FE HEM . D HEM 748 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 425 n n S O2 SO4 doub 426 n n S O3 SO4 sing 427 n n S O4 SO4 sing 428 n n # _atom_sites.entry_id 1K0Y _atom_sites.fract_transf_matrix[1][1] 0.015803 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002596 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011935 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018837 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HEM A 1 143 143 HEM HEM . F 4 SO4 B 1 1400 1400 SO4 SO4 . G 3 HEM B 1 348 348 HEM HEM . H 3 HEM C 1 543 543 HEM HEM . I 4 SO4 D 1 1300 1300 SO4 SO4 . J 3 HEM D 1 748 748 HEM HEM . K 5 CNO D 1 801 801 CNO TBA . L 5 CNO D 1 802 802 CNO TBA . M 6 HOH A 1 901 901 HOH H2O . M 6 HOH A 2 903 903 HOH H2O . M 6 HOH A 3 905 905 HOH H2O . M 6 HOH A 4 906 906 HOH H2O . M 6 HOH A 5 909 909 HOH H2O . M 6 HOH A 6 910 910 HOH H2O . M 6 HOH A 7 913 913 HOH H2O . M 6 HOH A 8 918 918 HOH H2O . M 6 HOH A 9 924 924 HOH H2O . M 6 HOH A 10 925 925 HOH H2O . M 6 HOH A 11 927 927 HOH H2O . M 6 HOH A 12 928 928 HOH H2O . M 6 HOH A 13 933 933 HOH H2O . M 6 HOH A 14 935 935 HOH H2O . M 6 HOH A 15 936 936 HOH H2O . M 6 HOH A 16 938 938 HOH H2O . M 6 HOH A 17 941 941 HOH H2O . M 6 HOH A 18 943 943 HOH H2O . M 6 HOH A 19 944 944 HOH H2O . M 6 HOH A 20 945 945 HOH H2O . M 6 HOH A 21 946 946 HOH H2O . M 6 HOH A 22 962 962 HOH H2O . M 6 HOH A 23 965 965 HOH H2O . M 6 HOH A 24 968 968 HOH H2O . M 6 HOH A 25 975 975 HOH H2O . M 6 HOH A 26 985 985 HOH H2O . M 6 HOH A 27 988 988 HOH H2O . M 6 HOH A 28 992 992 HOH H2O . M 6 HOH A 29 1002 1002 HOH H2O . M 6 HOH A 30 1003 1003 HOH H2O . M 6 HOH A 31 1005 1005 HOH H2O . M 6 HOH A 32 1006 1006 HOH H2O . M 6 HOH A 33 1007 1007 HOH H2O . M 6 HOH A 34 1009 1009 HOH H2O . M 6 HOH A 35 1011 1011 HOH H2O . M 6 HOH A 36 1012 1012 HOH H2O . M 6 HOH A 37 1013 1013 HOH H2O . M 6 HOH A 38 1014 1014 HOH H2O . M 6 HOH A 39 1015 1015 HOH H2O . M 6 HOH A 40 1016 1016 HOH H2O . M 6 HOH A 41 1017 1017 HOH H2O . M 6 HOH A 42 1018 1018 HOH H2O . M 6 HOH A 43 1019 1019 HOH H2O . M 6 HOH A 44 1021 1021 HOH H2O . M 6 HOH A 45 1022 1022 HOH H2O . M 6 HOH A 46 1023 1023 HOH H2O . M 6 HOH A 47 1024 1024 HOH H2O . M 6 HOH A 48 1031 1031 HOH H2O . M 6 HOH A 49 1073 1073 HOH H2O . M 6 HOH A 50 1074 1074 HOH H2O . M 6 HOH A 51 1075 1075 HOH H2O . M 6 HOH A 52 1076 1076 HOH H2O . M 6 HOH A 53 1077 1077 HOH H2O . M 6 HOH A 54 1078 1078 HOH H2O . M 6 HOH A 55 1083 1083 HOH H2O . M 6 HOH A 56 1100 1100 HOH H2O . M 6 HOH A 57 1103 1103 HOH H2O . M 6 HOH A 58 1104 1104 HOH H2O . M 6 HOH A 59 1105 1105 HOH H2O . M 6 HOH A 60 1106 1106 HOH H2O . M 6 HOH A 61 1107 1107 HOH H2O . M 6 HOH A 62 1108 1108 HOH H2O . M 6 HOH A 63 1127 1127 HOH H2O . M 6 HOH A 64 1129 1129 HOH H2O . M 6 HOH A 65 1130 1130 HOH H2O . M 6 HOH A 66 1147 1147 HOH H2O . M 6 HOH A 67 1148 1148 HOH H2O . M 6 HOH A 68 1152 1152 HOH H2O . M 6 HOH A 69 1153 1153 HOH H2O . M 6 HOH A 70 1154 1154 HOH H2O . N 6 HOH B 1 912 912 HOH H2O . N 6 HOH B 2 917 917 HOH H2O . N 6 HOH B 3 920 920 HOH H2O . N 6 HOH B 4 923 923 HOH H2O . N 6 HOH B 5 931 931 HOH H2O . N 6 HOH B 6 942 942 HOH H2O . N 6 HOH B 7 950 950 HOH H2O . N 6 HOH B 8 957 957 HOH H2O . N 6 HOH B 9 960 960 HOH H2O . N 6 HOH B 10 961 961 HOH H2O . N 6 HOH B 11 972 972 HOH H2O . N 6 HOH B 12 973 973 HOH H2O . N 6 HOH B 13 979 979 HOH H2O . N 6 HOH B 14 980 980 HOH H2O . N 6 HOH B 15 981 981 HOH H2O . N 6 HOH B 16 983 983 HOH H2O . N 6 HOH B 17 989 989 HOH H2O . N 6 HOH B 18 990 990 HOH H2O . N 6 HOH B 19 991 991 HOH H2O . N 6 HOH B 20 993 993 HOH H2O . N 6 HOH B 21 995 995 HOH H2O . N 6 HOH B 22 1026 1026 HOH H2O . N 6 HOH B 23 1027 1027 HOH H2O . N 6 HOH B 24 1028 1028 HOH H2O . N 6 HOH B 25 1029 1029 HOH H2O . N 6 HOH B 26 1032 1032 HOH H2O . N 6 HOH B 27 1033 1033 HOH H2O . N 6 HOH B 28 1034 1034 HOH H2O . N 6 HOH B 29 1035 1035 HOH H2O . N 6 HOH B 30 1036 1036 HOH H2O . N 6 HOH B 31 1037 1037 HOH H2O . N 6 HOH B 32 1038 1038 HOH H2O . N 6 HOH B 33 1039 1039 HOH H2O . N 6 HOH B 34 1040 1040 HOH H2O . N 6 HOH B 35 1041 1041 HOH H2O . N 6 HOH B 36 1079 1079 HOH H2O . N 6 HOH B 37 1080 1080 HOH H2O . N 6 HOH B 38 1081 1081 HOH H2O . N 6 HOH B 39 1082 1082 HOH H2O . N 6 HOH B 40 1084 1084 HOH H2O . N 6 HOH B 41 1085 1085 HOH H2O . N 6 HOH B 42 1086 1086 HOH H2O . N 6 HOH B 43 1109 1109 HOH H2O . N 6 HOH B 44 1110 1110 HOH H2O . N 6 HOH B 45 1111 1111 HOH H2O . N 6 HOH B 46 1112 1112 HOH H2O . N 6 HOH B 47 1113 1113 HOH H2O . N 6 HOH B 48 1114 1114 HOH H2O . N 6 HOH B 49 1120 1120 HOH H2O . N 6 HOH B 50 1125 1125 HOH H2O . N 6 HOH B 51 1131 1131 HOH H2O . N 6 HOH B 52 1132 1132 HOH H2O . N 6 HOH B 53 1143 1143 HOH H2O . N 6 HOH B 54 1151 1151 HOH H2O . N 6 HOH B 55 1156 1156 HOH H2O . N 6 HOH B 56 1157 1157 HOH H2O . O 6 HOH C 1 904 904 HOH H2O . O 6 HOH C 2 907 907 HOH H2O . O 6 HOH C 3 911 911 HOH H2O . O 6 HOH C 4 914 914 HOH H2O . O 6 HOH C 5 916 916 HOH H2O . O 6 HOH C 6 919 919 HOH H2O . O 6 HOH C 7 921 921 HOH H2O . O 6 HOH C 8 922 922 HOH H2O . O 6 HOH C 9 930 930 HOH H2O . O 6 HOH C 10 932 932 HOH H2O . O 6 HOH C 11 939 939 HOH H2O . O 6 HOH C 12 949 949 HOH H2O . O 6 HOH C 13 953 953 HOH H2O . O 6 HOH C 14 954 954 HOH H2O . O 6 HOH C 15 955 955 HOH H2O . O 6 HOH C 16 956 956 HOH H2O . O 6 HOH C 17 958 958 HOH H2O . O 6 HOH C 18 959 959 HOH H2O . O 6 HOH C 19 966 966 HOH H2O . O 6 HOH C 20 969 969 HOH H2O . O 6 HOH C 21 970 970 HOH H2O . O 6 HOH C 22 971 971 HOH H2O . O 6 HOH C 23 976 976 HOH H2O . O 6 HOH C 24 977 977 HOH H2O . O 6 HOH C 25 978 978 HOH H2O . O 6 HOH C 26 982 982 HOH H2O . O 6 HOH C 27 986 986 HOH H2O . O 6 HOH C 28 987 987 HOH H2O . O 6 HOH C 29 1004 1004 HOH H2O . O 6 HOH C 30 1008 1008 HOH H2O . O 6 HOH C 31 1030 1030 HOH H2O . O 6 HOH C 32 1042 1042 HOH H2O . O 6 HOH C 33 1043 1043 HOH H2O . O 6 HOH C 34 1044 1044 HOH H2O . O 6 HOH C 35 1045 1045 HOH H2O . O 6 HOH C 36 1046 1046 HOH H2O . O 6 HOH C 37 1047 1047 HOH H2O . O 6 HOH C 38 1048 1048 HOH H2O . O 6 HOH C 39 1049 1049 HOH H2O . O 6 HOH C 40 1050 1050 HOH H2O . O 6 HOH C 41 1051 1051 HOH H2O . O 6 HOH C 42 1052 1052 HOH H2O . O 6 HOH C 43 1053 1053 HOH H2O . O 6 HOH C 44 1054 1054 HOH H2O . O 6 HOH C 45 1055 1055 HOH H2O . O 6 HOH C 46 1056 1056 HOH H2O . O 6 HOH C 47 1057 1057 HOH H2O . O 6 HOH C 48 1058 1058 HOH H2O . O 6 HOH C 49 1061 1061 HOH H2O . O 6 HOH C 50 1087 1087 HOH H2O . O 6 HOH C 51 1088 1088 HOH H2O . O 6 HOH C 52 1089 1089 HOH H2O . O 6 HOH C 53 1090 1090 HOH H2O . O 6 HOH C 54 1091 1091 HOH H2O . O 6 HOH C 55 1092 1092 HOH H2O . O 6 HOH C 56 1093 1093 HOH H2O . O 6 HOH C 57 1094 1094 HOH H2O . O 6 HOH C 58 1095 1095 HOH H2O . O 6 HOH C 59 1096 1096 HOH H2O . O 6 HOH C 60 1097 1097 HOH H2O . O 6 HOH C 61 1098 1098 HOH H2O . O 6 HOH C 62 1099 1099 HOH H2O . O 6 HOH C 63 1115 1115 HOH H2O . O 6 HOH C 64 1133 1133 HOH H2O . O 6 HOH C 65 1134 1134 HOH H2O . O 6 HOH C 66 1135 1135 HOH H2O . O 6 HOH C 67 1136 1136 HOH H2O . O 6 HOH C 68 1137 1137 HOH H2O . O 6 HOH C 69 1145 1145 HOH H2O . O 6 HOH C 70 1146 1146 HOH H2O . O 6 HOH C 71 1149 1149 HOH H2O . P 6 HOH D 1 902 902 HOH H2O . P 6 HOH D 2 908 908 HOH H2O . P 6 HOH D 3 915 915 HOH H2O . P 6 HOH D 4 926 926 HOH H2O . P 6 HOH D 5 929 929 HOH H2O . P 6 HOH D 6 934 934 HOH H2O . P 6 HOH D 7 937 937 HOH H2O . P 6 HOH D 8 940 940 HOH H2O . P 6 HOH D 9 947 947 HOH H2O . P 6 HOH D 10 948 948 HOH H2O . P 6 HOH D 11 951 951 HOH H2O . P 6 HOH D 12 952 952 HOH H2O . P 6 HOH D 13 963 963 HOH H2O . P 6 HOH D 14 964 964 HOH H2O . P 6 HOH D 15 967 967 HOH H2O . P 6 HOH D 16 974 974 HOH H2O . P 6 HOH D 17 984 984 HOH H2O . P 6 HOH D 18 994 994 HOH H2O . P 6 HOH D 19 996 996 HOH H2O . P 6 HOH D 20 997 997 HOH H2O . P 6 HOH D 21 998 998 HOH H2O . P 6 HOH D 22 999 999 HOH H2O . P 6 HOH D 23 1000 1000 HOH H2O . P 6 HOH D 24 1001 1001 HOH H2O . P 6 HOH D 25 1010 1010 HOH H2O . P 6 HOH D 26 1020 1020 HOH H2O . P 6 HOH D 27 1025 1025 HOH H2O . P 6 HOH D 28 1059 1059 HOH H2O . P 6 HOH D 29 1060 1060 HOH H2O . P 6 HOH D 30 1062 1062 HOH H2O . P 6 HOH D 31 1063 1063 HOH H2O . P 6 HOH D 32 1064 1064 HOH H2O . P 6 HOH D 33 1065 1065 HOH H2O . P 6 HOH D 34 1066 1066 HOH H2O . P 6 HOH D 35 1067 1067 HOH H2O . P 6 HOH D 36 1068 1068 HOH H2O . P 6 HOH D 37 1069 1069 HOH H2O . P 6 HOH D 38 1070 1070 HOH H2O . P 6 HOH D 39 1071 1071 HOH H2O . P 6 HOH D 40 1072 1072 HOH H2O . P 6 HOH D 41 1101 1101 HOH H2O . P 6 HOH D 42 1102 1102 HOH H2O . P 6 HOH D 43 1116 1116 HOH H2O . P 6 HOH D 44 1117 1117 HOH H2O . P 6 HOH D 45 1118 1118 HOH H2O . P 6 HOH D 46 1119 1119 HOH H2O . P 6 HOH D 47 1121 1121 HOH H2O . P 6 HOH D 48 1122 1122 HOH H2O . P 6 HOH D 49 1123 1123 HOH H2O . P 6 HOH D 50 1124 1124 HOH H2O . P 6 HOH D 51 1126 1126 HOH H2O . P 6 HOH D 52 1128 1128 HOH H2O . P 6 HOH D 53 1138 1138 HOH H2O . P 6 HOH D 54 1139 1139 HOH H2O . P 6 HOH D 55 1140 1140 HOH H2O . P 6 HOH D 56 1141 1141 HOH H2O . P 6 HOH D 57 1142 1142 HOH H2O . P 6 HOH D 58 1144 1144 HOH H2O . P 6 HOH D 59 1150 1150 HOH H2O . P 6 HOH D 60 1155 1155 HOH H2O . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . I 4 0.278 -6.462 38.877 1 69.77 ? S SO4 1300 D 1 HETATM 2 O O1 SO4 . . . I 4 -0.711 -7.152 39.767 1 69.11 ? O1 SO4 1300 D 1 HETATM 3 O O2 SO4 . . . I 4 0.188 -6.954 37.467 1 68.15 ? O2 SO4 1300 D 1 HETATM 4 O O3 SO4 . . . I 4 1.647 -6.679 39.443 1 65.88 ? O3 SO4 1300 D 1 HETATM 5 O O4 SO4 . . . I 4 -0.043 -5.005 38.994 1 65.75 ? O4 SO4 1300 D 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 5 #