data_1K6R # _model_server_result.job_id MKPpazhCyTLzZkuzhOd-WA _model_server_result.datetime_utc '2024-11-18 00:27:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 1k6r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":300}' # _entry.id 1K6R # _exptl.entry_id 1K6R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 422.343 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-((R)-CARBOXY{[CARBOXY(4-HYDROXYPHENYL)ACETYL]AMINO}METHOXYMETHYL)-5-METHYLENE-5,6-DIHYDRO-2H-1,3-OXAZINE-4-CARBO XYLIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 1K6R _cell.length_a 48.706 _cell.length_b 96.003 _cell.length_c 125.195 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1K6R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 44 1_555 A SG CYS 33 A CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf2 B SG CYS 26 B CYS 44 1_555 B SG CYS 33 B CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? covale ? covale1 A OG SER 49 A SER 67 1_555 C C1 MX1 . A MX1 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.367 ? covale ? covale2 B OG SER 49 B SER 67 1_555 D C1 MX1 . B MX1 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.363 ? # _chem_comp.formula 'C18 H18 N2 O10' _chem_comp.formula_weight 422.343 _chem_comp.id MX1 _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-((R)-CARBOXY{[CARBOXY(4-HYDROXYPHENYL)ACETYL]AMINO}METHOXYMETHYL)-5-METHYLENE-5,6-DIHYDRO-2H-1,3-OXAZINE-4-CARBO XYLIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'MOXALACTAM (HYDROLYZED)' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 C7 MX1 sing 237 n n O4 HO4 MX1 sing 238 n n C7 O3 MX1 doub 239 n n C7 C4 MX1 sing 240 n n C4 N1 MX1 doub 241 n n C4 C5 MX1 sing 242 n n N1 C3 MX1 sing 243 n n C5 C8 MX1 doub 244 n n C5 C6 MX1 sing 245 n n C8 H81 MX1 sing 246 n n C8 H82 MX1 sing 247 n n C6 O2 MX1 sing 248 n n C6 H61 MX1 sing 249 n n C6 H62 MX1 sing 250 n n O2 C3 MX1 sing 251 n n C3 C2 MX1 sing 252 n n C3 H3 MX1 sing 253 n n C2 C1 MX1 sing 254 n n C2 O5 MX1 sing 255 n n C2 N2 MX1 sing 256 n n C1 O32 MX1 sing 257 n n C1 O31 MX1 doub 258 n n O32 H32 MX1 sing 259 n n O5 C9 MX1 sing 260 n n C9 H91 MX1 sing 261 n n C9 H92 MX1 sing 262 n n C9 H93 MX1 sing 263 n n N2 C10 MX1 sing 264 n n N2 HN2 MX1 sing 265 n n C10 O6 MX1 doub 266 n n C10 C11 MX1 sing 267 n n C11 C12 MX1 sing 268 n n C11 C13 MX1 sing 269 n n C11 H11 MX1 sing 270 n n C12 O8 MX1 sing 271 n n C12 O7 MX1 doub 272 n n O8 HO8 MX1 sing 273 n n C13 C14 MX1 sing 274 n y C13 C18 MX1 doub 275 n y C14 C15 MX1 doub 276 n y C14 H14 MX1 sing 277 n n C18 C17 MX1 sing 278 n y C18 H18 MX1 sing 279 n n C17 C16 MX1 doub 280 n y C17 H17 MX1 sing 281 n n C16 O9 MX1 sing 282 n n C16 C15 MX1 sing 283 n y O9 HO9 MX1 sing 284 n n C15 H15 MX1 sing 285 n n # _atom_sites.entry_id 1K6R _atom_sites.fract_transf_matrix[1][1] 0.020531 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010416 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007988 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MX1 A 1 300 300 MX1 MX1 . D 2 MX1 B 1 300 300 MX1 MX1 . E 3 HOH A 1 301 1 HOH HOH . E 3 HOH A 2 302 2 HOH HOH . E 3 HOH A 3 303 3 HOH HOH . E 3 HOH A 4 304 4 HOH HOH . E 3 HOH A 5 305 5 HOH HOH . E 3 HOH A 6 306 6 HOH HOH . E 3 HOH A 7 307 7 HOH HOH . E 3 HOH A 8 308 8 HOH HOH . E 3 HOH A 9 309 9 HOH HOH . E 3 HOH A 10 310 10 HOH HOH . E 3 HOH A 11 311 11 HOH HOH . E 3 HOH A 12 312 12 HOH HOH . E 3 HOH A 13 313 13 HOH HOH . E 3 HOH A 14 314 14 HOH HOH . E 3 HOH A 15 315 15 HOH HOH . E 3 HOH A 16 316 16 HOH HOH . E 3 HOH A 17 317 17 HOH HOH . E 3 HOH A 18 318 18 HOH HOH . E 3 HOH A 19 319 19 HOH HOH . E 3 HOH A 20 320 20 HOH HOH . E 3 HOH A 21 321 21 HOH HOH . E 3 HOH A 22 322 22 HOH HOH . E 3 HOH A 23 323 23 HOH HOH . E 3 HOH A 24 324 24 HOH HOH . E 3 HOH A 25 325 25 HOH HOH . E 3 HOH A 26 326 26 HOH HOH . E 3 HOH A 27 327 27 HOH HOH . E 3 HOH A 28 328 28 HOH HOH . E 3 HOH A 29 329 29 HOH HOH . E 3 HOH A 30 330 30 HOH HOH . E 3 HOH A 31 331 31 HOH HOH . E 3 HOH A 32 332 32 HOH HOH . E 3 HOH A 33 333 33 HOH HOH . E 3 HOH A 34 334 34 HOH HOH . E 3 HOH A 35 335 35 HOH HOH . E 3 HOH A 36 336 36 HOH HOH . E 3 HOH A 37 337 37 HOH HOH . E 3 HOH A 38 338 38 HOH HOH . E 3 HOH A 39 339 39 HOH HOH . E 3 HOH A 40 340 40 HOH HOH . E 3 HOH A 41 341 42 HOH HOH . E 3 HOH A 42 342 45 HOH HOH . E 3 HOH A 43 343 47 HOH HOH . E 3 HOH A 44 344 49 HOH HOH . E 3 HOH A 45 345 63 HOH HOH . E 3 HOH A 46 346 65 HOH HOH . E 3 HOH A 47 347 66 HOH HOH . E 3 HOH A 48 348 67 HOH HOH . E 3 HOH A 49 349 68 HOH HOH . E 3 HOH A 50 350 69 HOH HOH . E 3 HOH A 51 351 70 HOH HOH . E 3 HOH A 52 352 72 HOH HOH . E 3 HOH A 53 353 73 HOH HOH . E 3 HOH A 54 354 74 HOH HOH . E 3 HOH A 55 355 75 HOH HOH . E 3 HOH A 56 356 76 HOH HOH . E 3 HOH A 57 357 77 HOH HOH . E 3 HOH A 58 358 78 HOH HOH . E 3 HOH A 59 359 79 HOH HOH . E 3 HOH A 60 360 80 HOH HOH . E 3 HOH A 61 361 81 HOH HOH . E 3 HOH A 62 362 82 HOH HOH . E 3 HOH A 63 363 83 HOH HOH . E 3 HOH A 64 364 84 HOH HOH . E 3 HOH A 65 365 85 HOH HOH . E 3 HOH A 66 366 86 HOH HOH . E 3 HOH A 67 367 88 HOH HOH . E 3 HOH A 68 368 89 HOH HOH . E 3 HOH A 69 369 90 HOH HOH . E 3 HOH A 70 370 91 HOH HOH . E 3 HOH A 71 371 97 HOH HOH . E 3 HOH A 72 372 100 HOH HOH . E 3 HOH A 73 373 101 HOH HOH . E 3 HOH A 74 374 102 HOH HOH . E 3 HOH A 75 375 104 HOH HOH . E 3 HOH A 76 376 105 HOH HOH . E 3 HOH A 77 377 106 HOH HOH . E 3 HOH A 78 378 107 HOH HOH . E 3 HOH A 79 379 108 HOH HOH . E 3 HOH A 80 380 109 HOH HOH . E 3 HOH A 81 381 110 HOH HOH . E 3 HOH A 82 382 111 HOH HOH . E 3 HOH A 83 383 112 HOH HOH . E 3 HOH A 84 384 113 HOH HOH . E 3 HOH A 85 385 114 HOH HOH . E 3 HOH A 86 386 115 HOH HOH . E 3 HOH A 87 387 116 HOH HOH . E 3 HOH A 88 388 118 HOH HOH . E 3 HOH A 89 389 120 HOH HOH . E 3 HOH A 90 390 123 HOH HOH . E 3 HOH A 91 391 133 HOH HOH . E 3 HOH A 92 392 135 HOH HOH . E 3 HOH A 93 393 136 HOH HOH . E 3 HOH A 94 394 137 HOH HOH . E 3 HOH A 95 395 138 HOH HOH . E 3 HOH A 96 396 139 HOH HOH . E 3 HOH A 97 397 140 HOH HOH . E 3 HOH A 98 398 141 HOH HOH . E 3 HOH A 99 399 142 HOH HOH . E 3 HOH A 100 400 143 HOH HOH . E 3 HOH A 101 401 144 HOH HOH . E 3 HOH A 102 402 154 HOH HOH . E 3 HOH A 103 403 155 HOH HOH . E 3 HOH A 104 404 156 HOH HOH . E 3 HOH A 105 405 157 HOH HOH . E 3 HOH A 106 406 158 HOH HOH . E 3 HOH A 107 407 160 HOH HOH . E 3 HOH A 108 408 162 HOH HOH . E 3 HOH A 109 409 166 HOH HOH . E 3 HOH A 110 410 167 HOH HOH . E 3 HOH A 111 411 168 HOH HOH . E 3 HOH A 112 412 169 HOH HOH . E 3 HOH A 113 413 172 HOH HOH . E 3 HOH A 114 414 173 HOH HOH . E 3 HOH A 115 415 176 HOH HOH . E 3 HOH A 116 416 177 HOH HOH . E 3 HOH A 117 417 178 HOH HOH . E 3 HOH A 118 418 179 HOH HOH . E 3 HOH A 119 419 180 HOH HOH . E 3 HOH A 120 420 181 HOH HOH . E 3 HOH A 121 421 182 HOH HOH . E 3 HOH A 122 422 183 HOH HOH . F 3 HOH B 1 301 41 HOH HOH . F 3 HOH B 2 302 43 HOH HOH . F 3 HOH B 3 303 44 HOH HOH . F 3 HOH B 4 304 46 HOH HOH . F 3 HOH B 5 305 48 HOH HOH . F 3 HOH B 6 306 50 HOH HOH . F 3 HOH B 7 307 51 HOH HOH . F 3 HOH B 8 308 52 HOH HOH . F 3 HOH B 9 309 53 HOH HOH . F 3 HOH B 10 310 54 HOH HOH . F 3 HOH B 11 311 55 HOH HOH . F 3 HOH B 12 312 56 HOH HOH . F 3 HOH B 13 313 57 HOH HOH . F 3 HOH B 14 314 58 HOH HOH . F 3 HOH B 15 315 59 HOH HOH . F 3 HOH B 16 316 60 HOH HOH . F 3 HOH B 17 317 61 HOH HOH . F 3 HOH B 18 318 62 HOH HOH . F 3 HOH B 19 319 64 HOH HOH . F 3 HOH B 20 320 71 HOH HOH . F 3 HOH B 21 321 87 HOH HOH . F 3 HOH B 22 322 92 HOH HOH . F 3 HOH B 23 323 93 HOH HOH . F 3 HOH B 24 324 94 HOH HOH . F 3 HOH B 25 325 95 HOH HOH . F 3 HOH B 26 326 96 HOH HOH . F 3 HOH B 27 327 98 HOH HOH . F 3 HOH B 28 328 99 HOH HOH . F 3 HOH B 29 329 103 HOH HOH . F 3 HOH B 30 330 117 HOH HOH . F 3 HOH B 31 331 119 HOH HOH . F 3 HOH B 32 332 121 HOH HOH . F 3 HOH B 33 333 122 HOH HOH . F 3 HOH B 34 334 124 HOH HOH . F 3 HOH B 35 335 125 HOH HOH . F 3 HOH B 36 336 126 HOH HOH . F 3 HOH B 37 337 127 HOH HOH . F 3 HOH B 38 338 128 HOH HOH . F 3 HOH B 39 339 129 HOH HOH . F 3 HOH B 40 340 130 HOH HOH . F 3 HOH B 41 341 131 HOH HOH . F 3 HOH B 42 342 132 HOH HOH . F 3 HOH B 43 343 134 HOH HOH . F 3 HOH B 44 344 145 HOH HOH . F 3 HOH B 45 345 146 HOH HOH . F 3 HOH B 46 346 147 HOH HOH . F 3 HOH B 47 347 148 HOH HOH . F 3 HOH B 48 348 149 HOH HOH . F 3 HOH B 49 349 150 HOH HOH . F 3 HOH B 50 350 151 HOH HOH . F 3 HOH B 51 351 152 HOH HOH . F 3 HOH B 52 352 153 HOH HOH . F 3 HOH B 53 353 159 HOH HOH . F 3 HOH B 54 354 161 HOH HOH . F 3 HOH B 55 355 163 HOH HOH . F 3 HOH B 56 356 164 HOH HOH . F 3 HOH B 57 357 165 HOH HOH . F 3 HOH B 58 358 170 HOH HOH . F 3 HOH B 59 359 171 HOH HOH . F 3 HOH B 60 360 174 HOH HOH . F 3 HOH B 61 361 175 HOH HOH . F 3 HOH B 62 362 184 HOH HOH . F 3 HOH B 63 363 185 HOH HOH . F 3 HOH B 64 364 186 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 MX1 . . . D 2 17.211 -18.879 84.093 1 55.53 ? O4 MX1 300 B 1 HETATM 2 C C7 MX1 . . . D 2 17.155 -18.899 82.843 1 58.59 ? C7 MX1 300 B 1 HETATM 3 O O3 MX1 . . . D 2 18.127 -18.464 82.191 1 58.22 ? O3 MX1 300 B 1 HETATM 4 C C4 MX1 . . . D 2 15.928 -19.446 82.177 1 59.94 ? C4 MX1 300 B 1 HETATM 5 N N1 MX1 . . . D 2 15.003 -20.04 83.056 1 60.3 ? N1 MX1 300 B 1 HETATM 6 C C5 MX1 . . . D 2 15.707 -19.38 80.802 1 60.28 ? C5 MX1 300 B 1 HETATM 7 C C8 MX1 . . . D 2 16.611 -18.787 79.802 1 61.12 ? C8 MX1 300 B 1 HETATM 8 C C6 MX1 . . . D 2 14.432 -19.97 80.264 1 60.85 ? C6 MX1 300 B 1 HETATM 9 O O2 MX1 . . . D 2 13.369 -20.05 81.233 1 60.99 ? O2 MX1 300 B 1 HETATM 10 C C3 MX1 . . . D 2 13.763 -20.604 82.521 1 61 ? C3 MX1 300 B 1 HETATM 11 C C2 MX1 . . . D 2 12.505 -20.316 83.473 1 61.16 ? C2 MX1 300 B 1 HETATM 12 C C1 MX1 . . . D 2 12.493 -18.767 83.721 1 59.4 ? C1 MX1 300 B 1 HETATM 13 O O31 MX1 . . . D 2 12.13 -17.924 82.891 1 58.68 ? O31 MX1 300 B 1 HETATM 14 O O5 MX1 . . . D 2 12.78 -21.132 84.664 1 62.2 ? O5 MX1 300 B 1 HETATM 15 C C9 MX1 . . . D 2 13.859 -20.835 85.566 1 64.07 ? C9 MX1 300 B 1 HETATM 16 N N2 MX1 . . . D 2 11.273 -20.728 82.813 1 63.51 ? N2 MX1 300 B 1 HETATM 17 C C10 MX1 . . . D 2 10.017 -20.661 83.402 1 66.88 ? C10 MX1 300 B 1 HETATM 18 O O6 MX1 . . . D 2 9.842 -20.334 84.593 1 65.19 ? O6 MX1 300 B 1 HETATM 19 C C11 MX1 . . . D 2 8.806 -20.996 82.531 1 71.14 ? C11 MX1 300 B 1 HETATM 20 C C12 MX1 . . . D 2 7.752 -19.931 82.719 1 72.93 ? C12 MX1 300 B 1 HETATM 21 O O8 MX1 . . . D 2 7.219 -19.755 83.837 1 73.73 ? O8 MX1 300 B 1 HETATM 22 O O7 MX1 . . . D 2 7.417 -19.203 81.759 1 74.59 ? O7 MX1 300 B 1 HETATM 23 C C13 MX1 . . . D 2 8.274 -22.365 82.876 1 73.32 ? C13 MX1 300 B 1 HETATM 24 C C14 MX1 . . . D 2 8.884 -23.516 82.372 1 74.85 ? C14 MX1 300 B 1 HETATM 25 C C18 MX1 . . . D 2 7.162 -22.524 83.709 1 74.19 ? C18 MX1 300 B 1 HETATM 26 C C17 MX1 . . . D 2 6.673 -23.789 84.03 1 74.96 ? C17 MX1 300 B 1 HETATM 27 C C16 MX1 . . . D 2 7.296 -24.914 83.518 1 75.03 ? C16 MX1 300 B 1 HETATM 28 O O9 MX1 . . . D 2 6.817 -26.162 83.839 1 75.16 ? O9 MX1 300 B 1 HETATM 29 C C15 MX1 . . . D 2 8.4 -24.788 82.689 1 75.16 ? C15 MX1 300 B 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 29 #