data_1K68 # _model_server_result.job_id enkolAcZesCqsTc4JCmaPg _model_server_result.datetime_utc '2024-11-29 13:24:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1k68 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 1K68 # _exptl.entry_id 1K68 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1K68 _cell.length_a 76.7 _cell.length_b 85.16 _cell.length_c 44.05 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K68 _symmetry.cell_setting orthorhombic _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 61 A LEU 69 1_555 A N PHD 62 A PHD 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale2 A C PHD 62 A PHD 70 1_555 A N LEU 63 A LEU 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? metalc ? metalc1 C MG MG . A MG 501 1_555 A OP2 PHD 62 A PHD 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? metalc ? metalc2 C MG MG . A MG 501 1_555 A OD1 ASP 10 A ASP 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? metalc ? metalc3 C MG MG . A MG 501 1_555 A OD2 PHD 62 A PHD 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc4 C MG MG . A MG 501 1_555 E O HOH . A HOH 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc5 C MG MG . A MG 501 1_555 E O HOH . A HOH 553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc6 C MG MG . A MG 501 1_555 A O ASN 64 A ASN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? covale ? covale3 B C LEU 61 B LEU 69 1_555 B N PHD 62 B PHD 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 B C PHD 62 B PHD 70 1_555 B N LEU 63 B LEU 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? metalc ? metalc7 D MG MG . B MG 502 1_555 B OD1 ASP 10 B ASP 18 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc8 D MG MG . B MG 502 1_555 B OD2 PHD 62 B PHD 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc9 D MG MG . B MG 502 1_555 B OP2 PHD 62 B PHD 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.505 ? metalc ? metalc10 D MG MG . B MG 502 1_555 B O ASN 64 B ASN 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 1K68 _atom_sites.fract_transf_matrix[1][1] 0.013038 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011743 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022701 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 501 501 MG MG . D 2 MG B 1 502 502 MG MG . E 3 HOH A 1 502 9 HOH HOH . E 3 HOH A 2 503 10 HOH HOH . E 3 HOH A 3 504 12 HOH HOH . E 3 HOH A 4 505 15 HOH HOH . E 3 HOH A 5 506 18 HOH HOH . E 3 HOH A 6 507 20 HOH HOH . E 3 HOH A 7 508 22 HOH HOH . E 3 HOH A 8 509 23 HOH HOH . E 3 HOH A 9 510 24 HOH HOH . E 3 HOH A 10 511 27 HOH HOH . E 3 HOH A 11 512 28 HOH HOH . E 3 HOH A 12 513 29 HOH HOH . E 3 HOH A 13 514 30 HOH HOH . E 3 HOH A 14 515 33 HOH HOH . E 3 HOH A 15 516 35 HOH HOH . E 3 HOH A 16 517 39 HOH HOH . E 3 HOH A 17 518 42 HOH HOH . E 3 HOH A 18 519 43 HOH HOH . E 3 HOH A 19 520 44 HOH HOH . E 3 HOH A 20 521 45 HOH HOH . E 3 HOH A 21 522 46 HOH HOH . E 3 HOH A 22 523 47 HOH HOH . E 3 HOH A 23 524 49 HOH HOH . E 3 HOH A 24 525 50 HOH HOH . E 3 HOH A 25 526 51 HOH HOH . E 3 HOH A 26 527 52 HOH HOH . E 3 HOH A 27 528 53 HOH HOH . E 3 HOH A 28 529 54 HOH HOH . E 3 HOH A 29 530 55 HOH HOH . E 3 HOH A 30 531 56 HOH HOH . E 3 HOH A 31 532 65 HOH HOH . E 3 HOH A 32 533 67 HOH HOH . E 3 HOH A 33 534 72 HOH HOH . E 3 HOH A 34 535 75 HOH HOH . E 3 HOH A 35 536 76 HOH HOH . E 3 HOH A 36 537 79 HOH HOH . E 3 HOH A 37 538 80 HOH HOH . E 3 HOH A 38 539 81 HOH HOH . E 3 HOH A 39 540 84 HOH HOH . E 3 HOH A 40 541 85 HOH HOH . E 3 HOH A 41 542 86 HOH HOH . E 3 HOH A 42 543 87 HOH HOH . E 3 HOH A 43 544 88 HOH HOH . E 3 HOH A 44 545 89 HOH HOH . E 3 HOH A 45 546 90 HOH HOH . E 3 HOH A 46 547 91 HOH HOH . E 3 HOH A 47 548 92 HOH HOH . E 3 HOH A 48 549 94 HOH HOH . E 3 HOH A 49 550 96 HOH HOH . E 3 HOH A 50 551 102 HOH HOH . E 3 HOH A 51 552 103 HOH HOH . E 3 HOH A 52 553 106 HOH HOH . E 3 HOH A 53 554 110 HOH HOH . E 3 HOH A 54 555 111 HOH HOH . E 3 HOH A 55 556 112 HOH HOH . E 3 HOH A 56 557 113 HOH HOH . E 3 HOH A 57 558 114 HOH HOH . E 3 HOH A 58 559 115 HOH HOH . F 3 HOH B 1 503 3 HOH HOH . F 3 HOH B 2 504 4 HOH HOH . F 3 HOH B 3 505 5 HOH HOH . F 3 HOH B 4 506 6 HOH HOH . F 3 HOH B 5 507 7 HOH HOH . F 3 HOH B 6 508 8 HOH HOH . F 3 HOH B 7 509 11 HOH HOH . F 3 HOH B 8 510 13 HOH HOH . F 3 HOH B 9 511 14 HOH HOH . F 3 HOH B 10 512 16 HOH HOH . F 3 HOH B 11 513 17 HOH HOH . F 3 HOH B 12 514 19 HOH HOH . F 3 HOH B 13 515 21 HOH HOH . F 3 HOH B 14 516 25 HOH HOH . F 3 HOH B 15 517 26 HOH HOH . F 3 HOH B 16 518 31 HOH HOH . F 3 HOH B 17 519 32 HOH HOH . F 3 HOH B 18 520 34 HOH HOH . F 3 HOH B 19 521 36 HOH HOH . F 3 HOH B 20 522 37 HOH HOH . F 3 HOH B 21 523 38 HOH HOH . F 3 HOH B 22 524 40 HOH HOH . F 3 HOH B 23 525 41 HOH HOH . F 3 HOH B 24 526 48 HOH HOH . F 3 HOH B 25 527 57 HOH HOH . F 3 HOH B 26 528 58 HOH HOH . F 3 HOH B 27 529 59 HOH HOH . F 3 HOH B 28 530 60 HOH HOH . F 3 HOH B 29 531 61 HOH HOH . F 3 HOH B 30 532 62 HOH HOH . F 3 HOH B 31 533 63 HOH HOH . F 3 HOH B 32 534 64 HOH HOH . F 3 HOH B 33 535 66 HOH HOH . F 3 HOH B 34 536 68 HOH HOH . F 3 HOH B 35 537 69 HOH HOH . F 3 HOH B 36 538 70 HOH HOH . F 3 HOH B 37 539 71 HOH HOH . F 3 HOH B 38 540 73 HOH HOH . F 3 HOH B 39 541 74 HOH HOH . F 3 HOH B 40 542 77 HOH HOH . F 3 HOH B 41 543 78 HOH HOH . F 3 HOH B 42 544 82 HOH HOH . F 3 HOH B 43 545 83 HOH HOH . F 3 HOH B 44 546 93 HOH HOH . F 3 HOH B 45 547 95 HOH HOH . F 3 HOH B 46 548 97 HOH HOH . F 3 HOH B 47 549 98 HOH HOH . F 3 HOH B 48 550 99 HOH HOH . F 3 HOH B 49 551 100 HOH HOH . F 3 HOH B 50 552 101 HOH HOH . F 3 HOH B 51 553 104 HOH HOH . F 3 HOH B 52 554 105 HOH HOH . F 3 HOH B 53 555 107 HOH HOH . F 3 HOH B 54 556 108 HOH HOH . F 3 HOH B 55 557 109 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 45.679 _atom_site.Cartn_y 24.097 _atom_site.Cartn_z 28.788 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 72.84 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 436 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #